1
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Sun A, He X, Jiang Z, Kong Y, Wang S, Liu C. Phase flow cytometry with coherent modulation imaging. JOURNAL OF BIOPHOTONICS 2023:e202300057. [PMID: 37039822 DOI: 10.1002/jbio.202300057] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/20/2023] [Revised: 03/27/2023] [Accepted: 04/05/2023] [Indexed: 06/19/2023]
Abstract
Label-free imaging and identification of fast-moving cells is a very challenging task. A kind of phase flow cytometry using coherent modulation imaging was proposed to realize label-free imaging and identification on fast-moving cells with compact optical alignment and high accuracy. Phase image of cells under inspection could be computed qualitatively from their diffraction patterns at the accuracy of about 0.01 wavelength and the resolution of about 1.23 μm and the view field of 0.126 mm2 . Since the imaging system was mainly composed by a piece of random phase plate a detector without using commonly adopted reference beam and corresponding complex optical alignment, this method has much compacter optical structure and much higher tolerance capability to environmental instability in comparison with other kinds of phase flow cytometry. Current experimental results prove it could be an efficient optical tool for label-free tumor cell detection.
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Affiliation(s)
- Aihui Sun
- Department of Optoelectronic Information Science and Engineering, School of Science, Jiangnan University, Wuxi, Jiangsu, China
| | - Xiaoliang He
- Department of Optoelectronic Information Science and Engineering, School of Science, Jiangnan University, Wuxi, Jiangsu, China
| | - Zhilong Jiang
- Department of Optoelectronic Information Science and Engineering, School of Science, Jiangnan University, Wuxi, Jiangsu, China
| | - Yan Kong
- Department of Optoelectronic Information Science and Engineering, School of Science, Jiangnan University, Wuxi, Jiangsu, China
| | - Shouyu Wang
- Department of Optoelectronic Information Science and Engineering, School of Science, Jiangnan University, Wuxi, Jiangsu, China
| | - Cheng Liu
- Department of Optoelectronic Information Science and Engineering, School of Science, Jiangnan University, Wuxi, Jiangsu, China
- Shanghai Institute of Optics and Fine Mechanics, Chinese Academy of Sciences, Shanghai, China
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2
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Valentino M, Sirico DG, Memmolo P, Miccio L, Bianco V, Ferraro P. Digital holographic approaches to the detection and characterization of microplastics in water environments. APPLIED OPTICS 2023; 62:D104-D118. [PMID: 37132775 DOI: 10.1364/ao.478700] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/04/2023]
Abstract
Microplastic (MP) pollution is seriously threatening the environmental health of the world, which has accelerated the development of new identification and characterization methods. Digital holography (DH) is one of the emerging tools to detect MPs in a high-throughput flow. Here, we review advances in MP screening by DH. We examine the problem from both the hardware and software viewpoints. Automatic analysis based on smart DH processing is reported by highlighting the role played by artificial intelligence for classification and regression tasks. In this framework, the continuous development and availability in recent years of field-portable holographic flow cytometers for water monitoring also is discussed.
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3
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Arcab P, Mirecki B, Stefaniuk M, Pawłowska M, Trusiak M. Experimental optimization of lensless digital holographic microscopy with rotating diffuser-based coherent noise reduction. OPTICS EXPRESS 2022; 30:42810-42828. [PMID: 36522993 DOI: 10.1364/oe.470860] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/22/2022] [Accepted: 09/23/2022] [Indexed: 06/17/2023]
Abstract
Laser-based lensless digital holographic microscopy (LDHM) is often spoiled by considerable coherent noise factor. We propose a novel LDHM method with significantly limited coherent artifacts, e.g., speckle noise and parasitic interference fringes. It is achieved by incorporating a rotating diffuser, which introduces partial spatial coherence and preserves high temporal coherence of laser light, crucial for credible in-line hologram reconstruction. We present the first implementation of the classical rotating diffuser concept in LDHM, significantly increasing the signal-to-noise ratio while preserving the straightforwardness and compactness of the LDHM imaging device. Prior to the introduction of the rotating diffusor, we performed LDHM experimental hardware optimization employing 4 light sources, 4 cameras, and 3 different optical magnifications (camera-sample distances). It was guided by the quantitative assessment of numerical amplitude/phase reconstruction of test targets, conducted upon standard deviation calculation (noise factor quantification), and resolution evaluation (information throughput quantification). Optimized rotating diffuser LDHM (RD-LDHM) method was successfully corroborated in technical test target imaging and examination of challenging biomedical sample (60 µm thick mouse brain tissue slice). Physical minimization of coherent noise (up to 50%) was positively verified, while preserving optimal spatial resolution of phase and amplitude imaging. Coherent noise removal, ensured by proposed RD-LDHM method, is especially important in biomedical inference, as speckles can falsely imitate valid biological features. Combining this favorable outcome with large field-of-view imaging can promote the use of reported RD-LDHM technique in high-throughput stain-free biomedical screening.
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4
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Ghosh A, Kulkarni R, Mondal PK. Autofocusing in digital holography using eigenvalues. APPLIED OPTICS 2021; 60:1031-1040. [PMID: 33690417 DOI: 10.1364/ao.414672] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/10/2020] [Accepted: 01/03/2021] [Indexed: 06/12/2023]
Abstract
A new autofocusing algorithm for digital holography is proposed based on the eigenvalues of the images reconstructed at different distances in the measurement volume. An image quality metric evaluated based on the distribution of its eigenvalues is compared in function of the reconstruction distance to identify the location of the focal plane. The proposed automatic focal plane detection algorithm is capable of working with amplitude objects, phase objects, and mixed type objects. A performance comparison of the proposed algorithm with some previously reported representative algorithms is provided. The simulation and experimental results demonstrate the practical applicability of the proposed algorithm.
