1
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Acar M, Daştan A, Koçak R. Fluorometric and colorimetric sensor for selective detection of cyanide anion by dibenzosuberenone-based dihydropyridazine in aqueous solution. Talanta 2024; 277:126241. [PMID: 38820826 DOI: 10.1016/j.talanta.2024.126241] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2024] [Revised: 05/08/2024] [Accepted: 05/09/2024] [Indexed: 06/02/2024]
Abstract
A new chemosensory based on deprotonation and intramolecular charge transfer (ICT) was developed to detect cyanide in food samples. Deprotonation was facilitated by increasing the acidity of the NH proton in the dibenzosuberenone-based dihydropyridazine chemosensor Pz3 with -CN substituents. Addition of cyanide to acetonitrile and aqueous acetonitrile solution (1/9) of Pz3 resulted in their significant color change from colorless to purple in visible light, accompanied by a strong red shift in the absorption spectrum. Meanwhile, the near-infrared (NIR) emission (ex. 525 nm, em. 670 nm) of Pz3- resulting from deprotonation showed fluorescence switching behavior to detect the cyanide anion. While the acidic NH protons interact with basic anions as F-, CN-, OAc- and H2PO4- in organic solution (MeCN), just CN ions interact with in aqueous organic solutions (H2O-MeCN 1/9 HEPES pH 7.4). The limit of detection of cyanide from the fluorescence spectrum is 80 nM, which is well below the value determined for drinking water by World Health Organization (WHO). The interference effect of cations and anions showed that Pz3 could play an important role in the determination of waste NaCN. In addition, Pz3 successfully carried out the selective detection of cyanide in food samples such as bitter almonds and sprouting potatoes.
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Affiliation(s)
- Murat Acar
- Department of Chemistry, Faculty of Sciences, Atatürk University, Erzurum 25240, Turkey; Research Laboratory Practice and Research Centre (ALUM), Iğdır University, Iğdır 76000, Turkey.
| | - Arif Daştan
- Department of Chemistry, Faculty of Sciences, Atatürk University, Erzurum 25240, Turkey
| | - Ramazan Koçak
- Department of Chemistry, Faculty of Sciences, Atatürk University, Erzurum 25240, Turkey; Department of Chemistry, Faculty of Arts and Sciences, Amasya University, Amasya 05100, Turkey.
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2
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Ishizuka T, Grover N, Kingsbury CJ, Kotani H, Senge MO, Kojima T. Nonplanar porphyrins: synthesis, properties, and unique functionalities. Chem Soc Rev 2022; 51:7560-7630. [PMID: 35959748 DOI: 10.1039/d2cs00391k] [Citation(s) in RCA: 18] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Porphyrins are variously substituted tetrapyrrolic macrocycles, with wide-ranging biological and chemical applications derived from metal chelation in the core and the 18π aromatic surface. Under suitable conditions, the porphyrin framework can deform significantly from regular planar shape, owing to steric overload on the porphyrin periphery or steric repulsion in the core, among other structure modulation strategies. Adopting this nonplanar porphyrin architecture allows guest molecules to interact directly with an exposed core, with guest-responsive and photoactive electronic states of the porphyrin allowing energy, information, atom and electron transfer within and between these species. This functionality can be incorporated and tuned by decoration of functional groups and electronic modifications, with individual deformation profiles adapted to specific key sensing and catalysis applications. Nonplanar porphyrins are assisting breakthroughs in molecular recognition, organo- and photoredox catalysis; simultaneously bio-inspired and distinctly synthetic, these molecules offer a new dimension in shape-responsive host-guest chemistry. In this review, we have summarized the synthetic methods and design aspects of nonplanar porphyrin formation, key properties, structure and functionality of the nonplanar aromatic framework, and the scope and utility of this emerging class towards outstanding scientific, industrial and environmental issues.
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Affiliation(s)
- Tomoya Ishizuka
- Department of Chemistry, Faculty of Pure and Applied Sciences, University of Tsukuba and CREST (JST), 1-1-1 Tennoudai, Tsukuba, Ibaraki 305-8571, Japan.
| | - Nitika Grover
- School of Chemistry, Chair of Organic Chemistry, Trinity Biomedical Sciences Institute, Trinity College Dublin, The University of Dublin, 152-160 Pearse Street, Dublin 2, Ireland
| | - Christopher J Kingsbury
- School of Chemistry, Chair of Organic Chemistry, Trinity Biomedical Sciences Institute, Trinity College Dublin, The University of Dublin, 152-160 Pearse Street, Dublin 2, Ireland
| | - Hiroaki Kotani
- Department of Chemistry, Faculty of Pure and Applied Sciences, University of Tsukuba and CREST (JST), 1-1-1 Tennoudai, Tsukuba, Ibaraki 305-8571, Japan.
| | - Mathias O Senge
- Institute for Advanced Study (TUM-IAS), Technical University of Munich, Focus Group - Molecular and Interfacial Engineering of Organic Nanosystems, Lichtenbergstrasse 2a, 85748 Garching, Germany.
| | - Takahiko Kojima
- Department of Chemistry, Faculty of Pure and Applied Sciences, University of Tsukuba and CREST (JST), 1-1-1 Tennoudai, Tsukuba, Ibaraki 305-8571, Japan.
