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El-hoshoudy AN. Experimental and Theoretical Investigation of Glycol-Based Hydrogels through Waterflooding Processes in Oil Reservoirs Using Molecular Dynamics and Dissipative Particle Dynamics Simulation. ACS OMEGA 2021; 6:30224-30240. [PMID: 34805657 PMCID: PMC8600538 DOI: 10.1021/acsomega.1c01533] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/22/2021] [Accepted: 06/15/2021] [Indexed: 06/13/2023]
Abstract
Enhanced oil processing aims to retrieve petroleum fluids from depleted reservoirs after traditional processing. Hydrogels and polymeric macromolecules are considered effective displacing agents in oil reservoirs. In the current work, the authors used hydrophilic hydrogels based on poly(ethylene glycol)/poly(propylene glycol) (PEG/PPG) surfmers for oil displacement processes. Statistical modeling of the rheological properties at 80 °C for the two hydrogels indicates that the viscosity-shearing profile obeys the power-law model. Also, shear stress scanning follows the Herschel-Bulkley and the Bingham plastic models. The two hydrogels exhibit an initial yield stress owing to the formation of a three-dimensional (3D) structure at zero shearings. Furthermore, PEG and PPG hydrogels can retain the viscosity after a shear rate of 64.68 S-1. On the scale of surface activity, the two hydrogels exhibit higher surface areas (A m) of 0.1088 and 0.1058 nm2 and lower surface excess concentrations (Γm) of 1.529 and 1.567 × 1010 mol/cm2, respectively. A molecular dynamics (MD) simulation was conducted to explore the Flory-Huggins chi parameter, the solubility parameter, and the cohesive energy density. The results indicate a negative magnitude of chi parameter (χ ij ) for water and salt, which indicates that the two hydrogels have a good tendency toward saline formation water in the underground petroleum reservoir. Furthermore, the dissipative particle dynamics (DPD) was performed on a mesoscale to investigate the interfacial tension, the radius of gyration, the concentration profile, and the radial distribution function. The increased radius of gyration (R g) confirms that the two hydrogels are more overextended and can align perpendicularly toward the water/oil boundary. Experimental displacement was operated on a linear sandpack model using different slug concentrations. The oil recovery factor, the water-cut, and the differential pressure data during the flooding process were estimated as a function of the injected pore volume. The obtained results show that the oil recovery factor reaches 72 and 88% in the cases of PEG and PPG hydrogels at 80 °C with concentrations of 1.0 and 1.5 g/L, which reveals that both hydrogels are effective enhanced oil recovery (EOR) agents for the depleted reservoirs. This study establishes a new route that employs MD and DPD simulation in the field of enhanced oil recovery and the petroleum industry.
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2
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Hong W, Lin J, Tian X, Wang L. Linear and nonlinear viscoelasticity of self-associative hydrogen-bonded polymers. POLYMER 2021. [DOI: 10.1016/j.polymer.2021.124301] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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3
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Lenzi V, Ramos MMD, Marques LSA. Dissipative particle dynamics simulations of end-cross-linked nanogels. MOLECULAR SIMULATION 2020. [DOI: 10.1080/08927022.2020.1859111] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
Affiliation(s)
- Veniero Lenzi
- Center of Physics of Universities of Minho and Porto, University of Minho, Campus de Gualtar, Braga, Portugal
| | - Marta M. D. Ramos
- Center of Physics of Universities of Minho and Porto, University of Minho, Campus de Gualtar, Braga, Portugal
| | - Luís S. A. Marques
- Center of Physics of Universities of Minho and Porto, University of Minho, Campus de Gualtar, Braga, Portugal
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4
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How is a micelle formed from amphiphilic polymers in a dialysis process: Insight from mesoscopic studies. Chem Phys Lett 2020. [DOI: 10.1016/j.cplett.2020.137711] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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5
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Drozdov AD, deClaville Christiansen J. Mechanical response and equilibrium swelling of thermoresponsive copolymer hydrogels. POLYM INT 2020. [DOI: 10.1002/pi.6051] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Affiliation(s)
- Aleksey D Drozdov
- Department of Materials and Production Aalborg University Aalborg Denmark
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Abstract
Cardiovascular diseases (CVDs) pose a serious threat to human health, which are characterized by high disability and mortality rate globally such as myocardial infarction (MI), atherosclerosis, and heart failure. Although stem cells transplantation and growth factors therapy are promising, their low survival rate and loss at the site of injury are major obstacles to this therapy. Recently, the development of hydrogel scaffold materials provides a new way to solve this problem, which have shown the potential to treat CVD. Among these scaffold materials, environmentally responsive hydrogels have great prospects in repairing the microenvironment of cardiovascular tissues and vascular regeneration. They provide a new method for the treatment of cardiovascular tissue repair and space-time control for the release of various therapeutic drugs, including small-molecule drugs, growth factors, and stem cells. Herein, this article reviews the occurrence and current treatment of CVD, as well as the repair of cardiovascular injury by several environmental responsive hydrogels systems currently used, mainly focusing on the delivery of growth factors or the application of cell therapy to revascularization. In addition, we will also discuss the enormous potential and personal perspectives of environmentally responsive hydrogels in cardiovascular repair.
