1
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Inclusion of organic molecule guests by sulfinyl bridged bis-salicyclic acid-type open-chain host with flexible change of crystal structure. J INCL PHENOM MACRO 2022. [DOI: 10.1007/s10847-022-01166-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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2
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Sakamoto A, Budiutama GP, Takayama Y, Morohashi N, Hattori T. Synthesis and resolution of a chiral open-chain host having a partial structure of p-tert-butylsulfinylcalix[4]arene. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 2022. [DOI: 10.1246/bcsj.20210438] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Atsuya Sakamoto
- Department of Biomolecular Engineering, Graduate School of Engineering, Tohoku University, 6-6-11 Aramaki-Aoba, Aoba-ku, Sendai, 980-8579, Japan
| | - Gekko Patria Budiutama
- Department of Biomolecular Engineering, Graduate School of Engineering, Tohoku University, 6-6-11 Aramaki-Aoba, Aoba-ku, Sendai, 980-8579, Japan
| | - Yoshihiro Takayama
- Department of Biomolecular Engineering, Graduate School of Engineering, Tohoku University, 6-6-11 Aramaki-Aoba, Aoba-ku, Sendai, 980-8579, Japan
| | - Naoya Morohashi
- Department of Biomolecular Engineering, Graduate School of Engineering, Tohoku University, 6-6-11 Aramaki-Aoba, Aoba-ku, Sendai, 980-8579, Japan
| | - Tetsutaro Hattori
- Department of Biomolecular Engineering, Graduate School of Engineering, Tohoku University, 6-6-11 Aramaki-Aoba, Aoba-ku, Sendai, 980-8579, Japan
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3
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Shen C, Phe RZH, Fong I, Sobolev AN, Mocerino M, Massi M, Ogden MI. Structure, derivatisation, and metal complexation of p-cyclohexylcalix[4]arene. Supramol Chem 2021. [DOI: 10.1080/10610278.2021.1959920] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Affiliation(s)
- Chao Shen
- School of Molecular and Life Sciences, Curtin University, Perth, WA, Australia
| | - Rene Z. H. Phe
- School of Molecular and Life Sciences, Curtin University, Perth, WA, Australia
| | - Isabella Fong
- School of Molecular and Life Sciences, Curtin University, Perth, WA, Australia
| | - Alexandre N. Sobolev
- School of Molecular Sciences, M310, University of Western Australia, Perth, WA, Australia
| | - Mauro Mocerino
- School of Molecular and Life Sciences, Curtin University, Perth, WA, Australia
| | - Massimiliano Massi
- School of Molecular and Life Sciences, Curtin University, Perth, WA, Australia
| | - Mark I. Ogden
- School of Molecular and Life Sciences, Curtin University, Perth, WA, Australia
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4
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Miyoshi I, Sonehara H, Ogihara J, Matsumoto T, Morohashi N, Hattori T. Inclusion of Amine Isomers with Open-Chain Hosts Having a Partial Structure of p-tert-Butylthiacalixarene. J Org Chem 2021; 86:7046-7058. [PMID: 33890780 DOI: 10.1021/acs.joc.1c00225] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Porous materials, which can capture a specific compound from a hard-to-separate molecular mixture, are strongly desired for practical separation and purification processes. Aiming to develop such materials, we have investigated the performance of our original host compounds, [3,3'-thiobis(5-tert-butyl-2-hydroxybenzene)-1,1'-diyl]diacetic acid (2) and its monopropyl ester (3), in discriminating among regio- or stereoisomers of three groups of amines, 2-, 3-, and 4-methylpyridine, 2-, 6-, and 8-methylquinoline, and cis- and trans-4-cyclohexanamine. Diacid 2 selectively included 4-methylpyridine in hexane and 3-methylpyridine in toluene in competitive inclusion among the three regioisomers. Mechanistic studies revealed that the inclusions of 3- and 4-methylpyridine are favored under kinetic and thermodynamic control, respectively. Solvent-dependent switching in guest selectivity was also observed in competitive inclusion among the methylquinoline isomers with diacid 2, whereas trans-4-methylcyclohexanamine was selectively included over the cis-isomer by monoester 3, as well as diacid 2, regardless of the solvent employed. X-ray crystallographic analysis of the resulting inclusion crystals suggests that the wide guest scope of the host compounds originates from their flexible ability to form complexes with amines.
