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Parsons BF, Hulce MR, Ackerman JR, Reardon KA, Pappas ES, Kettler LE. Ultraviolet Excitation of M-O 2 (M = Phenalenone, Fluorenone, Pyridine, & Acridine) Complexes Resulting in 1O 2. J Phys Chem A 2024; 128:2971-2981. [PMID: 38579334 DOI: 10.1021/acs.jpca.4c00143] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/07/2024]
Abstract
In our experiment, a trace amount of an organic molecule (M = 1H-phenalen-1-one, 9-fluorenone, pyridine, or acridine) was seeded into a gas mix consisting of 3% O2 with a rare gas buffer (He or Ar) and then supersonically expanded. We excited the resulting molecular beam with ultraviolet light at either 355 nm (1H-phenalen-1-one, 9-fluorenone, or acridine) or 266 nm (pyridine) and used resonance enhanced multiphoton ionization (REMPI) spectroscopy to probe for the formation of O2 in the a-1Δg state, 1O2. For all systems, the REMPI spectra demonstrate that ultraviolet excitation results in the formation of 1O2 and the oxygen product is confirmed to be in the ground vibrational state and with an effective rotational temperature below 80 K. We then recorded the velocity map ion image of the 1O2 product. From the ion images, we determined the center-of-mass translational energy distribution, P(ET), assuming photodissociation of a bimolecular M-O2 complex. We also report results from electronic structure calculations that allow for a determination of the M-O2 ground state binding energy. We use the complex binding energy, the energy to form 1O2, and the adiabatic triplet energy for each organic molecule to determine the available energy following photodissociation. For dissociation of a bimolecular complex, this available energy may be partitioned into either center-of-mass recoil or internal degrees of freedom of the organic moiety. We use the available energy to generate a Prior distribution, which predicts statistical energy partitioning during dissociation. For low available energies, less than 0.2 eV, we find that the statistical prediction is in reasonable agreement with the experimental observations. However, at higher available energies, the experimental distribution is biased to lower center-of-mass kinetic energies compared with the statistical prediction, which suggests the complex undergoes vibrational predissociation.
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Affiliation(s)
- Bradley F Parsons
- Department of Chemistry and Biochemistry 2500 California Plaza, Creighton University, Omaha, Nebraska 68178, United States
| | - Martin R Hulce
- Department of Chemistry and Biochemistry 2500 California Plaza, Creighton University, Omaha, Nebraska 68178, United States
| | - John R Ackerman
- Department of Chemistry and Biochemistry 2500 California Plaza, Creighton University, Omaha, Nebraska 68178, United States
| | - Kylie A Reardon
- Department of Chemistry and Biochemistry 2500 California Plaza, Creighton University, Omaha, Nebraska 68178, United States
| | - Emerson S Pappas
- Department of Chemistry and Biochemistry 2500 California Plaza, Creighton University, Omaha, Nebraska 68178, United States
| | - Lauren E Kettler
- Department of Chemistry and Biochemistry 2500 California Plaza, Creighton University, Omaha, Nebraska 68178, United States
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Jarrold CC. Probing Anion-Molecule Complexes of Atmospheric Relevance Using Anion Photoelectron Detachment Spectroscopy. ACS PHYSICAL CHEMISTRY AU 2022; 3:17-29. [PMID: 36718261 PMCID: PMC9881448 DOI: 10.1021/acsphyschemau.2c00060] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/30/2022] [Revised: 12/08/2022] [Accepted: 12/09/2022] [Indexed: 01/01/2023]
Abstract
Bimolecular reaction and collision complexes that drive atmospheric chemistry and contribute to the absorption of solar radiation are fleeting and therefore inherently challenging to study experimentally. Furthermore, primary anions in the troposphere are short lived because of a complicated web of reactions and complex formation they undergo, making details of their early fate elusive. In this perspective, the experimental approach of photodetaching mass-selected anion-molecule complexes or complex anions, which prepares neutrals in various vibronic states, is surveyed. Specifically, the application of anion photoelectron spectroscopy along with photoelectron-photofragment coincidence spectroscopy toward the study of collision complexes, complex anions in which a partial covalent bond is formed, and radical bimolecular reaction complexes, with relevance in tropospheric chemistry, will be highlighted.