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5
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Miccio L, Cimmino F, Kurelac I, Villone MM, Bianco V, Memmolo P, Merola F, Mugnano M, Capasso M, Iolascon A, Maffettone PL, Ferraro P. Perspectives on liquid biopsy for label‐free detection of “circulating tumor cells” through intelligent lab‐on‐chips. VIEW 2020. [DOI: 10.1002/viw.20200034] [Citation(s) in RCA: 42] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022] Open
Affiliation(s)
- Lisa Miccio
- CNR‐ISASI Institute of Applied Sciences and Intelligent Systems E. Caianiello Pozzuoli Italy
- NEAPoLIS, Numerical and Experimental Advanced Program on Liquids and Interface Systems Joint Research Center CNR ‐ Università degli Studi di Napoli “Federico II” Napoli Italy
| | | | - Ivana Kurelac
- Dipartimento di Scienze Mediche e Chirurgiche Università di Bologna Bologna Italy
- Centro di Ricerca Biomedica Applicata (CRBA) Università di Bologna Bologna Italy
| | - Massimiliano M. Villone
- Dipartimento di Ingegneria Chimica dei Materiali e della Produzione Industriale Università degli Studi di Napoli “Federico II” Napoli Italy
- NEAPoLIS, Numerical and Experimental Advanced Program on Liquids and Interface Systems Joint Research Center CNR ‐ Università degli Studi di Napoli “Federico II” Napoli Italy
| | - Vittorio Bianco
- CNR‐ISASI Institute of Applied Sciences and Intelligent Systems E. Caianiello Pozzuoli Italy
- NEAPoLIS, Numerical and Experimental Advanced Program on Liquids and Interface Systems Joint Research Center CNR ‐ Università degli Studi di Napoli “Federico II” Napoli Italy
| | - Pasquale Memmolo
- CNR‐ISASI Institute of Applied Sciences and Intelligent Systems E. Caianiello Pozzuoli Italy
- NEAPoLIS, Numerical and Experimental Advanced Program on Liquids and Interface Systems Joint Research Center CNR ‐ Università degli Studi di Napoli “Federico II” Napoli Italy
| | - Francesco Merola
- CNR‐ISASI Institute of Applied Sciences and Intelligent Systems E. Caianiello Pozzuoli Italy
- NEAPoLIS, Numerical and Experimental Advanced Program on Liquids and Interface Systems Joint Research Center CNR ‐ Università degli Studi di Napoli “Federico II” Napoli Italy
| | - Martina Mugnano
- CNR‐ISASI Institute of Applied Sciences and Intelligent Systems E. Caianiello Pozzuoli Italy
- NEAPoLIS, Numerical and Experimental Advanced Program on Liquids and Interface Systems Joint Research Center CNR ‐ Università degli Studi di Napoli “Federico II” Napoli Italy
| | - Mario Capasso
- CEINGE Biotecnologie Avanzate Naples Italy
- Dipartimento di Medicina Molecolare e Biotecnologie Mediche Università degli Studi di Napoli Federico II Naples Italy
| | - Achille Iolascon
- CEINGE Biotecnologie Avanzate Naples Italy
- Dipartimento di Medicina Molecolare e Biotecnologie Mediche Università degli Studi di Napoli Federico II Naples Italy
| | - Pier Luca Maffettone
- Dipartimento di Ingegneria Chimica dei Materiali e della Produzione Industriale Università degli Studi di Napoli “Federico II” Napoli Italy
- NEAPoLIS, Numerical and Experimental Advanced Program on Liquids and Interface Systems Joint Research Center CNR ‐ Università degli Studi di Napoli “Federico II” Napoli Italy
| | - Pietro Ferraro
- CNR‐ISASI Institute of Applied Sciences and Intelligent Systems E. Caianiello Pozzuoli Italy
- NEAPoLIS, Numerical and Experimental Advanced Program on Liquids and Interface Systems Joint Research Center CNR ‐ Università degli Studi di Napoli “Federico II” Napoli Italy
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6
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Kang W, Huang H, Cai M, Li Y, Hou W, Yun F, Wu X, Xue L, Wang S, Liu F. On-site cell concentration and viability detections using smartphone based field-portable cell counter. Anal Chim Acta 2019; 1077:216-224. [DOI: 10.1016/j.aca.2019.05.029] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2018] [Revised: 04/20/2019] [Accepted: 05/13/2019] [Indexed: 12/30/2022]
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7
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Sanjeev A, Kapellner Y, Shabairou N, Gur E, Sinvani M, Zalevsky Z. Non-Invasive Imaging Through Scattering Medium by Using a Reverse Response Wavefront Shaping Technique. Sci Rep 2019; 9:12275. [PMID: 31439914 PMCID: PMC6706411 DOI: 10.1038/s41598-019-48788-9] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2019] [Accepted: 08/01/2019] [Indexed: 11/24/2022] Open
Abstract
Fundamental challenge of imaging through a scattering media has been resolved by various approaches in the past two decades. Optical wavefront shaping technique is one such method in which one shapes the wavefront of light entering a scattering media using a wavefront shaper such that it cancels the scattering effect. It has been the most effective technique in focusing light inside a scattering media. Unfortunately, most of these techniques require direct access to the scattering medium or need to know the scattering properties of the medium beforehand. Through the novel scheme presented on this paper, both the illumination module and the detection are on the same side of the inspected object and the imaging process is a real time fast converging operation. We model the scattering medium being a biological tissue as a matrix having mathematical properties matched to the physical and biological aspects of the sample. In our adaptive optics scheme, we aim to estimate the scattering function and thus to encode the intensity of the illuminating laser light source using DMD (Digital Micromirror Device) with an inverse scattering function of the scattering medium, such that after passing its scattering function a focused beam is obtained. We optimize the pattern to be displayed on the DMD using Particle Swarm Algorithm (PSO) which eventually help in retrieving a 1D object hidden behind the media.