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Schneible JD, Singhal A, Lilova RL, Hall CK, Grafmüller A, Menegatti S. Tailoring the Chemical Modification of Chitosan Hydrogels to Fine-Tune the Release of a Synergistic Combination of Chemotherapeutics. Biomacromolecules 2019; 20:3126-3141. [PMID: 31310515 DOI: 10.1021/acs.biomac.9b00707] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Abstract
Combination chemotherapy with a defined ratio and sequence of drug release is a clinically established and effective route to treat advanced solid tumors. In this context, a growing body of literature demonstrates the potential of hydrogels constructed with chemically modified polysaccharides as depots for controlled release of chemotherapeutics. Identifying the appropriate modification in terms of physicochemical properties of the functional group and its degree of substitution (χ) to achieve the desired release profile for multiple drugs is, however, a complex multivariate problem. To address this issue, we have developed a computational toolbox that models the migration of a drug pair through a hydrated network of polysaccharide chains modified with hydrophobic moieties. In this study, we chose doxorubicin (DOX) and Gemcitabine (GEM) as model drugs, as their synergistic effect against breast cancer has been thoroughly investigated, and chitosan as the model polymer. Our model describes how the modification of chitosan chains with acetyl, butanoyl, and heptanoyl moieties at different values χ governs both the structure of the hydrogel network and drug migration through it. Our experimental data confirm the in silico predictions for both single- and dual-drug release and, most notably, the counterintuitive inversion of release vs χ that occurs when switching from a single- to a dual-drug system. Consensus between predicted and experimental data indicates that acetyl modifications (χ = 32-42%) and butanoyl modifications (χ = 19-24%) provide synergistic GEM/DOX release molar ratios (i.e., 5-10). Collectively, these results demonstrate the potential of this model in guiding the design of chemotherapeutic hydrogels to combat cancer.
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Affiliation(s)
- John D Schneible
- Department of Chemical and Biomolecular Engineering , North Carolina State University , Raleigh , North Carolina 27695 , United States
| | - Ankush Singhal
- Department of Theory and Biosystems , Max Planck Institute for Colloids and Interfaces , Potsdam 14476 , Germany
| | - Radina L Lilova
- Department of Chemical and Biomolecular Engineering , North Carolina State University , Raleigh , North Carolina 27695 , United States
| | - Carol K Hall
- Department of Chemical and Biomolecular Engineering , North Carolina State University , Raleigh , North Carolina 27695 , United States
| | - Andrea Grafmüller
- Department of Theory and Biosystems , Max Planck Institute for Colloids and Interfaces , Potsdam 14476 , Germany
| | - Stefano Menegatti
- Department of Chemical and Biomolecular Engineering , North Carolina State University , Raleigh , North Carolina 27695 , United States
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8
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Goodarzi F, Zendehboudi S. Effects of Salt and Surfactant on Interfacial Characteristics of Water/Oil Systems: Molecular Dynamic Simulations and Dissipative Particle Dynamics. Ind Eng Chem Res 2019. [DOI: 10.1021/acs.iecr.9b00504] [Citation(s) in RCA: 45] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Affiliation(s)
- Fatemeh Goodarzi
- Faculty of Engineering and Applied Science, Memorial University, St. John’s, NL A1B 3X5, Canada
| | - Sohrab Zendehboudi
- Faculty of Engineering and Applied Science, Memorial University, St. John’s, NL A1B 3X5, Canada
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Rudyak VY, Gavrilov AA, Kozhunova EY, Chertovich AV. Shell-corona microgels from double interpenetrating networks. SOFT MATTER 2018; 14:2777-2781. [PMID: 29633777 DOI: 10.1039/c8sm00170g] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
Polymer microgels with a dense outer shell offer outstanding features as universal carriers for different guest molecules. In this paper, microgels formed by an interpenetrating network comprised of collapsed and swollen subnetworks are investigated using dissipative particle dynamics (DPD) computer simulations, and it is found that such systems can form classical core-corona structures, shell-corona structures, and core-shell-corona structures, depending on the subchain length and molecular mass of the system. The core-corona structures consisting of a dense core and soft corona are formed at small microgel sizes when the subnetworks are able to effectively separate in space. The most interesting shell-corona structures consist of a soft cavity in a dense shell surrounded with a loose corona, and are found at intermediate gel sizes; the area of their existence depends on the subchain length and the corresponding mesh size. At larger molecular masses the collapsing network forms additional cores inside the soft cavity, leading to the core-shell-corona structure.