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3
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Kumar S, Chaudhri N, Osterloh WR, Kadish KM, Sankar M. Nickel(II) monobenzoporphyrins and chlorins: synthesis, electrochemistry and anion sensing properties. Dalton Trans 2021; 50:17086-17100. [PMID: 34779452 DOI: 10.1039/d1dt03122h] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A series of nickel(II) monobenzochlorins (MBCs) and monobenzoporphyrins (MBPs) containing β-appended or meso,β-fused indanedione (IND) or malononitrile (MN) groups were synthesized and characterized for their physicochemical, electrochemical and anion sensing properties. Each investigated compound contained four meso-phenyl rings and a single β,β'-fused 4,5-di(methoxycarbonyl)benzene ring, with the chlorins represented as NiMBC(Y)2(R)4 and the porphyrins as NiMBP(YF)2, where Y is an indanedione (IND) or malononitrile (MN) group, R = H or Br and YF is a meso,β-fused IND or MN substituent. One of the investigated compounds, NiMBP(IND)2, was structurally characterized and shown to possess a ruffled macrocyclic conformation. The monobenzochlorins, NiMBC(IND)2, NiMBC(IND)2Br4 and NiMBC(MN)2, reversibly respond to basic anions such as CN-, F-, OAc- and H2PO4- through a visible color change assigned to the deprotonation of the vicinal proton on the appended IND or MN substituents. The malononitrile-fused NiII monobenzoporphyrin, NiMBP(MN)2, exhibited a selective but irreversible visual detection of cyanide ions (LOD = 2.23 ppm). This reaction afforded a tri-fused π-extended monobenzoporphyrin product represented as NiMBP(VCN)2 (where VCN = meso,β-fused vinyl cyanide) in non-aqueous media and proceeded via anion induced electron transfer (AIET). The in situ generated π-extended porphyrin was also isolated and characterized as to its physicochemical and electrochemical properties and found to possess a narrow electrochemical HOMO-LUMO gap of 1.46 V along with a near-IR (NIR) absorption band located at 861 nm.
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Affiliation(s)
- Sandeep Kumar
- Department of Chemistry, Indian Institute of Technology Roorkee, Roorkee 247667, India.
| | - Nivedita Chaudhri
- Department of Chemistry, Indian Institute of Technology Roorkee, Roorkee 247667, India.
| | - W Ryan Osterloh
- Department of Chemistry, University of Houston, Houston, TX, 77204-5003, USA.
| | - Karl M Kadish
- Department of Chemistry, University of Houston, Houston, TX, 77204-5003, USA.
| | - Muniappan Sankar
- Department of Chemistry, Indian Institute of Technology Roorkee, Roorkee 247667, India.
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4
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Osadchuk I, Aav R, Borovkov V, Clot E. Chirogenesis in Zinc Porphyrins: Theoretical Evaluation of Electronic Transitions, Controlling Structural Factors and Axial Ligation. Chemphyschem 2021; 22:1817-1833. [PMID: 34213815 PMCID: PMC8457158 DOI: 10.1002/cphc.202100345] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/04/2021] [Revised: 06/24/2021] [Indexed: 12/15/2022]
Abstract
In the present work, sixteen different zinc porphyrins (possessing different meso substituents) with and without a chiral guest were modelled using DFT and TD-DFT approaches in order to understand the influence of various controlling factors on electronic circular dichroism (ECD) spectra. Two major aspects are influenced by these factors: excitation energy of the electronic transitions and their intensity. In the case of excitation energy, the influence increases in the following order: orientation of the peripheral substituents
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Affiliation(s)
- Irina Osadchuk
- Department of Chemistry and BiotechnologySchool of ScienceTallinn University of Technology AddressAkadeemia tee 1512618TallinnEstonia
- ICGMUniv MontpellierCNRS, ENSCMMontpellierFrance
| | - Riina Aav
- Department of Chemistry and BiotechnologySchool of ScienceTallinn University of Technology AddressAkadeemia tee 1512618TallinnEstonia
| | - Victor Borovkov
- Department of Chemistry and BiotechnologySchool of ScienceTallinn University of Technology AddressAkadeemia tee 1512618TallinnEstonia
| | - Eric Clot
- ICGMUniv MontpellierCNRS, ENSCMMontpellierFrance
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5
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Norvaiša K, Yeow K, Twamley B, Roucan M, Senge MO. Strategic Synthesis of 'Picket Fence' Porphyrins Based on Nonplanar Macrocycles. European J Org Chem 2021; 2021:1871-1882. [PMID: 33889056 PMCID: PMC8048935 DOI: 10.1002/ejoc.202100154] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2021] [Revised: 03/04/2021] [Indexed: 12/31/2022]
Abstract
Traditional 'picket fence' porphyrin systems have been a topic of interest for their capacity to direct steric shielding effects selectively to one side of the macrocycle. Sterically overcrowded porphyrin systems that adopt macrocycle deformations have recently drawn attention for their applications in organocatalysis and sensing. Here we explore the combined benefits of nonplanar porphyrins and the old molecular design to bring new concepts to the playing field. The challenging ortho-positions of meso-phenyl residues in dodecasubstituted porphyrin systems led us to transition to less hindered para- and meta-sites and develop selective demethylation based on the steric interplay. Isolation of the symmetrical target compound [2,3,7,8,12,13,17,18-octaethyl-5,10,15,20-tetrakis(3,5-dipivaloyloxyphenyl)porphyrin] was investigated under two synthetic pathways. The obtained insight was used to isolate unsymmetrical [2,3,7,8,12,13,17,18-octaethyl-5,10,15,20-tetrakis(2-nitro-5-pivaloyloxyphenyl)porphyrin]. Upon separation of the atropisomers, a detailed single-crystal X-ray crystallographic analysis highlighted intrinsic intermolecular interactions. The nonplanarity of these systems in combination with 'picket fence' motifs provides an important feature in the design of supramolecular ensembles.
