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García Daza FA, Puertas AM, Cuetos A, Patti A. Insight into the Viscoelasticity of Self-Assembling Smectic Liquid Crystals of Colloidal Rods from Active Microrheology Simulations. J Chem Theory Comput 2024; 20:1579-1589. [PMID: 37390389 PMCID: PMC10902840 DOI: 10.1021/acs.jctc.3c00356] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/02/2023]
Abstract
The rheology of colloidal suspensions is of utmost importance in a wide variety of interdisciplinary applications in formulation technology, determining equally interesting questions in fundamental science. This is especially intriguing when colloids exhibit a degree of long-range positional or orientational ordering, as in liquid crystals (LCs) of elongated particles. Along with standard methods, microrheology (MR) has emerged in recent years as a tool to assess the mechanical properties of materials at the microscopic level. In particular, by active MR one can infer the viscoelastic response of a soft material from the dynamics of a tracer particle being dragged through it by external forces. Although considerable efforts have been made to study the diffusion of guest particles in LCs, little is known about the combined effect of tracer size and directionality of the dragging force on the system's viscoelastic response. By dynamic Monte Carlo simulations, we apply active MR to investigate the viscoelasticity of self-assembling smectic (Sm) LCs consisting of rodlike particles. In particular, we track the motion of a spherical tracer whose size is varied within a range of values matching the system's characteristic length scales and being dragged by constant forces that are parallel, perpendicular, or at 45° to the nematic director. Our results reveal a uniform value of the effective friction coefficient as probed by the tracer at small and large forces, whereas a nonlinear, force-thinning regime is observed at intermediate forces. However, at relatively weak forces the effective friction is strongly determined by correlations between the tracer size and the structure of the host fluid. Moreover, we also show that external forces forming an angle with the nematic director provide additional details that cannot be simply inferred from the mere analysis of parallel and perpendicular forces. Our results highlight the fundamental interplay between tracer size and force direction in assessing the MR of Sm LC fluids.
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Affiliation(s)
- Fabián A García Daza
- Department of Physical, Chemical and Natural Systems, Pablo de Olavide University, 41013 Sevilla, Spain
- Department of Chemical Engineering, The University of Manchester, Manchester M13 9PL, United Kingdom
| | - Antonio M Puertas
- Department of Chemistry and Physics, University of Almeriá, 04120 Almería, Spain
| | - Alejandro Cuetos
- Department of Physical, Chemical and Natural Systems, Pablo de Olavide University, 41013 Sevilla, Spain
| | - Alessandro Patti
- Department of Chemical Engineering, The University of Manchester, Manchester M13 9PL, United Kingdom
- Department of Applied Physics, University of Granada, Avenida Fuente Nueva s/n, 18071 Granada, Spain
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García Daza FA, Puertas AM, Cuetos A, Patti A. Microrheology of isotropic and liquid-crystalline phases of hard rods by dynamic Monte Carlo simulations. J Mol Liq 2022. [DOI: 10.1016/j.molliq.2022.120146] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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Lobo-Cabrera FJ, Patti A, Govantes F, Cuetos A. Polymer-induced microcolony compaction in early biofilms: A computer simulation study. Phys Rev E 2021; 103:052407. [PMID: 34134235 DOI: 10.1103/physreve.103.052407] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/26/2020] [Accepted: 04/19/2021] [Indexed: 01/06/2023]
Abstract
Microscopic organisms, such as bacteria, have the ability of colonizing surfaces and developing biofilms that can determine diseases and infections. Most bacteria secrete a significant amount of extracellular polymer substances that are relevant for biofilm stabilization and growth. In this work, we apply computer simulation and perform experiments to investigate the impact of polymer size and concentration on early biofilm formation and growth. We observe as bacterial cells formed loose, disorganized clusters whenever the effect of diffusion exceeded that of cell growth and division. Addition of model polymeric molecules induced particle self-assembly and aggregation to form compact clusters in a polymer size- and concentration-dependent fashion. We also find that large polymer size or concentration lead to the development of intriguing stripe-like and dendritic colonies. The results obtained by Brownian dynamic simulation closely resemble the morphologies that we experimentally observe in biofilms of a Pseudomonas Putida strain with added polymers. The analysis of the Brownian dynamic simulation results suggests the existence of a threshold polymer concentration that distinguishes between two growth regimes. Below this threshold, the main force driving polymer-induced compaction is the hindrance of bacterial cell diffusion, while collective effects play a minor role. Above this threshold, especially for large polymers, polymer-induced compaction is a collective phenomenon driven by depletion forces. Well above this concentration threshold, severely limited diffusion drives the formation of filaments and dendritic colonies.