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Baptista MS, Cadet J, Greer A, Thomas AH. Practical Aspects in the Study of Biological Photosensitization Including Reaction Mechanisms and Product Analyses: A Do's and Don'ts Guide †. Photochem Photobiol 2022; 99:313-334. [PMID: 36575651 DOI: 10.1111/php.13774] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2022] [Accepted: 12/24/2022] [Indexed: 12/29/2022]
Abstract
The interaction of light with natural matter leads to a plethora of photosensitized reactions. These reactions cause the degradation of biomolecules, such as DNA, lipids, proteins, being therefore detrimental to the living organisms, or they can also be beneficial by allowing the treatment of several diseases by photomedicine. Based on the molecular mechanistic understanding of the photosensitization reactions, we propose to classify them in four processes: oxygen-dependent (type I and type II processes) and oxygen-independent [triplet-triplet energy transfer (TTET) and photoadduct formation]. In here, these processes are discussed by considering a wide variety of approaches including time-resolved and steady-state techniques, together with solvent, quencher, and scavenger effects. The main aim of this survey is to provide a description of general techniques and approaches that can be used to investigate photosensitization reactions of biomolecules together with basic recommendations on good practices. Illustration of the suitability of these approaches is provided by the measurement of key biomarkers of singlet oxygen and one-electron oxidation reactions in both isolated and cellular DNA. Our work is an educational review that is mostly addressed to students and beginners.
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Affiliation(s)
- Maurício S Baptista
- Department of Biochemistry, Institute of Chemistry, Universidade de São Paulo, São Paulo, Brazil
| | - Jean Cadet
- Département de Médecine Nucléaire et de Radiobiologie, Université de Sherbrooke, Sherbrooke, Québec, Canada
| | - Alexander Greer
- Department of Chemistry, Brooklyn College, Brooklyn, New York, USA.,Ph.D. Program in Chemistry, The Graduate Center of the City University of New York, New York, New York, USA
| | - Andrés H Thomas
- Instituto de Investigaciones Fisicoquímicas Teóricas y Aplicadas (INIFTA), Departamento de Química, Facultad de Ciencias Exactas, Universidad Nacional de La Plata (UNLP), CCT La Plata-CONICET, La Plata, Argentina
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Parsons BF, Freitag MA, Warder HJ. Singlet O 2 Produced by Ultraviolet Dissociation of the β-ionone-O 2 Complex. J Phys Chem A 2021; 125:8649-8657. [PMID: 34554753 DOI: 10.1021/acs.jpca.1c06669] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
We formed the gas-phase β-ionone-O2 complex in a supersonic expansion and then photodissociated the complex with light near 312 nm. Photodissociation resulted in the production of O2 in the a 1Δg state, which was ionized at 312 nm using (2 + 1) resonance-enhanced multiphoton ionization (REMPI). We recorded the 1O2 REMPI action spectrum and O2+ velocity map ion image following photodissociation of the complex. From the velocity map image, we determined the total recoil kinetic energy distribution from dissociation of the complex. Fitting the REMPI spectrum showed that the 1O2 product has an effective rotational temperature of about 50 K, while the recoil kinetic energy distribution was well fit with a statistical Boltzmann distribution having an effective translational temperature of 289 K. Using the average translational energy from the Boltzmann fit along with the complex dissociation energy from ab initio calculations, we determined that β-ionone was formed with an average of 2.87 eV of internal energy, which was 0.49 eV higher than previous measurements for the β-ionone triplet-state energy. Our own CCSD/cc-pVDZ//(U)MP2/cc-pVDZ calculations gave a minimum triplet-state energy of 2.04 eV. However, a large structural change occurs between the minimum singlet-ground-state geometry and the minimum triplet-excited-state geometry, and as a result, the calculated vertical energy for the triplet-state β-ionone was determined to be 3.30 eV. Comparing the ab initio and experimental results indicated that following excitation, β-ionone was formed in the triplet state but with significant internal vibrational energy. As such, complex dissociation likely proceeds following internal vibrational energy redistribution, which explains the statistical recoil kinetic energy distribution.