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Affiliation(s)
- Karolis Norvaiša
- Chair of Organic ChemistrySchool of ChemistryTrinity Biomedical Sciences InstituteTrinity College DublinThe University of Dublin152–160 Pearse StreetDublin2Ireland
| | - Kathryn Yeow
- Chair of Organic ChemistrySchool of ChemistryTrinity Biomedical Sciences InstituteTrinity College DublinThe University of Dublin152–160 Pearse StreetDublin2Ireland
| | - Brendan Twamley
- School of ChemistryTrinity College DublinThe University of DublinDublin2Ireland
| | - Marie Roucan
- Chair of Organic ChemistrySchool of ChemistryTrinity Biomedical Sciences InstituteTrinity College DublinThe University of Dublin152–160 Pearse StreetDublin2Ireland
| | - Mathias O. Senge
- Chair of Organic ChemistrySchool of ChemistryTrinity Biomedical Sciences InstituteTrinity College DublinThe University of Dublin152–160 Pearse StreetDublin2Ireland
- Institute for Advanced Study (TUM-IAS)Technical University of MunichLichtenbergstrasse 2a85748GarchingGermany
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6
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Supramolecular Chirogenesis in Bis-Porphyrin: Crystallographic Structure and CD Spectra for a Complex with a Chiral Guanidine Derivative. Symmetry (Basel) 2021. [DOI: 10.3390/sym13020275] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022] Open
Abstract
The complexation of (3aR,7aR)-N-(3,5-bis(trifluoromethyl)phenyl)octahydro-2H-benzo[d]imidazol-2-imine (BTI), as a guest, to ethane-bridged bis(zinc octaethylporphyrin), bis(ZnOEP), as a host, has been studied by means of ultraviolet-visible (UV-Vis) and circular dichroism (CD) absorption spectroscopies, single crystal X-ray diffraction, and computational simulation. The formation of 1:2 host-guest complex was established by X-ray diffraction and UV-Vis titration studies. Two guest BTI molecules are located at the opposite sides of two porphyrin subunits of bis(ZnOEP) host, which is resting in the anti-conformation. The complexation of BTI molecules proceed via coordination of the imine nitrogens to the zinc ions of each porphyrin subunit of the host. Such supramolecular organization of the complex results in a screw arrangement of the two porphyrin subunits, inducing a strong CD signal in the Soret (B) band region. The corresponding DFT computational studies are in a good agreement with the experimental results and prove the presence of 1:2 host-guest complex as the major component in the solution (97.7%), but its optimized geometry differs from that observed in the solid-state. The UV-Vis and CD spectra simulated by using the solution-state geometry and the TD-DFT/ωB97X-D/cc-pVDZ + SMD (CH2Cl2) level of theory reproduced the experimentally obtained UV-Vis and CD spectra and confirmed the difference between the solid-state and solution structures. Moreover, it was shown that CD spectrum is very sensitive to the spatial arrangement of porphyrin subunits.
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7
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Norvaiša K, O'Brien JE, Gibbons DJ, Senge MO. Elucidating Atropisomerism in Nonplanar Porphyrins with Tunable Supramolecular Complexes. Chemistry 2020; 27:331-339. [PMID: 33405259 PMCID: PMC7839692 DOI: 10.1002/chem.202003414] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2020] [Indexed: 12/19/2022]
Abstract
Atropisomerism is a fundamental feature of substituted biaryls resulting from rotation around the biaryl axis. Different stereoisomers are formed due to restricted rotation about the single bond, a situation often found in substituted porphyrins. Previously NMR determination of porphyrin atropisomers proved difficult, if not almost impossible to accomplish, due to low resolution or unresolvable resonance signals that predominantly overlapped. Here, we shed some light on this fundamental issue found in porphyrinoid stereochemistry. Using benzenesulfonic acid (BSA) for host‐guest interactions and performing 1D, 2D NMR spectroscopic analyses, we were able to characterize all four rotamers of the nonplanar 5,10,15,20‐tetrakis(2‐aminophenyl)‐2,3,7,8,12,13,17,18‐octaethylporphyirin as restricted H‐bonding complexes. Additionally, X‐ray structural analysis was used to investigate aspects of the weak host–guest interactions. A detailed assignment of the chemical signals suggests charge‐assisted complexation as a key to unravel the atropisomeric enigma. From a method development perspective, symmetry operations unique to porphyrin atropisomers offer an essential handle to accurately identify the rotamers using NMR techniques only.