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Affiliation(s)
- Abhijit Sanjeev
- Faculty of Engineering and the Institute for Nanotechnology and Advanced Materials, Bar-Ilan University, Ramat-Gan, 5290002, Israel. .,EKB Technologies Ltd., Bat Yam, 5951301, Israel.
| | | | - Nadav Shabairou
- Faculty of Engineering and the Institute for Nanotechnology and Advanced Materials, Bar-Ilan University, Ramat-Gan, 5290002, Israel
| | - Eran Gur
- Azrieli College of Engineering, Jerusalem, 9103501, Israel
| | - Moshe Sinvani
- Faculty of Engineering and the Institute for Nanotechnology and Advanced Materials, Bar-Ilan University, Ramat-Gan, 5290002, Israel
| | - Zeev Zalevsky
- Faculty of Engineering and the Institute for Nanotechnology and Advanced Materials, Bar-Ilan University, Ramat-Gan, 5290002, Israel
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8
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Arandian A, Bagheri Z, Ehtesabi H, Najafi Nobar S, Aminoroaya N, Samimi A, Latifi H. Optical Imaging Approaches to Monitor Static and Dynamic Cell-on-Chip Platforms: A Tutorial Review. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2019; 15:e1900737. [PMID: 31087503 DOI: 10.1002/smll.201900737] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/09/2019] [Revised: 04/14/2019] [Indexed: 06/09/2023]
Abstract
Miniaturized laboratories on chip platforms play an important role in handling life sciences studies. The platforms may contain static or dynamic biological cells. Examples are a fixed medium of an organ-on-a-chip and individual cells moving in a microfluidic channel, respectively. Due to feasibility of control or investigation and ethical implications of live targets, both static and dynamic cell-on-chip platforms promise various applications in biology. To extract necessary information from the experiments, the demand for direct monitoring is rapidly increasing. Among different microscopy methods, optical imaging is a straightforward choice. Considering light interaction with biological agents, imaging signals may be generated as a result of scattering or emission effects from a sample. Thus, optical imaging techniques could be categorized into scattering-based and emission-based techniques. In this review, various optical imaging approaches used in monitoring static and dynamic platforms are introduced along with their optical systems, advantages, challenges, and applications. This review may help biologists to find a suitable imaging technique for different cell-on-chip studies and might also be useful for the people who are going to develop optical imaging systems in life sciences studies.
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Affiliation(s)
- Alireza Arandian
- Laser and Plasma Research Institute, Shahid Beheshti University, Tehran, 1983969411, Iran
| | - Zeinab Bagheri
- Faculty of Life Sciences and Biotechnology, Shahid Beheshti University, Tehran, 1983969411, Iran
| | - Hamide Ehtesabi
- Faculty of Life Sciences and Biotechnology, Shahid Beheshti University, Tehran, 1983969411, Iran
| | - Shima Najafi Nobar
- Faculty of Mechanical Engineering, K. N. Toosi University of Technology, Tehran, 1969764499, Iran
| | - Neda Aminoroaya
- Laser and Plasma Research Institute, Shahid Beheshti University, Tehran, 1983969411, Iran
| | - Ashkan Samimi
- Laser and Plasma Research Institute, Shahid Beheshti University, Tehran, 1983969411, Iran
| | - Hamid Latifi
- Laser and Plasma Research Institute, Shahid Beheshti University, Tehran, 1983969411, Iran
- Department of Physics, Shahid Beheshti University, Tehran, 1983969411, Iran
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9
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Han M, Li J, He G, Lin M, Xiao W, Li X, Wu X, Jiang X. Tailored 3D printed micro-crystallization chip for versatile and high-efficiency droplet evaporative crystallization. LAB ON A CHIP 2019; 19:767-777. [PMID: 30730524 DOI: 10.1039/c8lc01319e] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
Droplet evaporative crystallization on a micro-structured platform with limited interfacial area has potential applications in crystallization theory, bioengineering, and particle drug preparation. Here, an efficient and versatile approach is discussed for multiple drop-evaporative crystallization processes on a micro-crystallization chip fabricated via three-dimensional printing. A chip with limited interfacial area could be fabricated on a highly controlled crystallizer interface. During liquid injection, various drop locations and evaporative conditions can be used, which enables flexible and distinct crystallization processes. This reveals controlling mechanisms and identifies nucleation locations and growth paths. Various classic crystallization systems were introduced to evaluate the chip performance. Controlled nucleation and growth mechanisms at stable evaporative rates were revealed. From the final crystal morphologies, particle locations, and distributions, the effects of the initial concentration and droplet contact conditions at the triple-phase interface could be investigated with high adjustability. Moreover, the results can provide insights into the 'coffee ring' formation during evaporative crystallization, dendritic crystal growth, and hydrate crystallization mechanisms. In the limited microstructure, the capillary flow of a liquid drop can spontaneously drive the crystal distribution and morphology. Finally, incorrect liquid drop locations that led to unpredictable crystal formation and distributions were discussed to improve repeatability and efficiency. Applications include the manufacture of particle drugs and flow chemistry.