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Affiliation(s)
| | - Alessandro Patti
- Department of Chemical Engineering and Analytical Science, The University of Manchester, Manchester M13 9PL, United Kingdom
| | - Fernando Govantes
- Centro Andaluz de Biología del Desarrollo (Universidad Pablo de Olavide, Consejo Superior de Investigaciones Científicas y Junta de Andalucía) and Departamento de Biología Molecular e Ingeniería Bioquímica, Universidad Pablo de Olavide, 41013 Sevilla, Spain
| | - Alejandro Cuetos
- Department of Physical, Chemical and Natural Systems, Pablo de Olavide University, 41013 Sevilla, Spain
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Cuetos A, Patti A. Dynamics of hard colloidal cuboids in nematic liquid crystals. Phys Rev E 2020; 101:052702. [PMID: 32575326 DOI: 10.1103/physreve.101.052702] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2020] [Accepted: 03/18/2020] [Indexed: 06/11/2023]
Abstract
We perform dynamic Monte Carlo simulations to investigate the equilibrium dynamics of hard board-like colloidal particles in oblate and prolate nematic liquid crystals. In particular, we characterize the particles' diffusion along the nematic director and perpendicularly to it, and observe a structural relaxation decay that strongly depends on the particle anisotropy. To assess the Gaussianity of their dynamics and eventual occurrence of collective motion, we calculate two- and four-point correlation functions that incorporate the instantaneous values of the diffusion coefficients parallel and perpendicular to the nematic director. Our simulation results highlight the occurrence of Fickian and Gaussian dynamics at short and long times, locate the minimum diffusivity at the self-dual shape, the particle geometry that would preferentially stabilise biaxial nematics, and exclude the existence of dynamically correlated particles.
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Affiliation(s)
- Alejandro Cuetos
- Department of Physical, Chemical and Natural Systems, Pablo de Olavide University, 41013 Sevilla, Spain
| | - Alessandro Patti
- Department of Chemical Engineering and Analytical Science, The University of Manchester, Manchester M13 9PL, United Kingdom
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Morillo N, Patti A, Cuetos A. Brownian dynamics simulations of oblate and prolate colloidal particles in nematic liquid crystals. J Chem Phys 2019; 150:204905. [DOI: 10.1063/1.5090975] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022] Open
Affiliation(s)
- Neftalí Morillo
- Department of Physical, Chemical and Natural Systems, Pablo de Olavide University, 41013 Sevilla, Spain
| | - Alessandro Patti
- School of Chemical Engineering and Analytical Science, The University of Manchester, Manchester M13 9PL, United Kingdom
| | - Alejandro Cuetos
- Department of Physical, Chemical and Natural Systems, Pablo de Olavide University, 41013 Sevilla, Spain
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Affiliation(s)
- Michael P. Allen
- Department of Physics, University of Warwick, Coventry, UK
- H. H. Wills Physics Laboratory, Royal Fort, Bristol, UK
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Bakker HE, Dussi S, Droste BL, Besseling TH, Kennedy CL, Wiegant EI, Liu B, Imhof A, Dijkstra M, van Blaaderen A. Phase diagram of binary colloidal rod-sphere mixtures from a 3D real-space analysis of sedimentation-diffusion equilibria. SOFT MATTER 2016; 12:9238-9245. [PMID: 27792237 DOI: 10.1039/c6sm02162j] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
Self-assembly of binary particle systems offers many new opportunities for materials science. Here, we studied sedimentation equilibria of silica rods and spheres, using quantitative 3D confocal microscopy. We determined not only pressure, density and order parameter profiles, but also the experimental phase diagram exhibiting a stable binary smectic liquid-crystalline phase (Sm2). Using computer simulations we confirmed that the Sm2-phase can be stabilized by entropy alone, which opens up the possibility of combining new materials properties at a wide array of length scales.