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Affiliation(s)
- Karolis Norvaiša
- School of Chemistry, Trinity Biomedical Sciences Institute, Trinity College Dublin, The University of Dublin, 152-160 Pearse Street, Dublin, 2, Ireland
| | - John E O'Brien
- School of Chemistry, Trinity Biomedical Sciences Institute, Trinity College Dublin, The University of Dublin, 152-160 Pearse Street, Dublin, 2, Ireland
| | - Dáire J Gibbons
- School of Chemistry, Trinity Biomedical Sciences Institute, Trinity College Dublin, The University of Dublin, 152-160 Pearse Street, Dublin, 2, Ireland
| | - Mathias O Senge
- School of Chemistry, Trinity Biomedical Sciences Institute, Trinity College Dublin, The University of Dublin, 152-160 Pearse Street, Dublin, 2, Ireland.,Institute for Advanced Study (TUM-IAS), Technical University of Munich, Lichtenbergstrasse 2 a, 85748, Garching, Germany
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8
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Grover N, Sankar M. N-Confused Porphyrin - A Unique "Turn-On" Chemosensor for CN - and F - ions and "Turn-Off" Sensor for ClO 4 - ions. Chem Asian J 2020; 15:2192-2197. [PMID: 32468689 DOI: 10.1002/asia.202000557] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/05/2020] [Revised: 05/27/2020] [Indexed: 12/21/2022]
Abstract
N-Confused meso-tetrakis(4-carbomethoxyphenyl)porphyrin (1) and its Ni(II) complex (1 a) have been synthesized and utilized for anion sensing studies, and the results are compared with N-confused meso-tetraphenylporphyrin (NCTPP). Anion susceptibilities of 1 and 1 a were investigated using spectroscopic, electrochemical, and DFT studies. Porphyrins 1 and 1 a were able to detect CN- , F- , and ClO4 - ions selectively over the tested set of anions even at ppm level. Interestingly, the addition of ClO4 - ions resulted in fluorescence quenching (turn off) whereas the addition of F- or CN- resulted in fluorescence enhancement (turn on). Notably, the TFA addition resulted in fluorescence quenching, whereas the fluorescence enhancement was observed while adding TBAOH. The higher association constant (Ka ) values with anions, lower detection limit, and shifts in redox potentials are due to the electron-withdrawing effect of the -COOCH3 group at the para-position of the meso-phenyl ring. This electron-withdrawing nature is crucial for the higher affinity towards anions. The anion sensing description in this article may not only unveil the built-in nature of N-confused porphyrins, but may also provide a general proposal for the development of novel anion sensors based on porphyrinoids. The electron-deficient porphyrin framework, large polarisable π-system, and anion binding through the outer NH or a combination of the above factors serve as a foundation for N-confused porphyrin to act as an anion sensor.
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Affiliation(s)
- Nitika Grover
- Department of Chemistry, Indian Institute of Technology Roorkee, Roorkee, 247667, Uttarakhand, India
| | - Muniappan Sankar
- Department of Chemistry, Indian Institute of Technology Roorkee, Roorkee, 247667, Uttarakhand, India
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9
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Dey N, Bhattacharya S. Switchable Optical Probes for Simultaneous Targeting of Multiple Anions. Chem Asian J 2020; 15:1759-1779. [DOI: 10.1002/asia.201901811] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/26/2019] [Revised: 02/08/2020] [Indexed: 11/07/2022]
Affiliation(s)
- Nilanjan Dey
- Department of Organic Chemistry Indian Institute of Science Bangalore 560012
- Present Address: Department of Chemistry Kyoto University Kyoto Prefecture 606-8501 Japan
| | - Santanu Bhattacharya
- Department of Organic Chemistry Indian Institute of Science Bangalore 560012
- Present Address Indian Association of Cultivation of Science Kolkata 700032 India
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10
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Osadchuk I, Borovkov V, Aav R, Clot E. Benchmarking computational methods and influence of guest conformation on chirogenesis in zinc porphyrin complexes. Phys Chem Chem Phys 2020; 22:11025-11037. [DOI: 10.1039/d0cp00965b] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Different computational methods and influence of the guest conformation and solvent effect to analyze chirogenesis in zinc porphyrins by several chiral compounds have been investigated.