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Affiliation(s)
- Mingguang Han
- State Key Laboratory of Fine Chemicals, Engineering Laboratory for Petrochemical Energy-efficient Separation Technology of Liaoning Province, School of Chemical Engineering, Dalian University of Technology, Dalian, Liaoning 116024, China.
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10
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Montrésor S, Memmolo P, Bianco V, Ferraro P, Picart P. Comparative study of multi-look processing for phase map de-noising in digital Fresnel holographic interferometry. JOURNAL OF THE OPTICAL SOCIETY OF AMERICA. A, OPTICS, IMAGE SCIENCE, AND VISION 2019; 36:A59-A66. [PMID: 30874091 DOI: 10.1364/josaa.36.000a59] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/04/2018] [Accepted: 12/04/2018] [Indexed: 05/23/2023]
Abstract
This paper presents a comparative study of multi-look approaches for de-noising phase maps from digital holographic interferometry. A database of 160 simulated phase fringe patterns with eight different phase fringe patterns with fringe diversity was computed. For each fringe pattern, 20 realistic noise realizations are generated in order to simulate a multi-look process with 20 inputs. A set of 22 de-noising algorithms was selected and processed for each simulation. Three approaches for multi-look processing are evaluated. Quantitative appraisal is obtained using two metrics. The results show good agreement for algorithm rankings obtained with both metrics. One singular and highly practical result of the study is that a multi-look approach with average looks before noise processing performs better than averaging computed with all de-noised looks. The results also demonstrate that the two-dimensional windowed Fourier transform filtering exhibits the best performance in all cases and that the block-matching 3D (BM3D) algorithm is second in the ranking.
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11
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Bianco V, Memmolo P, Leo M, Montresor S, Distante C, Paturzo M, Picart P, Javidi B, Ferraro P. Strategies for reducing speckle noise in digital holography. LIGHT, SCIENCE & APPLICATIONS 2018; 7:48. [PMID: 30839600 PMCID: PMC6106996 DOI: 10.1038/s41377-018-0050-9] [Citation(s) in RCA: 86] [Impact Index Per Article: 14.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/23/2017] [Revised: 06/01/2018] [Accepted: 06/05/2018] [Indexed: 05/05/2023]
Abstract
Digital holography (DH) has emerged as one of the most effective coherent imaging technologies. The technological developments of digital sensors and optical elements have made DH the primary approach in several research fields, from quantitative phase imaging to optical metrology and 3D display technologies, to name a few. Like many other digital imaging techniques, DH must cope with the issue of speckle artifacts, due to the coherent nature of the required light sources. Despite the complexity of the recently proposed de-speckling methods, many have not yet attained the required level of effectiveness. That is, a universal denoising strategy for completely suppressing holographic noise has not yet been established. Thus the removal of speckle noise from holographic images represents a bottleneck for the entire optics and photonics scientific community. This review article provides a broad discussion about the noise issue in DH, with the aim of covering the best-performing noise reduction approaches that have been proposed so far. Quantitative comparisons among these approaches will be presented.
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Affiliation(s)
- Vittorio Bianco
- CNR-ISASI Istituto di Scienze Applicate e Sistemi Intelligenti “E. Caianiello”, via Campi Flegrei 34, 80078 Pozzuoli (NA), Italy
| | - Pasquale Memmolo
- CNR-ISASI Istituto di Scienze Applicate e Sistemi Intelligenti “E. Caianiello”, via Campi Flegrei 34, 80078 Pozzuoli (NA), Italy
| | - Marco Leo
- CNR-ISASI Istituto di Scienze Applicate e Sistemi Intelligenti “E. Caianiello”, via Campi Flegrei 34, 80078 Pozzuoli (NA), Italy
| | - Silvio Montresor
- Université du Maine, CNRS UMR 6613, LAUM, Avenue Olivier Messiaen, 72085 Le Mans Cedex 9, France
| | - Cosimo Distante
- CNR-ISASI Istituto di Scienze Applicate e Sistemi Intelligenti “E. Caianiello”, via Campi Flegrei 34, 80078 Pozzuoli (NA), Italy
| | - Melania Paturzo
- CNR-ISASI Istituto di Scienze Applicate e Sistemi Intelligenti “E. Caianiello”, via Campi Flegrei 34, 80078 Pozzuoli (NA), Italy
| | - Pascal Picart
- Université du Maine, CNRS UMR 6613, LAUM, Avenue Olivier Messiaen, 72085 Le Mans Cedex 9, France
| | - Bahram Javidi
- Electrical and Computer Engineering Department, University of Connecticut, U-4157, Storrs, CT 06269 USA
| | - Pietro Ferraro
- CNR-ISASI Istituto di Scienze Applicate e Sistemi Intelligenti “E. Caianiello”, via Campi Flegrei 34, 80078 Pozzuoli (NA), Italy
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12
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Quantifying Embolism: Label‐Free Volumetric Mapping of Thrombus Structure and Kinesis in a Microfluidic System with Optical Holography. ACTA ACUST UNITED AC 2018. [DOI: 10.1002/adbi.201800089] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
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13
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Somkuwar AS, Das B, Vinu RV, Park Y, Singh RK. Holographic imaging through a scattering layer using speckle interferometry. JOURNAL OF THE OPTICAL SOCIETY OF AMERICA. A, OPTICS, IMAGE SCIENCE, AND VISION 2017; 34:1392-1399. [PMID: 29036106 DOI: 10.1364/josaa.34.001392] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/03/2017] [Accepted: 06/30/2017] [Indexed: 06/07/2023]
Abstract
Optical imaging through complex scattering media is one of the major technical challenges with important applications in many research fields, ranging from biomedical imaging to astronomical telescopy to spatially multiplexed optical communications. Various approaches for imaging through a turbid layer have been recently proposed that exploit the advantage of object information encoded in correlations of the random optical fields. Here we propose and experimentally demonstrate an alternative approach for single-shot imaging of objects hidden behind an opaque scattering layer. The proposed technique relies on retrieving the interference fringes projected behind the scattering medium, which leads to complex field reconstruction, from far-field laser speckle interferometry with two-point intensity correlation measurement. We demonstrate that under suitable conditions, it is possible to perform imaging to reconstruct the complex amplitude of objects situated at different depths.
