Electron Presolvation in Tetrahydrofuran-Incorporated Supramolecular Sodium Entities

Alkali metal atoms can repopulate their valence electrons toward solvation due to impact from solvents or microsurroundings and provide the remaining alkali metal cations for coordinating with a variety of specific solvents, forming various electron-expanded complexes or solvated ionic pairs with special interactions. Such special solute-solvent interactions not only affect their electronic structures but also enable the formation of entirely new species. Taking Na(THF)_n (n = 1-6, THF = tetrahydrofuran) and Na₂@THF complexes as typical representatives, density functional theory calculations are carried out to explore the solvation of a sodium atom and its dimer in THF and characterize their complexes as solvent-incorporated supramolecular entities and particularly valence electron presolvation due to their interaction with solvent THF. Electron presolvation is caused by the Pauli repulsion between THF containing a coordinating O atom with a lone pair of electrons and the alkali metal Na or Na₂ containing valence electrons, and THF coordination to them forces their valence electrons to redistribute, which can be easily realized in such solvents. Compared with strongly bound valance electrons of alkali metal atoms, THF coordination enables Na or Na₂ electrons to exhibit much more active states (i.e., the presolvated states) featuring small vertical detachment energies of electrons and distorted diffuse distributions in the frames of the generally structured metal cation complexes, acting as the electron-expanded chemical entities. Furthermore, the degree of electron diffusion and the polarity of the Na-Na bond are proportional to the coordination number (n) and the coordination number difference (Δn) between two Na centers in Na₂@THF. The unique properties of such entities are also discussed. This work offers a theoretical support to the supramolecular entities formed by alkali-metal atoms or their dimers with ligands containing O or N and uncovers the unique electron presolvation phenomena and also enriches our understanding of the novel metal atom complexes.

Nitro rotation tuned dissociative electron attachment upon targeted radiosensitizer 4-substituted Z bases

In this work, a set of new potential radiation sensitizers (4-substituted Z-bases: 4XZ, X = F, Cl, Br, and I) are designed based on the artificial 6-amino-5-nitro-3-(1'-β-D-2'-deoxyribofuranosyl)-2(1H)-pyridone (Z), which can selectively bind to breast cancer cells. The calculated electron affinities in water solution show that the halogenated Z-bases are efficient electron acceptors which possess significant electron-withdrawing characters following the order of 4XZ > Z ≫ U. To ensure the effective electron attachment induced dissociation, we constructed the energy profiles related to the X-C bond cleavage of neutral and anionic bases. The results show that the X-C bond becomes relatively weak after the electron attachment. In particular, the electron induced dehalogenations of (4BrZ)^- and (4IZ)^- are low-barrier and exothermic, which support a high radiosensitivity. Furthermore, we characterized the vibrational excitation effect on the dissociative electron attachment, which demonstrates that the charge distribution can be regulated by the rotation-induced structural distortion accompanied by the electron localization on the nitro group. Also examined is the influence of base pairing on the dehalogenation, which is not only conducive to the electron-driven dissociation but is also beneficial to the stabilization of related products. The current study suggests 4BrZ and 4IZ can be regarded as potential targeted radiosensitizers with possible applications in reducing the side effects in radiotherapy.

Mechanisms Responsible for High Energy Radiation Induced Damage to Single-Stranded DNA Modified by Radiosensitizing 5-Halogenated Deoxyuridines

Experimental studies showed that high energy radiation induced base release and DNA backbone breaks mainly occur at the neighboring 5' nucleotide when a single-stranded DNA is modified by radiosensitizing 5-halogenated deoxyuridines. However, no mechanism can be used to interpret these experimental observations. To better understand the radiosensitivity of 5-halogenated deoxyuridines, mechanisms involving hydrogen abstraction by the uracil-5-yl radical from the C2' and C3' positions of an adjacent nucleotide separately followed by the C3'-O3' or N-glycosidic bond rupture and the P-O3' bond breakage are investigated in the DNA sequence 5'-TU(•)-3' employing density functional theory calculations in the present study. It is found that hydrogen abstractions from both positions are comparable with the one from the C2' site slightly more favorable. The N-glycosidic bond cleavage in the neighboring 5' nucleotide following the internucleotide C2'-Ha abstraction is estimated to have the lowest activation free energies, indicating that the adjacent 5' base release dominates electron induced damage to single-stranded DNA incorporated by 5-halogenated deoxyuridines. Relative to the P-O3' bond breakage after the internucleotide C3'-H abstraction, the C3'-O3' bond rupture in the neighboring 5' nucleotide following the internucleotide C2'-Ha abstraction is predicted to have a lower activation free energy, implying that single-stranded DNA backbone breaks are prone to occur at the C3'-O3' bond site. The 5'-TU(•)-3' species has substantial electron affinity and can even capture a hydrated electron, forming the 5'-TU(-)-3' anion. However, the electron induced C3'-O3' bond rupture in 5'-TU(-)-3' anion via a pathway of internucleotide proton abstraction is only minor in both the gas phase and aqueous solution. The present theoretical predictions can interpret rationally experimental observations, thereby demonstrating that the mechanisms proposed here are responsible for high energy radiation induced damage to single-stranded DNA incorporated by radiosensitizing 5-halogenated deoxyuridines. By comparing with previous results, our work proves that the radiosensitizing action of 5-bromo-2-deoxyuridine is not weaker but stronger than its isomer 6-bromo-2-deoxyuridine on the basis of the available data.