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Affiliation(s)
- Irina Osadchuk
- Department of Chemistry and Biotechnology
- Tallinn University of Technology
- Tallinn 12618
- Estonia
- ICGM, University of Montpellier
| | - Victor Borovkov
- Department of Chemistry and Biotechnology
- Tallinn University of Technology
- Tallinn 12618
- Estonia
- College of Chemistry and Materials Science
| | - Riina Aav
- Department of Chemistry and Biotechnology
- Tallinn University of Technology
- Tallinn 12618
- Estonia
| | - Eric Clot
- ICGM, University of Montpellier
- CNRS
- ENSCM
- Montpellier
- France
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11
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Rathi P, Butcher R, Sankar M. Unsymmetrical nonplanar 'push-pull' β-octasubstituted porphyrins: facile synthesis, structural, photophysical and electrochemical redox properties. Dalton Trans 2019; 48:15002-15011. [PMID: 31556414 DOI: 10.1039/c9dt02792k] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
Mixed substitution at the β-position of porphyrins influences their photophysical and electrochemical redox properties. Two new series of asymmetrically mixed β-octasubstituted porphyrins viz. MTPP(Ph)2Br5X (X = NO2 or Br and M = 2H, Co(ii), Ni(ii), Cu(ii), and Zn(ii)) have been synthesized and characterized by various spectroscopic techniques. The single crystal X-ray structure of H2TPP(NO2)(Ph)2Br5 showed a nonplanar saddle shape conformation of the macrocyclic core. Furthermore, the fully optimized geometries confirmed the saddle shape conformation of H2TPP(Ph)2Br5X (X = NO2 or Br). Electronic spectra revealed a significant bathochromic shift by appending both electron donor and acceptor substituents at the β-position of the meso-tetraphenylporphyrin skeleton, which reflects the following order H2TPP < H2TPP(NO2) < H2TPP(NO2)(Ph)2 < H2TPP(Ph)2Br6 < H2TPP(NO2)(Ph)2Br5. H2TPP(Ph)2Br5X (X = NO2 or Br) exhibited a significant bathochromic shift (Δλmax = 53-61 nm) in the Soret band and (Δλmax = 90-95 nm) in the longest wavelength Qx(0,0) band as compared to H2TPP. Nonplanar conformations and electron withdrawing β-substituents induce higher protonation and deprotonation constants for H2TPP(NO2)(Ph)2Br5 and H2TPP(Ph)2Br6 as compared to precursor porphyrins viz. H2TPP, H2TPP(NO2) and H2TPP(NO2)(Ph)2. The electronic spectral properties and redox potentials of MTPP(Ph)2Br5X (X = NO2 or Br and M = 2H, Co, Ni, Cu and Zn) are affected by β-substituents at the periphery of the porphyrin core. Redox tunability was achieved by appending push-pull substituents at the β-position of the MTPP (M = 2H, CoII, NiII, CuII, and ZnII) skeleton of the macrocycle. CuTPP(Ph)2Br6 and CuTPP(NO2)(Ph)2Br5 exhibited a dramatically reduced HOMO-LUMO gap with a difference of 0.55 V and 0.62 V, respectively as compared to CuTPP due to the push-pull effect of β-substituents and nonplanarity of the porphyrin core.
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Affiliation(s)
- Pinki Rathi
- Department of Chemistry, Indian Institute of Technology Roorkee, Roorkee - 247667, India.
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12
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Pang X, Ge J, Yu X, Li Y, Shen F, Wang Y, Ren J. An “off–on” fluorescent naphthalimide-based sensor for anions: its application in visual F− and AcO− discrimination in a self-assembled gel state. NEW J CHEM 2019. [DOI: 10.1039/c9nj01687b] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Abstract
Herein, we report a novel fluorescent organogelator that could discriminate F− from AcO− in both solution and gel systems.
