Porphyrin Atropisomerism as a Molecular Engineering Tool in Medicinal Chemistry, Molecular Recognition, Supramolecular Assembly, and Catalysis

Porphyrin atropisomerism, which arises from restricted σ-bond rotation between the macrocycle and a sufficiently bulky substituent, was identified in 1969 by Gottwald and Ullman in 5,10,15,20-tetrakis(o-hydroxyphenyl)porphyrins. Henceforth, an entirely new field has emerged utilizing this transformative tool. This review strives to explain the consequences of atropisomerism in porphyrins, the methods which have been developed for their separation and analysis and present the diverse array of applications. Porphyrins alone possess intriguing properties and a structure which can be easily decorated and molded for a specific function. Therefore, atropisomerism serves as a transformative tool, making it possible to obtain even a specific molecular shape. Atropisomerism has been thoroughly exploited in catalysis and molecular recognition yet presents both challenges and opportunities in medicinal chemistry.

Recognition of Amino Acid Salts by Temperature-Dependent Allosteric Binding with Stereodynamic Urea Receptors

Positive homotropic artificial allosteric systems are important for the regulation of cooperativity, selectivity and nonlinear amplification. Stereodynamic homotropic allosteric receptors can transmit and amplify induced chirality by the first ligand binding to axial chirality between two chromophores. We herein report stereodynamic allosteric urea receptors consisting of a rotational shaft as the axial chirality unit, terphenyl units as structural transmission sites and four urea units as binding sites. NMR titration experiments revealed that the receptor can bind two carboxylate guests in a positive homotropic allosteric manner attributed to the inactivation by intramolecular hydrogen-bonding between urea units within the receptor. In addition, the VT-CD spectra observed upon binding of the urea receptor with l- or D-amino acid salts in MeCN showed interesting temperature-dependent Cotton effects, based on the differences of the receptor shaft unit and the guest structure. The successful discrimination of hydrocarbon-based side chains of amino acid salts indicated that the input of chiral and steric information for the guest was amplified as outputs of the Cotton effect and the temperature-dependence of VT-CD spectra through cooperativity of positive allosteric binding.

Dynamic Metalloporphyrin-Based [2]Rotaxane Molecular Shuttles Stimulated by Neutral Lewis Base and Anion Coordination

A series of dynamic metalloporphyrin [2]rotaxane molecular shuttles comprising of bis-functionalised Zn(II) porphyrin axle and pyridyl functionalised macrocycle components are prepared in high yield via active metal template synthetic methodology. Extensive variable temperature 1 H NMR and quantitative UV-Vis spectroscopic titration studies demonstrate dynamic macrocycle translocation is governed by an inter-component co-ordination interaction between the macrocycle pyridyl and axle Zn(II) metalloporphyrin, which serves to bias a 'resting state' co-conformation. The dynamic shuttling behaviour of the interlocked structures is dramatically inhibited by the addition of a neutral Lewis base such as pyridine, but can also be tuned via post-synthetic rotaxane demetallation of the porphyrin axle core to give free-base, or upon subsequent metallation, Ni(II) [2]rotaxane analogues. Importantly, the Lewis acidic Zn(II) porphyrin axle component is also capable of coordinating anions which induces mechanical bond shuttling behaviour resulting in a novel optical sensing response.

Nickel(II) monobenzoporphyrins and chlorins: synthesis, electrochemistry and anion sensing properties

A series of nickel(II) monobenzochlorins (MBCs) and monobenzoporphyrins (MBPs) containing β-appended or meso,β-fused indanedione (IND) or malononitrile (MN) groups were synthesized and characterized for their physicochemical, electrochemical and anion sensing properties. Each investigated compound contained four meso-phenyl rings and a single β,β'-fused 4,5-di(methoxycarbonyl)benzene ring, with the chlorins represented as NiMBC(Y)₂(R)₄ and the porphyrins as NiMBP(Y^F)₂, where Y is an indanedione (IND) or malononitrile (MN) group, R = H or Br and Y^F is a meso,β-fused IND or MN substituent. One of the investigated compounds, NiMBP(IND)₂, was structurally characterized and shown to possess a ruffled macrocyclic conformation. The monobenzochlorins, NiMBC(IND)₂, NiMBC(IND)₂Br₄ and NiMBC(MN)₂, reversibly respond to basic anions such as CN^-, F^-, OAc^- and H₂PO₄^- through a visible color change assigned to the deprotonation of the vicinal proton on the appended IND or MN substituents. The malononitrile-fused Ni^II monobenzoporphyrin, NiMBP(MN)₂, exhibited a selective but irreversible visual detection of cyanide ions (LOD = 2.23 ppm). This reaction afforded a tri-fused π-extended monobenzoporphyrin product represented as NiMBP(VCN)₂ (where VCN = meso,β-fused vinyl cyanide) in non-aqueous media and proceeded via anion induced electron transfer (AIET). The in situ generated π-extended porphyrin was also isolated and characterized as to its physicochemical and electrochemical properties and found to possess a narrow electrochemical HOMO-LUMO gap of 1.46 V along with a near-IR (NIR) absorption band located at 861 nm.