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Affiliation(s)
- Bradley F Parsons
- Department of Chemistry and Biochemistry, Creighton University, 2500 California Plaza, Omaha, Nebraska 68178, United States
| | - Mark A Freitag
- Department of Chemistry and Biochemistry, Creighton University, 2500 California Plaza, Omaha, Nebraska 68178, United States
| | - Hunter J Warder
- Department of Chemistry and Biochemistry, Creighton University, 2500 California Plaza, Omaha, Nebraska 68178, United States
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Parsons BF, Szpunar DE. Investigation of O 2-X (X = Pyrrole or Pyridine) Cluster Photodissociation Near 226 nm. J Phys Chem A 2020; 124:10152-10161. [PMID: 33232146 DOI: 10.1021/acs.jpca.0c09323] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
We have recorded the O-atom velocity map photofragment ion images resulting from the photodissociation of O2-pyrrole and O2-pyridine clusters near 226 nm. To record the images, the O-atom photoproduct was state-selectively ionized and projected onto a two-dimensional (2D) position-sensitive detector. The resulting ion images from the clusters show evidence for three dissociation pathways. In the images from either cluster, we observe an isotropic process with kinetic energy near the one-photon limit, which is due to dissociation of the cluster into molecular subunits followed by secondary dissociation of molecular oxygen. Both O2-pyrrole and O2-pyridine also show a low kinetic energy process that appears to be isotropic in nature. This low kinetic energy process likely results from dissociation of the cluster resulting in significant internal energy in the organic fragment followed by secondary dissociation of O2. Finally, our ion images for O2-pyrrole show O atoms resulting from a two-photon dissociation channel, which has been previously attributed to the formation and subsequent photodissociation of excited O2 (a 1Δg). At similar laser intensities, O2-pyridine does not show significant dissociation through the channel producing O2 (a 1Δg); however, this channel shows a laser intensity dependence for O2-pyridine.
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Affiliation(s)
- Bradley F Parsons
- Department of Chemistry, Creighton University, 2500 California Plaza, Omaha, Nebraska 68178, United States
| | - David E Szpunar
- Department of Chemistry, University of Wisconsin-Stevens Point, 2101 Fourth Avenue, Stevens Point, Wisconsin 54481, United States
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Pyryaeva AP, Ershov KS, Kochubei SA, Baklanov AV. Singlet Oxygen Generation via UV-A, -B, and -C Photoexcitation of Isoprene-Oxygen (C 5H 8-O 2) Encounter Complexes in the Gas Phase. J Phys Chem A 2020; 124:8469-8477. [PMID: 32986424 DOI: 10.1021/acs.jpca.0c07509] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
The formation of singlet oxygen 1O2 provided by the photoexcitation of the encounter complexes of isoprene with oxygen (C5H8-O2) in the gas phase within the spectral region 253.5-355 nm has been observed at the elevated pressure of oxygen. Singlet oxygen has been detected with its NIR luminescence centered near 1.27 μm. The photogeneration of 1O2 is found to be a one-photon process. In the UV-C region (253-278 nm) the quantum yield of 1O2 is measured. This yield of 1O2 is governed mainly by photoexcitation of O2 molecules to the Herzberg III (3Δu) state via enhanced absorption by C5H8-O2 collision complexes. So excited triplet O2 gives rise to singlet oxygen because of triplet-triplet annihilation in the collisions with unexcited O2 molecules. In the UV-B (308 nm) region the appearance of 1O2 is attributed to the excitation of a double spin-flip (DSF) transition in complex C5H8-O2. In the UV-A region (355 nm) besides DSF the O2-assisted T1 ← S0 excitation of isoprene to the triplet state takes place, which is a sensitizer of 1O2 formation. The contribution of the encounter complexes C5H8-O2 to the production of singlet oxygen and to the lifetime of isoprene in the Earth's troposphere are estimated.