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Affiliation(s)
- Vladimir Yu Rudyak
- Lomonosov Moscow State University, Faculty of Physics, Moscow, 119991, Russia.
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Zhang S, Geryak R, Geldmeier J, Kim S, Tsukruk VV. Synthesis, Assembly, and Applications of Hybrid Nanostructures for Biosensing. Chem Rev 2017; 117:12942-13038. [DOI: 10.1021/acs.chemrev.7b00088] [Citation(s) in RCA: 206] [Impact Index Per Article: 29.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
- Shuaidi Zhang
- School of Materials Science
and Engineering, Georgia Institute of Technology, Atlanta, Georgia 30332-0245, United States
| | - Ren Geryak
- School of Materials Science
and Engineering, Georgia Institute of Technology, Atlanta, Georgia 30332-0245, United States
| | - Jeffrey Geldmeier
- School of Materials Science
and Engineering, Georgia Institute of Technology, Atlanta, Georgia 30332-0245, United States
| | - Sunghan Kim
- School of Materials Science
and Engineering, Georgia Institute of Technology, Atlanta, Georgia 30332-0245, United States
| | - Vladimir V. Tsukruk
- School of Materials Science
and Engineering, Georgia Institute of Technology, Atlanta, Georgia 30332-0245, United States
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Lykov K, Nematbakhsh Y, Shang M, Lim CT, Pivkin IV. Probing eukaryotic cell mechanics via mesoscopic simulations. PLoS Comput Biol 2017; 13:e1005726. [PMID: 28922399 PMCID: PMC5619828 DOI: 10.1371/journal.pcbi.1005726] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2017] [Revised: 09/28/2017] [Accepted: 08/16/2017] [Indexed: 11/18/2022] Open
Abstract
Cell mechanics has proven to be important in many biological processes. Although there is a number of experimental techniques which allow us to study mechanical properties of cell, there is still a lack of understanding of the role each sub-cellular component plays during cell deformations. We present a new mesoscopic particle-based eukaryotic cell model which explicitly describes cell membrane, nucleus and cytoskeleton. We employ Dissipative Particle Dynamics (DPD) method that provides us with the unified framework for modeling of a cell and its interactions in the flow. Data from micropipette aspiration experiments were used to define model parameters. The model was validated using data from microfluidic experiments. The validated model was then applied to study the impact of the sub-cellular components on the cell viscoelastic response in micropipette aspiration and microfluidic experiments.
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Affiliation(s)
- Kirill Lykov
- Institute of Computational Science, Faculty of Informatics, USI Lugano, Lugano, Switzerland
| | - Yasaman Nematbakhsh
- NUS Graduate School for Integrative Sciences and Engineering, National University of Singapore, Singapore, Singapore
- Department of Biomedical Engineering, National University of Singapore, Singapore, Singapore
| | - Menglin Shang
- BioSystems and Micromechanics (BioSyM) IRG, Singapore-MIT Alliance for Research and Technology (SMART) Centre, Singapore, Singapore
| | - Chwee Teck Lim
- NUS Graduate School for Integrative Sciences and Engineering, National University of Singapore, Singapore, Singapore
- Department of Biomedical Engineering, National University of Singapore, Singapore, Singapore
- Mechanobiology Institute, National University of Singapore, Singapore, Singapore
| | - Igor V. Pivkin
- Institute of Computational Science, Faculty of Informatics, USI Lugano, Lugano, Switzerland
- Swiss Institute of Bioinformatics, Lausanne, Switzerland
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12
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Decuzzi P. Facilitating the Clinical Integration of Nanomedicines: The Roles of Theoretical and Computational Scientists. ACS NANO 2016; 10:8133-8. [PMID: 27604416 DOI: 10.1021/acsnano.6b05536] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/07/2023]
Abstract
Since the launch of multiple research initiatives on nanotechnology applied to medicine in the early 2000s, a plethora of nanomedicines have been developed that exhibit great therapeutic efficacy in preclinical models but yet minimal impact in daily clinical practice. The successful and complete clinical fruition of nanomedicines requires addressing three major technical challenges: improving loading efficacy and on-command release, modulating recognition and sequestration by immune cells, and maximizing accumulation at biological targets. In this Perspective, I describe how theoretical and computational models can help address each of these challenges. This armamentarium represents an ideal tool for maximizing the therapeutic efficacy of nanomedicines, thus facilitating their integration into daily clinical operations.