Halogen-Bonding Strapped Porphyrin BODIPY Rotaxanes for Dual Optical and Electrochemical Anion Sensing

Anion receptors employing two distinct sensory mechanisms are rare. Herein, we report the first examples of halogen-bonding porphyrin BODIPY [2]rotaxanes capable of both fluorescent and redox electrochemical sensing of anions. 1 H NMR, UV/visible and electrochemical studies revealed rotaxane axle triazole group coordination to the zinc(II) metalloporphyrin-containing macrocycle component, serves to preorganise the rotaxane binding cavity and dramatically enhances anion binding affinities. Mechanically bonded, integrated-axle BODIPY and macrocycle strapped metalloporphyrin motifs enable the anion recognition event to be sensed by the significant quenching of the BODIPY fluorophore and cathodic perturbations of the metalloporphyrin P/P+. redox couple.

Bioinspired Applications of Porphyrin Derivatives

Porphyrin derivatives are ubiquitous in nature and have important biological roles, such as in light harvesting, oxygen transport, and catalysis. Owing to their intrinsic π-conjugated structure, porphyrin derivatives exhibit characteristic photophysical and electrochemical properties. In biological systems, porphyrin derivatives are associated with various protein molecules through noncovalent interactions. For example, hemoglobin, which is responsible for oxygen transport in most vertebrates, consists of four subunits of a globular protein with an iron porphyrin derivative prosthetic group. Furthermore, noncovalently arranged porphyrin derivatives are the fundamental chromophores in light-harvesting systems for photosynthesis in plants and algae. These biologically important roles originate from the functional versatility of porphyrin derivatives. Specifically, porphyrins are excellent host compounds, forming coordination complexes with various metal ions that adds functionality to the porphyrin unit, such as redox activity and additional ligand binding at the central metal ion. In addition, porphyrins are useful building blocks for functional supramolecular assemblies because of their flat and symmetrical molecular architectures, and their excellent photophysical properties are typically utilized for the fabrication of bioactive functional materials. In this Account, we summarize our endeavors over the past decade to develop functional materials based on porphyrin derivatives using bioinspired approaches. In the first section, we discuss several synthetic receptors that act as artificial allosteric host systems and can be used for the selective detection of various chemicals, such as cyanide, chloride, and amino acids. In the second section, we introduce multiporphyrin arrays as mimics of natural light-harvesting complexes. The active control of energy transfer processes by additional guest binding and the fabrication of organic photovoltaic devices using porphyrin derivatives are also introduced. In the third section, we introduce several types of porphyrin-based supramolecular assemblies. Through noncovalent interactions such as metal-ligand interaction, hydrogen bonding, and π-π interaction, porphyrin derivatives were constructed as supramolecular polymers with formation of fiber or toroidal assembly. In the last section, the application of porphyrin derivatives for biomedical nanodevice fabrication is introduced. Even though porphyrins were good candidates as photosensitizers for photodynamic therapy, they have limitations for biomedical application owing to aggregation in aqueous media. We suggested ionic dendrimer porphyrins and they showed excellent photodynamic therapy (PDT) efficacy.

Strategic Synthesis of 'Picket Fence' Porphyrins Based on Nonplanar Macrocycles

Traditional 'picket fence' porphyrin systems have been a topic of interest for their capacity to direct steric shielding effects selectively to one side of the macrocycle. Sterically overcrowded porphyrin systems that adopt macrocycle deformations have recently drawn attention for their applications in organocatalysis and sensing. Here we explore the combined benefits of nonplanar porphyrins and the old molecular design to bring new concepts to the playing field. The challenging ortho-positions of meso-phenyl residues in dodecasubstituted porphyrin systems led us to transition to less hindered para- and meta-sites and develop selective demethylation based on the steric interplay. Isolation of the symmetrical target compound [2,3,7,8,12,13,17,18-octaethyl-5,10,15,20-tetrakis(3,5-dipivaloyloxyphenyl)porphyrin] was investigated under two synthetic pathways. The obtained insight was used to isolate unsymmetrical [2,3,7,8,12,13,17,18-octaethyl-5,10,15,20-tetrakis(2-nitro-5-pivaloyloxyphenyl)porphyrin]. Upon separation of the atropisomers, a detailed single-crystal X-ray crystallographic analysis highlighted intrinsic intermolecular interactions. The nonplanarity of these systems in combination with 'picket fence' motifs provides an important feature in the design of supramolecular ensembles.