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14
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Park G, Han D, Kim G, Shin S, Kim K, Park JK, Park Y. Visualization and label-free quantification of microfluidic mixing using quantitative phase imaging. APPLIED OPTICS 2017; 56:6341-6347. [PMID: 29047833 DOI: 10.1364/ao.56.006341] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/15/2023]
Abstract
Microfluidic mixing plays a key role in various fields, including biomedicine and chemical engineering. To date, although various approaches for imaging microfluidic mixing have been proposed, they provide only quantitative imaging capability and require exogenous labeling agents. Quantitative phase imaging techniques, however, circumvent these problems and offer label-free quantitative information about concentration maps of microfluidic mixing. We present the quantitative phase imaging of microfluidic mixing in various types of polydimethylsiloxane microfluidic channels with different geometries; the feasibility of the present method was validated by comparing it with the results obtained by theoretical calculation based on Fick's law.
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15
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Microfluidic system for monitoring temporal variations of hemorheological properties and platelet adhesion in LPS-injected rats. Sci Rep 2017; 7:1801. [PMID: 28496179 PMCID: PMC5431819 DOI: 10.1038/s41598-017-01985-w] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2016] [Accepted: 04/05/2017] [Indexed: 12/21/2022] Open
Abstract
Sepsis causes multiple organs failures and eventually death. Changes in blood constituents due to sepsis lead to alterations in hemorheological properties, and cell adhesiveness. In this study, a new microfluidic system is proposed to measure temporal variations in biophysical properties of blood after injecting lipopolysaccharide (LPS) into a rat extracorporeal model under ex vivo condition. To measure blood viscosity, the interfacial line between blood and a reference fluid is formed in a Y-shaped channel. Based on the relation between interfacial width and pressure ratio, the temporal variation in blood viscosity is estimated. Optical images of blood flows are analyzed by decreasing flow rate for examination of red blood cell (RBC) aggregation. Platelets initiated by shear acceleration around the stenosis adhere to the post-stenosed region. By applying a correlation map that visualizes the decorrelation of the streaming blood flow, the area of adhered platelets can be quantitatively attained without labeling of platelets. To assess sepsis inflammation, conventional biomarkers (PCT and IL-8) are also monitored. The increasing tendency for blood viscosity, RBC aggregation, platelet adhesion, and septic biomarkers are observed after LPS injection. This microfluidic system would be beneficial for monitoring the changes in hemorheological properties and platelet activation caused by sepsis.
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16
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Meng X, Tian X, Kong Y, Sun A, Yu W, Qian W, Song X, Cui H, Xue L, Liu C, Wang S. Rapid in-focus corrections on quantitative amplitude and phase imaging using transport of intensity equation method. J Microsc 2017; 266:253-262. [PMID: 28248423 DOI: 10.1111/jmi.12535] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2016] [Revised: 01/24/2017] [Accepted: 01/25/2017] [Indexed: 01/04/2023]
Abstract
Transport of intensity equation (TIE) method can acquire sample phase distributions with high speed and accuracy, offering another perspective for cellular observations and measurements. However, caused by incorrect focal plane determination, blurs and halos are induced, decreasing resolution and accuracy in both retrieved amplitude and phase information. In order to obtain high-accurate sample details, we propose TIE based in-focus correction technique for quantitative amplitude and phase imaging, which can locate focal plane and then retrieve both in-focus intensity and phase distributions combining with numerical wavefront extraction and propagation as well as physical image recorder translation. Certified by both numerical simulations and practical measurements, it is believed the proposed method not only captures high-accurate in-focus sample information, but also provides a potential way for fast autofocusing in microscopic system.