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Affiliation(s)
- Ikuko Miyoshi
- Department of Biomolecular Engineering, Graduate School of Engineering, Tohoku University, 6-6-11 Aramaki-Aoba, Sendai 980-8579, Japan
| | - Hayato Sonehara
- Department of Biomolecular Engineering, Graduate School of Engineering, Tohoku University, 6-6-11 Aramaki-Aoba, Sendai 980-8579, Japan
| | - Jun Ogihara
- Department of Biomolecular Engineering, Graduate School of Engineering, Tohoku University, 6-6-11 Aramaki-Aoba, Sendai 980-8579, Japan
| | - Tomoaki Matsumoto
- Department of Biomolecular Engineering, Graduate School of Engineering, Tohoku University, 6-6-11 Aramaki-Aoba, Sendai 980-8579, Japan
| | - Naoya Morohashi
- Department of Biomolecular Engineering, Graduate School of Engineering, Tohoku University, 6-6-11 Aramaki-Aoba, Sendai 980-8579, Japan
| | - Tetsutaro Hattori
- Department of Biomolecular Engineering, Graduate School of Engineering, Tohoku University, 6-6-11 Aramaki-Aoba, Sendai 980-8579, Japan
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5
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Miyoshi I, Kitamoto Y, Maeda T, Morohashi N, Hattori T. Enantioselective inclusion of pyrene-1-sulfonate salts of α-amino acids with crystals of α-cyclodextrin. Tetrahedron 2020. [DOI: 10.1016/j.tet.2020.131100] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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6
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Inclusion abilities towards hexyne isomers by co-crystallization with extended V-shaped host molecule. Tetrahedron 2019. [DOI: 10.1016/j.tet.2019.130576] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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7
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Dwarkanath N, Palchowdhury S, Balasubramanian S. Unraveling the Sorption Mechanism of CO 2 in a Molecular Crystal without Intrinsic Porosity. J Phys Chem B 2019; 123:7471-7481. [PMID: 31368698 DOI: 10.1021/acs.jpcb.9b05999] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
The facile uptake of CO2 gas in a nonporous molecular crystal constituted by long molecules with carbazole and ethynylphenyl moieties was reported in experiments recently. Herein, the mechanism of gas uptake by this crystal is elucidated using atomistic molecular simulations. The uptake of CO2 is shown to be facilitated by (i) the capacity of the crystal to expand in volume because of weak intermolecular interactions, (ii) the parallel orientation of the long molecules in the crystal, and (iii) the ability of the molecule to marginally bend, yet not lose crystallinity because of the anchoring of the terminal carbazole groups. The retention of crystallinity upon sorption and desorption cycles is also demonstrated. At high enough pressures, near-neighbor CO2 molecules sorbed in the crystal are found to be oriented parallel to each other.
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Affiliation(s)
- Nimish Dwarkanath
- Chemistry and Physics of Materials Unit , Jawaharlal Nehru Centre for Advanced Scientific Research , Bangalore 560 064 , India
| | - Sourav Palchowdhury
- Chemistry and Physics of Materials Unit , Jawaharlal Nehru Centre for Advanced Scientific Research , Bangalore 560 064 , India
| | - S Balasubramanian
- Chemistry and Physics of Materials Unit , Jawaharlal Nehru Centre for Advanced Scientific Research , Bangalore 560 064 , India
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8
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Morohashi N, Nanbu K, Sonehara H, Ogihara J, Shimazaki T, Hattori T. Design and Synthesis of Open-Chain Hosts Having a Partial Structure of p-tert-Butylthiacalixarene. J Org Chem 2018; 83:2235-2243. [DOI: 10.1021/acs.joc.7b03137] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Naoya Morohashi
- Department of Biomolecular Engineering,
Graduate School of Engineering, Tohoku University, 6-6-11 Aramaki-Aoba, Aoba-ku, Sendai 980-8579, Japan
| | - Kazuki Nanbu
- Department of Biomolecular Engineering,
Graduate School of Engineering, Tohoku University, 6-6-11 Aramaki-Aoba, Aoba-ku, Sendai 980-8579, Japan
| | - Hayato Sonehara