Access to 2-Alkyl/Aryl-4-(1H)-Quinolones via Orthogonal "NH3" Insertion into o-Haloaryl Ynones: Total Synthesis of Bioactive Pseudanes, Graveoline, Graveolinine, and Waltherione F

An efficient one-pot synthesis of 4-(1H)-quinolones through an orthogonal engagement of diverse o-haloaryl ynones with ammonia in the presence of Cu(I), involving tandem Michael addition and ArCsp₂-N coupling, is presented. The substrate scope of this convenient protocol, wherein ammonium carbonate acts as both an in situ ammonia source and a base toward diverse 2-substituted 4-(1H)-quinolones, has been mapped and its efficacy validated through concise total synthesis of bioactive natural products pseudanes (IV, VII, VIII, and XII), graveoline, graveolinine, and waltherione F.

Enhanced circular dichroism at elevated temperatures through complexation-induced transformation of a three-layer cyclophane with dualistic dynamic helicity

When two planes stacked one above the other are twisted, they provide a dynamic pair of helical conformations with (M)- or (P)-helicity. We designed a three-layer cyclophane that consists of two such dynamic pairs: the top and middle planes, and the middle and bottom planes. Hence, several global conformations could be created for the overall molecule, e.g., double-helical forms with a pair with the same helicity [(M,M) or (P,P)], and a meso-like form with a pair with a different helicity (M,P). These conformations dynamically interconvert to each other in solution. Chiroptical properties were given by the helical-sense preference of the double-helical forms, which was brought about through complexation with a chiral hydrogen-bonding guest. In terms of the conformational energy in a complexed state, when a desirable relationship between double-helical and meso-like forms was attained, complexation-induced circular dichroism was enhanced at elevated temperatures and decreased at lowered temperatures.

Triazole-bearing calixpyrroles: strong halide binding affinities through multiple N–H and C–H hydrogen bonds

Triazole-bearing calixpyrroles (TCPs) were synthesized as artificial anion binding receptors.

Effective ensemble system for the identification of CN− based on a cobalt(ii) complex: a logic gate mimic

A novel reaction-based sensor [4-hydroxy-6-methyl-3-(1-(3-methylpyridin-2-ylimine)ethyl)-2H-chromene-2-one-Co²⁺] has been synthesized for the sensitive and selective detection of CN⁻.

Metal-based optical chemosensors for CN- detection

This critical review focuses on recent advances (2010-2015) in the detection of cyanide anion via metal-based optical chemosensors in which a change in colour and/or fluorescence intensity (or emission wavelength) of a molecular metal complex is determined by the direct interaction of the metal centre with this anion.

Off–on fluorometric detection of cyanide anions in an aqueous mixture by an indane-based receptor

An indanedione–coumarin conjugate behaves as an off–on type fluorescent receptor for rapid, selective, and sensitive detection of cyanide anions in an aqueous mixture via a nucleophilic interaction with the electrophilic β-carbon of the receptor.

Efficiency parameters in artificial allosteric systems

It is shown that the conformational energy ΔG_C required for the formation of a suitable cavity or cleft for ligand binding in absence of an effector E is the essential factor for the efficiency of synthetic allosteric systems with positive cooperativity.

Switching between porphyrin, porphodimethene and porphyrinogen using cyanide and fluoride ions mimicking volatile molecular memory and the ‘NOR’ logic gate

β-Substituted porphyrins were developed as a quantitatively operating “lab-on-a-molecule” for the detection of F⁻and CN⁻ions, by switching between porphyrin, porphodimethene and porphyrinogen along with distinct solution colour changes and reversibility.

A pyrylium–coumarin dyad as a colorimetric receptor for ratiometric detection of cyanide anions by two absorption bands in the visible region

A pyrylium–coumarin dyad behaves as a colorimetric receptor for ratiometric detection of cyanide anions in aqueous media by two absorption bands in the visible wavelength region.

A reversible fluorescent chemosensor for the rapid sensing of CN− in water: utilization of the intramolecular charge transfer blocking

A reversible fluorescent sensor combines naphthyridine groups as signaling subunits and the presence of the active hydrogen of the primary amine confers the recognition capacity toward cyanide ions in water.

A diarylethene-derived probe for colorimetric detection of CN−and highly selective fluorescent recognition of I−

A new photochromic diarylethene with 2-hydrazinobenzothiazole was synthesized, and its multi-controllable switching behavior specially interacting with light, CN⁻and I⁻was investigated systematically.

Porphyrin chemodosimeters: synthesis, electrochemical redox properties and selective ‘naked-eye’ detection of cyanide ions

β-Dicyanovinyl substituted porphyrins have been synthesized and utilized as chemodosimeters for ratiometric and colorimetric sensing of cyanide ions in CH₃CN and H₂O/CH₃CN mixture.

New approach for post-functionalization of meso-formylporphyrins

An approach for the transformation of formyl groups into areneimidazoles at a porphyrin substrate is developed, allowing straightforward design of new polytopic porphyrinoid compounds.