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Affiliation(s)
- X Meng
- Department of Optoelectronic Information Science and Engineering, School of Science, Jiangnan University, Wuxi, Jiangsu, China
| | - X Tian
- Department of Optoelectronic Information Science and Engineering, School of Science, Jiangnan University, Wuxi, Jiangsu, China.,Present Address: Advanced Photonics Research Center, Laser Institute of Shandong Academy of Sciences, Qingdao, Shandong, China
| | - Y Kong
- Department of Optoelectronic Information Science and Engineering, School of Science, Jiangnan University, Wuxi, Jiangsu, China
| | - A Sun
- Department of Optoelectronic Information Science and Engineering, School of Science, Jiangnan University, Wuxi, Jiangsu, China
| | - W Yu
- Department of Optoelectronic Information Science and Engineering, School of Science, Jiangnan University, Wuxi, Jiangsu, China
| | - W Qian
- Department of Optoelectronic Information Science and Engineering, School of Science, Jiangnan University, Wuxi, Jiangsu, China
| | - X Song
- College of Electronics and Information Engineering, Shanghai University of Electric Power, Shanghai, China
| | - H Cui
- College of Electronics and Information Engineering, Shanghai University of Electric Power, Shanghai, China
| | - L Xue
- College of Electronics and Information Engineering, Shanghai University of Electric Power, Shanghai, China
| | - C Liu
- Department of Optoelectronic Information Science and Engineering, School of Science, Jiangnan University, Wuxi, Jiangsu, China
| | - S Wang
- Department of Optoelectronic Information Science and Engineering, School of Science, Jiangnan University, Wuxi, Jiangsu, China
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17
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Memmolo P, Merola F, Miccio L, Mugnano M, Ferraro P. Investigation on dynamics of red blood cells through their behavior as biophotonic lenses. JOURNAL OF BIOMEDICAL OPTICS 2016; 21:121509. [PMID: 27735017 DOI: 10.1117/1.jbo.21.12.121509] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/13/2016] [Accepted: 09/19/2016] [Indexed: 05/24/2023]
Abstract
The possibility to adopt biological matter as photonic optical elements can open scenarios in biophotonics research. Recently, it has been demonstrated that a red blood cell (RBC) can be seen as an optofluidic microlens by showing its imaging capability as well as its focal tunability. Moreover, correlation between an RBC’s morphology and its behavior as a refractive optical element has been established and its exploitation for biomedical diagnostic purposes has been foreseen. In fact, any deviation from the healthy RBC morphology can be seen as additional aberration in the optical wavefront passing through the cell. By this concept, accurate localization of focal spots of RBCs can become very useful in the blood disorders identification. We investigate the three-dimensional positioning of such focal spots over time for samples with two different osmolarity conditions, i.e., when they assume discocyte and spherical shapes, respectively. We also demonstrate that a temporal variation of an RBC’s focal points along the optical axis is correlated to the temporal fluctuations in the RBC’s thickness maps. Furthermore, we show a sort of synchronization of the whole erythrocytes ensemble.
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Affiliation(s)
- Pasquale Memmolo
- National Council of Research-Istituto di Scienze Applicate e Sistemi Intelligenti "E. Caianiello," Via Campi Flegrei 34, 80078 Pozzuoli, Naples, Italy
| | - Francesco Merola
- National Council of Research-Istituto di Scienze Applicate e Sistemi Intelligenti "E. Caianiello," Via Campi Flegrei 34, 80078 Pozzuoli, Naples, Italy
| | - Lisa Miccio
- National Council of Research-Istituto di Scienze Applicate e Sistemi Intelligenti "E. Caianiello," Via Campi Flegrei 34, 80078 Pozzuoli, Naples, Italy
| | - Martina Mugnano
- National Council of Research-Istituto di Scienze Applicate e Sistemi Intelligenti "E. Caianiello," Via Campi Flegrei 34, 80078 Pozzuoli, Naples, Italy
| | - Pietro Ferraro
- National Council of Research-Istituto di Scienze Applicate e Sistemi Intelligenti "E. Caianiello," Via Campi Flegrei 34, 80078 Pozzuoli, Naples, Italy
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18
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Sahlev MA, Rivenson Y, Meiri A, Zalevsky Z. Phase retrieval deblurring for imaging of dense object within a low scattering soft biological tissue. JOURNAL OF BIOMEDICAL OPTICS 2016; 21:96008. [PMID: 27637006 DOI: 10.1117/1.jbo.21.9.096008] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/31/2016] [Accepted: 08/29/2016] [Indexed: 06/06/2023]
Abstract
Tissues are characterized by a strong scattering of visible optical radiation, which prevents one from achieving deep-tissue imaging. We propose a computational imaging technique for the inference of specific macroscopic, spatial phase distribution features of the scattering media. The spatial phase distribution is reconstructed from several defocused intensity images. We empirically demonstrate the method by reconstructing the location of two fibula chicken bones, embedded within chicken breast tissue. The suggested technique is safe, using visible laser illumination, and noninvasive. It is also cost-effective since a simple optical system is used and the images are acquired using a conventional camera, and it does not require interferometric detection as well as direct access to the object in absence of the layer.
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Affiliation(s)
- Maya Aviv Sahlev
- Bar Ilan University, Faculty of Engineering, Ramat Gan 5290002, Israel
| | - Yair Rivenson
- Bar Ilan University, Faculty of Engineering, Ramat Gan 5290002, Israel
| | - Amihai Meiri
- Bar Ilan University, Faculty of Engineering, Ramat Gan 5290002, Israel
| | - Zeev Zalevsky
- Bar Ilan University, Faculty of Engineering, Ramat Gan 5290002, Israel
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19
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Bianco V, Memmolo P, Paturzo M, Finizio A, Javidi B, Ferraro P. Quasi noise-free digital holography. LIGHT, SCIENCE & APPLICATIONS 2016; 5:e16142. [PMID: 30167185 PMCID: PMC6059929 DOI: 10.1038/lsa.2016.142] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/11/2015] [Revised: 03/21/2016] [Accepted: 03/27/2016] [Indexed: 05/05/2023]
Abstract
One of the main drawbacks of Digital Holography (DH) is the coherent nature of the light source, which severely corrupts the quality of holographic reconstructions. Although numerous techniques to reduce noise in DH have provided good results, holographic noise suppression remains a challenging task. We propose a novel framework that combines the concepts of encoding multiple uncorrelated digital holograms, block grouping and collaborative filtering to achieve quasi noise-free DH reconstructions. The optimized joint action of these different image-denoising methods permits the removal of up to 98% of the noise while preserving the image contrast. The resulting quality of the hologram reconstructions is comparable to the quality achievable with non-coherent techniques and far beyond the current state of art in DH. Experimental validation is provided for both single-wavelength and multi-wavelength DH, and a comparison with the most used holographic denoising methods is performed.