- Department of Biomolecular Engineering,
Graduate School of Engineering, Tohoku University, 6-6-11 Aramaki-Aoba, Aoba-ku, Sendai 980-8579, Japan
| | - Jun Ogihara
- Department of Biomolecular Engineering,
Graduate School of Engineering, Tohoku University, 6-6-11 Aramaki-Aoba, Aoba-ku, Sendai 980-8579, Japan
| | - Takanori Shimazaki
- Department of Biomolecular Engineering,
Graduate School of Engineering, Tohoku University, 6-6-11 Aramaki-Aoba, Aoba-ku, Sendai 980-8579, Japan
| | - Tetsutaro Hattori
- Department of Biomolecular Engineering,
Graduate School of Engineering, Tohoku University, 6-6-11 Aramaki-Aoba, Aoba-ku, Sendai 980-8579, Japan
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9
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Morohashi N, Hattori T. Selective guest inclusion by crystals of calixarenes: potential for application as separation materials. J INCL PHENOM MACRO 2018. [DOI: 10.1007/s10847-018-0783-3] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
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10
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Morohashi N, Ebata K, Hattori T. Recovery of host crystals from inclusion crystals of p-tert-butylcalix[4]arene and p-tert-butylthiacalix[4]arene by the treatment with a solvent and/or supercritical CO2. J INCL PHENOM MACRO 2018. [DOI: 10.1007/s10847-017-0778-5] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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11
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Martins FT, Oliveira BGD, Sarotti AM, de Fátima Â. Winged-Cone Conformation in Hexa- p-tert-butylcalix[6]arene Driven by the Unusually Strong Guest Encapsulation. ACS OMEGA 2017; 2:5315-5323. [PMID: 31457800 PMCID: PMC6641646 DOI: 10.1021/acsomega.7b00900] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/30/2017] [Accepted: 08/21/2017] [Indexed: 06/10/2023]
Abstract
Hexa-p-tert-butylcalix[6]arene (1) is believed to adopt a winged conformation in a solution, featured by four phenyl rings perpendicular to the calix basis and two others at 1,4-positions lying down. However, there is some controversy on the occurrence of this conformation because it has never been found in the solid state of calix[6]arenes, regardless of the substitution pattern at lower and upper rims. Here, we have observed the winged-cone conformation for the first time in a solvate form of 1 with dimethyl sulfoxide (DMSO), dimethylformamide, and pyridine. The DMSO molecule is strongly encapsulated into 1 through two OH···O hydrogen bonds with both flattened phenolic moieties, one lp(S)···π and four CH···π interactions with the four perpendicular phenyl rings. This host-guest complex has energy lower by 23.4 kcal mol-1 than the isolated species. In addition, another DMSO solvate form with 1,2,3-alternate conformation was also obtained in this study, and its structure is compared with that of the precedent one. A detailed density functional theory study has also been carried out to understand the energetic relationships among cone conformers, intramolecular hydrogen-bonding patterns, and DMSO encapsulation.
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Affiliation(s)
- Felipe Terra Martins
- Instituto
de Química, Universidade Federal
de Goiás, P.O. Box 131, 74690-900 Goiânia, Brazil
- Grupo
de Estudos em Química Orgânica e Biológica (GEQOB),
Departamento de Química, Instituto de Ciências Exatas, Universidade Federal de Minas Gerais, Av. Pres. Antônio Carlos
6627, 31270-901 Belo Horizonte, Brazil
| | - Breno Germano de
Freitas Oliveira
- Grupo
de Estudos em Química Orgânica e Biológica (GEQOB),
Departamento de Química, Instituto de Ciências Exatas, Universidade Federal de Minas Gerais, Av. Pres. Antônio Carlos
6627, 31270-901 Belo Horizonte, Brazil
| | - Ariel M. Sarotti
- Instituto
de Química Rosario (IQUIR), Universidad
Nacional de Rosario-CONICET, Suipacha 531, S2002LRK Rosario, Argentina
| | - Ângelo de Fátima
- Grupo
de Estudos em Química Orgânica e Biológica (GEQOB),
Departamento de Química, Instituto de Ciências Exatas, Universidade Federal de Minas Gerais, Av. Pres. Antônio Carlos
6627, 31270-901 Belo Horizonte, Brazil
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