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Affiliation(s)
- Xuelei Pang
- College of Science, and Hebei Research Center of Pharmaceutical and Chemical Engineering
- Hebei University of Science and Technology
- Shijiazhuang 050080
- P. R. China
| | - Junqi Ge
- College of Science, and Hebei Research Center of Pharmaceutical and Chemical Engineering
- Hebei University of Science and Technology
- Shijiazhuang 050080
- P. R. China
| | - Xudong Yu
- College of Science, and Hebei Research Center of Pharmaceutical and Chemical Engineering
- Hebei University of Science and Technology
- Shijiazhuang 050080
- P. R. China
| | - Yajuan Li
- College of Science, and Hebei Research Center of Pharmaceutical and Chemical Engineering
- Hebei University of Science and Technology
- Shijiazhuang 050080
- P. R. China
| | - Fengjuan Shen
- College of Science, and Hebei Research Center of Pharmaceutical and Chemical Engineering
- Hebei University of Science and Technology
- Shijiazhuang 050080
- P. R. China
| | - Yanqiu Wang
- College of Science, and Hebei Research Center of Pharmaceutical and Chemical Engineering
- Hebei University of Science and Technology
- Shijiazhuang 050080
- P. R. China
| | - Jujie Ren
- College of Science, and Hebei Research Center of Pharmaceutical and Chemical Engineering
- Hebei University of Science and Technology
- Shijiazhuang 050080
- P. R. China
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13
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Chaudhri N, Grover N, Sankar M. Selective Conversion of Planar trans-Chlorins into Highly Twisted Doubly Fused Porphyrins or Chlorins via Oxidative Fusion. Inorg Chem 2018; 57:6658-6668. [DOI: 10.1021/acs.inorgchem.8b00849] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
- Nivedita Chaudhri
- Department of Chemistry, Indian Institute of Technology Roorkee, Roorkee 247667, India
| | - Nitika Grover
- Department of Chemistry, Indian Institute of Technology Roorkee, Roorkee 247667, India
| | - Muniappan Sankar
- Department of Chemistry, Indian Institute of Technology Roorkee, Roorkee 247667, India
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14
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Březina V, Ishihara S, Lang J, Hanyková L, Ariga K, Hill JP, Labuta J. Structural Modulation of Chromic Response: Effects of Binding-Site Blocking in a Conjugated Calix[4]pyrrole Chromophore. ChemistryOpen 2018; 7:323-335. [PMID: 29744284 PMCID: PMC5931546 DOI: 10.1002/open.201800005] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/09/2018] [Indexed: 11/06/2022] Open
Abstract
Herein, we modulate the chromic response of a highly colored tetrapyrrole macrocycle, namely, tetrakis(3,5-di-tert-butyl-4-oxocyclohexadien-2,5-yl)porphyrinogen (OxP) by structural modification. N-Benzylation at the macrocyclic nitrogen atoms leads to stepwise elimination of the two calix[4]pyrrole-type binding sites of OxP and serial variation of the chromic properties of the products, double N-benzylated Bz2OxP and tetra N-benzylated Bz4OxP. The halochromic (response to acidity) and solvatochromic (response to solvent polarity) properties were studied by using UV/Vis spectroscopy and NMR spectroscopy in nonpolar organic solvents. Titration experiments were used to generate binding isotherms to elucidate their binding properties with difluoroacetic acid. Differences in the halochromic properties of the compounds allowed construction of a colorimetric scale of acidity in nonpolar solvents, as the compounds in the series OxP, Bz2OxP, and Bz4OxP are increasingly difficult to protonate but maintain their propensity to change color upon protonation. The concurrent effects of binding-site blocking and modulation of acidity sensitivity are important new aspects for the development of colorimetric indicators.
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Affiliation(s)
- Václav Březina
- International Center for Materials Nanoarchitectonics (WPI-MANA) National Institute for Materials Science (NIMS) 1-1 Namiki, Tsukuba Ibaraki 305-0044 Japan.,Faculty of Mathematics and Physics Charles University V Holešovičkách 2 180 00 Prague 8 Czech Republic
| | - Shinsuke Ishihara
- International Center for Materials Nanoarchitectonics (WPI-MANA) National Institute for Materials Science (NIMS) 1-1 Namiki, Tsukuba Ibaraki 305-0044 Japan
| | - Jan Lang
- Faculty of Mathematics and Physics Charles University V Holešovičkách 2 180 00 Prague 8 Czech Republic
| | - Lenka Hanyková
- Faculty of Mathematics and Physics Charles University V Holešovičkách 2 180 00 Prague 8 Czech Republic
| | - Katsuhiko Ariga
- International Center for Materials Nanoarchitectonics (WPI-MANA) National Institute for Materials Science (NIMS) 1-1 Namiki, Tsukuba Ibaraki 305-0044 Japan.,Department of Advanced Materials Science, Graduate School of Frontier Sciences The University of Tokyo 5-1-5 Kashiwanoha, Kashiwa Chiba 277-8561 Japan
| | - Jonathan P Hill
- International Center for Materials Nanoarchitectonics (WPI-MANA) National Institute for Materials Science (NIMS) 1-1 Namiki, Tsukuba Ibaraki 305-0044 Japan
| | - Jan Labuta
- International Center for Materials Nanoarchitectonics (WPI-MANA) National Institute for Materials Science (NIMS) 1-1 Namiki, Tsukuba Ibaraki 305-0044 Japan.,International Center for Young Scientists (ICYS-SENGEN) National Institute for Materials Science (NIMS) 1-2-1 Sengen, Tsukuba Ibaraki 305-0047 Japan
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15
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Lee H, Hong KI, Jang WD. Design and applications of molecular probes containing porphyrin derivatives. Coord Chem Rev 2018. [DOI: 10.1016/j.ccr.2017.06.008] [Citation(s) in RCA: 56] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
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16
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Kielmann M, Prior C, Senge MO. Porphyrins in troubled times: a spotlight on porphyrins and their metal complexes for explosives testing and CBRN defense. NEW J CHEM 2018. [DOI: 10.1039/c7nj04679k] [Citation(s) in RCA: 40] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A critical perspective on (metallo)porphyrins in security-related applications: the past, present and future of explosives detection, CBRN defense, and beyond.