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Affiliation(s)
- Vittorio Bianco
- Institute of Applied Sciences and Intelligent Systems ”E. Caianiello”, Italian National Research Council (ISASI-CNR), Via Campi Flegrei 34, 80078, Pozzuoli (Napoli), Italy
| | - Pasquale Memmolo
- Institute of Applied Sciences and Intelligent Systems ”E. Caianiello”, Italian National Research Council (ISASI-CNR), Via Campi Flegrei 34, 80078, Pozzuoli (Napoli), Italy
- E-mail:
| | - Melania Paturzo
- Institute of Applied Sciences and Intelligent Systems ”E. Caianiello”, Italian National Research Council (ISASI-CNR), Via Campi Flegrei 34, 80078, Pozzuoli (Napoli), Italy
| | - Andrea Finizio
- Institute of Applied Sciences and Intelligent Systems ”E. Caianiello”, Italian National Research Council (ISASI-CNR), Via Campi Flegrei 34, 80078, Pozzuoli (Napoli), Italy
| | - Bahram Javidi
- ECE Department, University of Connecticut, U-157, Storrs, Connecticut, 06269, USA
| | - Pietro Ferraro
- Institute of Applied Sciences and Intelligent Systems ”E. Caianiello”, Italian National Research Council (ISASI-CNR), Via Campi Flegrei 34, 80078, Pozzuoli (Napoli), Italy
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20
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Patabadige DEW, Jia S, Sibbitts J, Sadeghi J, Sellens K, Culbertson CT. Micro Total Analysis Systems: Fundamental Advances and Applications. Anal Chem 2015; 88:320-38. [DOI: 10.1021/acs.analchem.5b04310] [Citation(s) in RCA: 80] [Impact Index Per Article: 8.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
- Damith E. W. Patabadige
- Department
of Chemistry, Kansas State University, 213 CBC Building, Manhattan, Kansas 66506, United States
| | - Shu Jia
- Department
of Chemistry, Kansas State University, 213 CBC Building, Manhattan, Kansas 66506, United States
| | - Jay Sibbitts
- Department
of Chemistry, Kansas State University, 213 CBC Building, Manhattan, Kansas 66506, United States
| | - Jalal Sadeghi
- Department
of Chemistry, Kansas State University, 213 CBC Building, Manhattan, Kansas 66506, United States
- Laser & Plasma Research Institute, Shahid Beheshti University, Evin, Tehran, 1983963113, Iran
| | - Kathleen Sellens
- Department
of Chemistry, Kansas State University, 213 CBC Building, Manhattan, Kansas 66506, United States
| | - Christopher T. Culbertson
- Department
of Chemistry, Kansas State University, 213 CBC Building, Manhattan, Kansas 66506, United States
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21
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Bianco V, Paturzo M, Marchesano V, Gallotta I, Di Schiavi E, Ferraro P. Optofluidic holographic microscopy with custom field of view (FoV) using a linear array detector. LAB ON A CHIP 2015; 15:2117-24. [PMID: 25832808 DOI: 10.1039/c5lc00143a] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/21/2023]
Abstract
Simple and effective imaging strategies are of utmost interest for applications on a lab-on-chip scale. In fact, the majority of diagnostic tools for medical as well as biotechnological studies still employ image-based approaches. Having onboard the chip a compact but powerful imaging apparatus with multiple imaging capabilities, such as 3D dynamic focusing along the optical axis, unlimited field of view (FoV) and double outputs, namely, intensity and quantitative phase-contrast maps of biological objects, is of extreme importance for the next generation of Lab-on-a-Chip (LoC) devices. Here we present a coherent 3D microscopy approach with a holographic modality that is specifically suitable for studying biological samples while they simply flow along microfluidic paths. The LoC device is equipped with a compact linear array detector to capture and generate a new conceptual type of a digital hologram in the space-time domain, named here as Space-Time Digital Hologram (STDH). The reported results show that the method is a promising diagnostic tool for optofluidic investigations of biological specimens.
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Affiliation(s)
- V Bianco
- CNR-Istituto di Cibernetica "E. Caianiello", Via Campi Flegrei 34, I-80078, Pozzuoli (NA), Italy.