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Affiliation(s)
- Henriëtte E Bakker
- Soft Condensed Matter, Debye Institute for Nanomaterials Science, Utrecht University, Princetonplein 5, 3584 CC Utrecht, The Netherlands.
| | - Simone Dussi
- Soft Condensed Matter, Debye Institute for Nanomaterials Science, Utrecht University, Princetonplein 5, 3584 CC Utrecht, The Netherlands.
| | - Barbera L Droste
- Soft Condensed Matter, Debye Institute for Nanomaterials Science, Utrecht University, Princetonplein 5, 3584 CC Utrecht, The Netherlands.
| | - Thijs H Besseling
- Soft Condensed Matter, Debye Institute for Nanomaterials Science, Utrecht University, Princetonplein 5, 3584 CC Utrecht, The Netherlands.
| | - Chris L Kennedy
- Soft Condensed Matter, Debye Institute for Nanomaterials Science, Utrecht University, Princetonplein 5, 3584 CC Utrecht, The Netherlands.
| | - Evert I Wiegant
- Soft Condensed Matter, Debye Institute for Nanomaterials Science, Utrecht University, Princetonplein 5, 3584 CC Utrecht, The Netherlands.
| | - Bing Liu
- Soft Condensed Matter, Debye Institute for Nanomaterials Science, Utrecht University, Princetonplein 5, 3584 CC Utrecht, The Netherlands.
| | - Arnout Imhof
- Soft Condensed Matter, Debye Institute for Nanomaterials Science, Utrecht University, Princetonplein 5, 3584 CC Utrecht, The Netherlands.
| | - Marjolein Dijkstra
- Soft Condensed Matter, Debye Institute for Nanomaterials Science, Utrecht University, Princetonplein 5, 3584 CC Utrecht, The Netherlands.
| | - Alfons van Blaaderen
- Soft Condensed Matter, Debye Institute for Nanomaterials Science, Utrecht University, Princetonplein 5, 3584 CC Utrecht, The Netherlands.
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Cuetos A, Patti A. Equivalence of Brownian dynamics and dynamic Monte Carlo simulations in multicomponent colloidal suspensions. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2015; 92:022302. [PMID: 26382401 DOI: 10.1103/physreve.92.022302] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/10/2015] [Indexed: 06/05/2023]
Abstract
We propose a simple but powerful theoretical framework to quantitatively compare Brownian dynamics (BD) and dynamic Monte Carlo (DMC) simulations of multicomponent colloidal suspensions. By extending our previous study focusing on monodisperse systems of rodlike colloids, here we generalize the formalism described there to multicomponent colloidal mixtures and validate it by investigating the dynamics in isotropic and liquid crystalline phases containing spherical and rodlike particles. In order to investigate the dynamics of multicomponent colloidal systems by DMC simulations, it is key to determine the elementary time step of each species and establish a unique timescale. This is crucial to consistently study the dynamics of colloidal particles with different geometry. By analyzing the mean-square displacement, the orientation autocorrelation functions, and the self part of the van Hove correlation functions, we show that DMC simulation is a very convenient and reliable technique to describe the stochastic dynamics of any multicomponent colloidal system. Our theoretical formalism can be easily extended to any colloidal system containing size and/or shape polydisperse particles.
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Affiliation(s)
- Alejandro Cuetos
- Department of Physical, Chemical and Natural Systems, Universidad Pablo Olavide, 41013 Sevilla, Spain
| | - Alessandro Patti
- School of Chemical Engineering and Analytical Science, The University of Manchester, Sackville Street, Manchester M13 9PL, United Kingdom
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