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Affiliation(s)
- Marc Kielmann
- School of Chemistry
- SFI Tetrapyrrole Laboratory
- Trinity Biomedical Sciences Institute
- Trinity College Dublin
- The University of Dublin
| | - Caroline Prior
- School of Chemistry
- SFI Tetrapyrrole Laboratory
- Trinity Biomedical Sciences Institute
- Trinity College Dublin
- The University of Dublin
| | - Mathias O. Senge
- Medicinal Chemistry
- Trinity Translational Medicine Institute
- Trinity Centre for Health Sciences
- Trinity College Dublin
- The University of Dublin
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17
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Chaudhri N, Butcher RJ, Sankar M. Synthesis and structural, photophysical, electrochemical redox and axial ligation properties of highly electron deficient perchlorometalloporphyrins and selective CN− sensing by Co(ii) complexes. NEW J CHEM 2018. [DOI: 10.1039/c7nj04418f] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Synthesis and characterization of MTPP(NO2)Cl7 have been reported. ZnII porphyrins exhibited higher Lewis acidity as compared to perbromoporphyrins. CoII porphyrins were utilized for the selective rapid visual detection of cyanide ions.
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Affiliation(s)
- Nivedita Chaudhri
- Department of Chemistry
- Indian Institute of Technology Roorkee
- Roorkee 247667
- India
| | | | - Muniappan Sankar
- Department of Chemistry
- Indian Institute of Technology Roorkee
- Roorkee 247667
- India
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18
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Chaudhri N, Grover N, Sankar M. Versatile Synthetic Route for β-Functionalized Chlorins and Porphyrins by Varying the Size of Michael Donors: Syntheses, Photophysical, and Electrochemical Redox Properties. Inorg Chem 2017; 56:11532-11545. [DOI: 10.1021/acs.inorgchem.7b01158] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Affiliation(s)
- Nivedita Chaudhri
- Department of Chemistry, Indian Institute of Technology Roorkee, Roorkee 247667, India
| | - Nitika Grover
- Department of Chemistry, Indian Institute of Technology Roorkee, Roorkee 247667, India
| | - Muniappan Sankar
- Department of Chemistry, Indian Institute of Technology Roorkee, Roorkee 247667, India
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19
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Dar TA, Sankar M. Facile Synthesis of Nitrovanillin- Appended Porphyrin and Its Utilization as Potent, Recyclable, Naked-Eye CN−and F−Ion Sensor. ChemistrySelect 2017. [DOI: 10.1002/slct.201701222] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Tawseef Ahmad Dar
- Department of Chemistry; Indian Institute of Technology Roorkee; Roorkee-247667, Uttarakhand India
| | - Muniappan Sankar
- Department of Chemistry; Indian Institute of Technology Roorkee; Roorkee-247667, Uttarakhand India
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20
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21
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Senge MO, MacGowan SA, O'Brien JM. Conformational control of cofactors in nature - the influence of protein-induced macrocycle distortion on the biological function of tetrapyrroles. Chem Commun (Camb) 2016; 51:17031-63. [PMID: 26482230 DOI: 10.1039/c5cc06254c] [Citation(s) in RCA: 135] [Impact Index Per Article: 16.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Abstract
Tetrapyrrole-containing proteins are one of the most fundamental classes of enzymes in nature and it remains an open question to give a chemical rationale for the multitude of biological reactions that can be catalyzed by these pigment-protein complexes. There are many fundamental processes where the same (i.e., chemically identical) porphyrin cofactor is involved in chemically quite distinct reactions. For example, heme is the active cofactor for oxygen transport and storage (hemoglobin, myoglobin) and for the incorporation of molecular oxygen in organic substrates (cytochrome P450). It is involved in the terminal oxidation (cytochrome c oxidase) and the metabolism of H2O2 (catalases and peroxidases) and catalyzes various electron transfer reactions in cytochromes. Likewise, in photosynthesis the same chlorophyll cofactor may function as a reaction center pigment (charge separation) or as an accessory pigment (exciton transfer) in light harvesting complexes (e.g., chlorophyll a). Whilst differences in the apoprotein sequences alone cannot explain the often drastic differences in physicochemical properties encountered for the same cofactor in diverse protein complexes, a critical factor for all biological functions must be the close structural interplay between bound cofactors and the respective apoprotein in addition to factors such as hydrogen bonding or electronic effects. Here, we explore how nature can use the same chemical molecule as a cofactor for chemically distinct reactions using the concept of conformational flexibility of tetrapyrroles. The multifaceted roles of tetrapyrroles are discussed in the context of the current knowledge on distorted porphyrins. Contemporary analytical methods now allow a more quantitative look at cofactors in protein complexes and the development of the field is illustrated by case studies on hemeproteins and photosynthetic complexes. Specific tetrapyrrole conformations are now used to prepare bioengineered designer proteins with specific catalytic or photochemical properties.