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Mandracchia B, Pagliarulo V, Paturzo M, Ferraro P. Surface Plasmon Resonance Imaging by Holographic Enhanced Mapping. Anal Chem 2015; 87:4124-8. [DOI: 10.1021/acs.analchem.5b00095] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- B. Mandracchia
- CNR−Istituto di Cibernetica “E. Caianiello”, Via Campi Flegrei 34, 80078, Pozzuoli, Napoli, Italy
- Dipartimento
di Ingegneria Chimica, dei Materiali e della Produzione Industriale, Università di Napoli Federico II, Piazzale Tecchio 80, 80100, Napoli, Italy
| | - V. Pagliarulo
- CNR−Istituto di Cibernetica “E. Caianiello”, Via Campi Flegrei 34, 80078, Pozzuoli, Napoli, Italy
| | - M. Paturzo
- CNR−Istituto di Cibernetica “E. Caianiello”, Via Campi Flegrei 34, 80078, Pozzuoli, Napoli, Italy
| | - P. Ferraro
- CNR−Istituto di Cibernetica “E. Caianiello”, Via Campi Flegrei 34, 80078, Pozzuoli, Napoli, Italy
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Bianco V, Marchesano V, Finizio A, Paturzo M, Ferraro P. Self-propelling bacteria mimic coherent light decorrelation. OPTICS EXPRESS 2015; 23:9388-9396. [PMID: 25968769 DOI: 10.1364/oe.23.009388] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
We show here that live e-coli bacterial culture, thanks to the self-propelling feature, can significantly reduce the coherent noise. In fact, the typical self-propelled drive of such microorganisms provides enough time diversity in speckle patterns. Optical properties of a bacteria suspension have been investigated and analyzed thus showing that it behaves as a quite good optical speckle decorrelation device. Samples with different bacteria densities have been studied. The decorrelation effect has been demonstrated by probing the imaging performance in through transmission in coherent microscope configuration.
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24
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Red blood cell as an adaptive optofluidic microlens. Nat Commun 2015; 6:6502. [PMID: 25758026 DOI: 10.1038/ncomms7502] [Citation(s) in RCA: 123] [Impact Index Per Article: 13.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2014] [Accepted: 02/04/2015] [Indexed: 11/09/2022] Open
Abstract
The perspective of using live cells as lenses could open new revolutionary and intriguing scenarios in the future of biophotonics and biomedical sciences for endoscopic vision, local laser treatments via optical fibres and diagnostics. Here we show that a suspended red blood cell (RBC) behaves as an adaptive liquid-lens at microscale, thus demonstrating its imaging capability and tunable focal length. In fact, thanks to the intrinsic elastic properties, the RBC can swell up from disk volume of 90 fl up to a sphere reaching 150 fl, varying focal length from negative to positive values. These live optofluidic lenses can be fully controlled by triggering the liquid buffer's chemistry. Real-time accurate measurement of tunable focus capability of RBCs is reported through dynamic wavefront characterization, showing agreement with numerical modelling. Moreover, in analogy to adaptive optics testing, blood diagnosis is demonstrated by screening abnormal cells through focal-spot analysis applied to an RBC ensemble as a microlens array.
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25
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Yeom E, Lee SJ. Microfluidic-based speckle analysis for sensitive measurement of erythrocyte aggregation: A comparison of four methods for detection of elevated erythrocyte aggregation in diabetic rat blood. BIOMICROFLUIDICS 2015; 9:024110. [PMID: 25945136 PMCID: PMC4385097 DOI: 10.1063/1.4917023] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/24/2015] [Accepted: 03/26/2015] [Indexed: 05/15/2023]
Abstract
Biochemical alterations in the plasma and red blood cell (RBC) membrane of diabetic blood lead to excessive erythrocyte aggregation (EA). EA would significantly impede the blood flow and increase the vascular flow resistance contributing to peripheral vascular diseases. In this study, a simple microfluidic-based method is proposed to achieve sensitive detection of hyperaggregation. When a blood sample is delivered into the device, images of blood flows are obtained with a short exposure time for a relatively long measuring time. A micro-particle image velocimetry technique was employed to monitor variation of the flow rate of blood as a function of time. Given that EA formation in the channel creates clear speckle patterns, the EA extent can be estimated by calculating a speckle area (ASpeckle) through a normalized autocovariance function. The hematocrit effect is assessed by comparing optical images transmitted through blood samples. EA variations caused by dextran treatment are quantitatively evaluated using characteristic time (λSpeckle) obtained by fitting the variations of ASpeckle. Other indices including number of RBCs in an aggregate (NRBC), characteristic time of erythrocyte sedimentation rate (λESR), and aggregation index estimated from ultrasound signals (AIEcho) are determined under different EA conditions using conventional techniques. The four different methods are applied to diabetic blood samples to compare their indices under hyperaggregation conditions. It is found that the proposed method can detect variation of EA reasonably, compared with conventional measurement techniques. These experimental demonstrations support the notion that the proposed method is capable of effectively monitoring the biophysical properties of diabetic blood.
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Affiliation(s)
- Eunseop Yeom
- Department of Mechanical Engineering, Pohang University of Science and Technology (POSTECH) , Pohang, South Korea
| | - Sang Joon Lee
- Department of Mechanical Engineering, Pohang University of Science and Technology (POSTECH) , Pohang, South Korea
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26
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Bianco V, Paturzo M, Ferraro P. Spatio-temporal scanning modality for synthesizing interferograms and digital holograms. OPTICS EXPRESS 2014; 22:22328-39. [PMID: 25321705 DOI: 10.1364/oe.22.022328] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/12/2023]
Abstract
We investigate the spatio-temporal scanning of a single-pixel row for building up synthetic interferograms or digital holograms, shifted each other of a desired phase step. This unusual recording modality exploits the object movement to synthesize interferograms with extended Field of View and improved noise contrast. We report the theoretical formulation of the synthetizing recording process and experimental evidence of various cases demonstrating quantitative phase retrieval by adopting this intrinsic phase-shifting procedure. The proposed method could be particularly suited in all cases where the object shift is an intrinsic feature of the investigated system, as e.g. in microfluidics imaging.
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