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Affiliation(s)
- Paolo Decuzzi
- Laboratory of Nanotechnology for Precision Medicine, Fondazione Istituto Italiano di Tecnologia Via Morego 30, Genoa 16163, Italy
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Pavlov AS, Khalatur PG. Filler reinforcement in cross-linked elastomer nanocomposites: insights from fully atomistic molecular dynamics simulation. SOFT MATTER 2016; 12:5402-5419. [PMID: 27225453 DOI: 10.1039/c6sm00543h] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
Using a fully atomistic model, we perform large-scale molecular dynamics simulations of sulfur-cured polybutadiene (PB) and nanosilica-filled PB composites. A well-integrated network without sol fraction is built dynamically by cross-linking the coarse-grained precursor chains in the presence of embedded silica nanoparticles. Initial configurations for subsequent atomistic simulations are obtained by reverse mapping of the well-equilibrated coarse-grained systems. Based on the concept of "maximally inflated knot" introduced by Grosberg et al., we show that the networks simulated in this study behave as mechanically isotropic systems. Analysis of the network topology in terms of graph theory reveals that mechanically inactive tree-like structures are the dominant structural components of the weakly cross-linked elastomer, while cycles are mainly responsible for the transmission of mechanical forces through the network. We demonstrate that quantities such as the system density, thermal expansion coefficient, glass transition temperature and initial Young's modulus can be predicted in qualitative and sometimes even in quantitative agreement with experiments. The nano-filled system demonstrates a notable increase in the glass transition temperature and an approximately two-fold increase in the nearly equilibrium value of elastic modulus relative to the unfilled elastomer even at relatively small amounts of filler particles. We also examine the structural rearrangement of the nanocomposite subjected to tensile deformation. Under high strain-rate loading, the formation of structural defects (microcavities) within the polymer bulk is observed. The nucleation and growth of cavities in the post-yielding strain hardening regime mainly take place at the elastomer/nanoparticle interfaces. As a result, the cavities are concentrated just near the embedded nanoparticles. Therefore, while the silica nanofiller increases the elastic modulus of the elastomer, it also creates a more defective structure of higher energy in comparison with the unfilled network.
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Affiliation(s)
- Alexander S Pavlov
- Department of Physical Chemistry, Tver State University, Tver, 170100, Russia.
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14
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Fully atomistic molecular dynamics simulation of nanosilica-filled crosslinked polybutadiene. Chem Phys Lett 2016. [DOI: 10.1016/j.cplett.2016.04.061] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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15
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Nikolov SV, Shum H, Balazs AC, Alexeev A. Computational design of microscopic swimmers and capsules: From directed motion to collective behavior. Curr Opin Colloid Interface Sci 2016. [DOI: 10.1016/j.cocis.2015.10.012] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
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16
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Yong X. Modeling the Assembly of Polymer-Grafted Nanoparticles at Oil-Water Interfaces. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2015; 31:11458-11469. [PMID: 26439456 DOI: 10.1021/acs.langmuir.5b03405] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
Using dissipative particle dynamics (DPD), I model the interfacial adsorption and self-assembly of polymer-grafted nanoparticles at a planar oil-water interface. The amphiphilic core-shell nanoparticles irreversibly adsorb to the interface and create a monolayer covering the interface. The polymer chains of the adsorbed nanoparticles are significantly deformed by surface tension to conform to the interface. I quantitatively characterize the properties of the particle-laden interface and the structure of the monolayer in detail at different surface coverages. I observe that the monolayer of particles grafted with long polymer chains undergoes an intriguing liquid-crystalline-amorphous phase transition in which the relationship between the monolayer structure and the surface tension/pressure of the interface is elucidated. Moreover, my results indicate that the amorphous state at high surface coverage is induced by the anisotropic distribution of the randomly grafted chains on each particle core, which leads to noncircular in-plane morphology formed under excluded volume effects. These studies provide a fundamental understanding of the interfacial behavior of polymer-grafted nanoparticles for achieving complete control of the adsorption and subsequent self-assembly.
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Affiliation(s)
- Xin Yong
- Department of Mechanical Engineering, State University of New York at Binghamton , Binghamton, New York 13902, United States
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