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Affiliation(s)
- Mathias O Senge
- School of Chemistry, SFI Tetrapyrrole Laboratory, Trinity Biomedical Sciences Institute, Trinity College Dublin, The University of Dublin, 152-160 Pearse Street, Dublin 2, Ireland and Medicinal Chemistry, Institute of Molecular Medicine, Trinity Centre for Health Sciences, Trinity College Dublin, St. James's Hospital, Dublin 8, Ireland.
| | - Stuart A MacGowan
- School of Chemistry, SFI Tetrapyrrole Laboratory, Trinity Biomedical Sciences Institute, Trinity College Dublin, The University of Dublin, 152-160 Pearse Street, Dublin 2, Ireland
| | - Jessica M O'Brien
- Medicinal Chemistry, Institute of Molecular Medicine, Trinity Centre for Health Sciences, Trinity College Dublin, St. James's Hospital, Dublin 8, Ireland.
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22
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Kumar R, Chaudhri N, Sankar M. Ratiometric and colorimetric "naked eye" selective detection of CN(-) ions by electron deficient Ni(II) porphyrins and their reversibility studies. Dalton Trans 2016; 44:9149-57. [PMID: 25901694 DOI: 10.1039/c5dt00937e] [Citation(s) in RCA: 33] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Highly electron deficient β-substituted Ni(II) porphyrins (1-5) were synthesized and utilized as novel sensors for selective rapid visual detection of CN(-) ions. This article describes the single crystal X-ray structures, electronic spectral and electrochemical redox properties of these sensors. The ratiometric and colorimetric responses of these porphyrins were monitored by the change in optical absorption spectra. These sensors were found to be highly selective for cyanide ions with extremely high binding constants (10(16)-10(8) M(-2)) through axial ligation of CN(-) ions and are able to detect <0.11 ppm of CN(-) ions. 1-5 were recovered from 1-5·2CN(-) adducts by acid treatment and reused without loss of sensing ability. CN(-) binding strongly perturbs the redox properties of the parent porphyrin π-system. The applicability of 1-5 as practical visible colorimetric test kits for CN(-) ions in aqueous and non-aqueous media has also been explored. The mode of binding was confirmed by single crystal X-ray, spectroscopic studies and DFT calculations.
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Affiliation(s)
- Ravi Kumar
- Department of Chemistry, Indian Institute of Technology Roorkee, Roorkee 2476667, Uttarakhand, India.
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23
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Kumar R, Yadav P, Rathi P, Sankar M. Synthesis, spectroscopic, electrochemical redox, solvatochromism and anion binding properties of β-tetra- and -octaphenylethynyl substituted meso-tetraphenylporphyrins. RSC Adv 2015. [DOI: 10.1039/c5ra15211a] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023] Open
Abstract
β-Phenylethynyl (PE) porphyrins exhibited unique photophysical properties and solvatochromic behavior due to ICT from the porphyrin core to PE moieties. Further, Zn(ii) porphyrins were utilized for anion sensing.
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Affiliation(s)
- Ravi Kumar
- Department of Chemistry
- Indian Institute of Technology Roorkee
- Roorkee - 247667
- India
| | - Pinky Yadav
- Department of Chemistry
- Indian Institute of Technology Roorkee
- Roorkee - 247667
- India
| | - Pinki Rathi
- Department of Chemistry
- Indian Institute of Technology Roorkee
- Roorkee - 247667
- India
| | - Muniappan Sankar
- Department of Chemistry
- Indian Institute of Technology Roorkee
- Roorkee - 247667
- India
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24
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Chahal MK, Sankar M. Porphyrin chemodosimeters: synthesis, electrochemical redox properties and selective ‘naked-eye’ detection of cyanide ions. RSC Adv 2015. [DOI: 10.1039/c5ra19847j] [Citation(s) in RCA: 40] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
β-Dicyanovinyl substituted porphyrins have been synthesized and utilized as chemodosimeters for ratiometric and colorimetric sensing of cyanide ions in CH3CN and H2O/CH3CN mixture.
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Affiliation(s)
- Mandeep K. Chahal
- Department of Chemistry
- Indian Institute of Technology Roorkee
- Roorkee-247667
- India
| | - Muniappan Sankar
- Department of Chemistry
- Indian Institute of Technology Roorkee
- Roorkee-247667
- India
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25
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Shiraishi Y, Nakamura M, Hirai T. Effects of substituents on fluorometric detection of cyanide anions by indolium–coumarin dyads. Phys Chem Chem Phys 2015; 17:25027-36. [DOI: 10.1039/c5cp03877d] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Fluorometric detection of cyanide anions was carried out with indolium–coumarin dyads in aqueous media. Substituents on the dyads strongly affect the selectivity, sensitivity, and response to cyanide anions.
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Affiliation(s)
- Yasuhiro Shiraishi
- Research Center for Solar Energy Chemistry
- and Division of Chemical Engineering
- Graduate School of Engineering Science
- Osaka University
- Toyonaka 560-8531
| | - Masaya Nakamura
- Research Center for Solar Energy Chemistry
- and Division of Chemical Engineering
- Graduate School of Engineering Science
- Osaka University
- Toyonaka 560-8531
| | - Takayuki Hirai
- Research Center for Solar Energy Chemistry
- and Division of Chemical Engineering
- Graduate School of Engineering Science
- Osaka University
- Toyonaka 560-8531
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