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Affiliation(s)
- Alexandra P Pyryaeva
- Voevodsky Institute of Chemical Kinetics and Combustion, Institutskaya Str. 3, Novosibirsk 630090, Russia.,Novosibirsk State University, Pirogova Str. 2, Novosibirsk 630090, Russia
| | - Kirill S Ershov
- Voevodsky Institute of Chemical Kinetics and Combustion, Institutskaya Str. 3, Novosibirsk 630090, Russia.,Novosibirsk State University, Pirogova Str. 2, Novosibirsk 630090, Russia
| | - Sergei A Kochubei
- Institute of Semiconductor Physics, ac. Lavrent'yev ave., 13, Novosibirsk 630090, Russia
| | - Alexey V Baklanov
- Voevodsky Institute of Chemical Kinetics and Combustion, Institutskaya Str. 3, Novosibirsk 630090, Russia.,Novosibirsk State University, Pirogova Str. 2, Novosibirsk 630090, Russia
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Baklanov AV, Parker DH. Weakly Bound Environment of Molecular Oxygen as a Catalyst of Photooxidation. KINETICS AND CATALYSIS 2020. [DOI: 10.1134/s0023158420020019] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Ershov KS, Kochubei SA, Baklanov AV. Tungsten Isotope-Specific UV-Photodecomposition of W(CO) 6 at 266 nm. J Phys Chem A 2019; 123:7751-7757. [PMID: 31414805 DOI: 10.1021/acs.jpca.9b06793] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
UV photodissociation of tungsten hexacarbonyl W(CO)6 has been studied in the molecular beam conditions using time-of-flight mass spectrometry and velocity map imaging. Irradiation of W(CO)6 by pulsed laser radiation at 266 nm results in the appearance of singly and doubly charged tungsten ions. The isotope composition of these ions deviates essentially from natural abundance with deviation being pulse energy-dependent. The velocity map images of the tungsten ions indicate proceeding of several, more than two, parallel channels (sequences of the one-photon processes) of photodissociation, giving rise to tungsten atoms. Isotope effect is assigned to appear in a one-photon bound-bound transition in W(CO) intermediate followed by its predissociation. In the model suggested, the final state of this transition is a vibronic state with excited vibrational mode of W-C stretching vibration. This vibrational excitation is responsible for isotopic shift in the location of the final state. The suggested model fits the observed isotopic composition quantitatively.
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Affiliation(s)
- Kirill S Ershov
- Institute of Chemical Kinetics and Combustion , Institutskaya Str. 3 , Novosibirsk 630090 , Russia.,Novosibirsk State University , Pirogova Str. 2 , Novosibirsk 630090 , Russia
| | - Sergei A Kochubei
- Institute of Semiconductor Physics , ac. Lavrent'yev ave., 13 , Novosibirsk 630090 , Russia
| | - Alexey V Baklanov
- Institute of Chemical Kinetics and Combustion , Institutskaya Str. 3 , Novosibirsk 630090 , Russia.,Novosibirsk State University , Pirogova Str. 2 , Novosibirsk 630090 , Russia
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REMPI detection of singlet oxygen 1O2 arising from UV-photodissociation of van der Waals complex isoprene-oxygen C5H8-O2. Chem Phys Lett 2018. [DOI: 10.1016/j.cplett.2017.12.050] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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11
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Bogomolov AS, Goldort VG, Kochubei SA, Baklanov AV. Photodissociation of van der Waals complexes of iodine X-I 2 (X = I 2, C 2H 4) via charge-transfer state: A velocity map imaging investigation. J Chem Phys 2017; 147:234304. [PMID: 29272931 DOI: 10.1063/1.5001104] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
The photodissociation of van der Waals complexes of iodine X-I2 (X = I2, C2H4) excited via Charge-Transfer (CT) band has been studied with the velocity map imaging technique. Photodissociation of both complexes gives rise to translationally "hot" molecular iodine I2 via channels differing by kinetic energy and angular distribution of the recoil directions. These measured characteristics together with the analysis of the model potential energy surface for these complexes allow us to infer the back-electron-transfer (BET) in the CT state to be a source of observed photodissociation channels and to make conclusions on the location of conical intersections where the BET process takes place. The BET process is concluded to provide an I2 molecule in the electronic ground state with moderate vibrational excitation as well as X molecule in the electronic excited state. In the case of X = I2, the BET process converts anion I2- of the CT state into the neutral I2 in the repulsive excited electronic state which then dissociates promptly giving rise to a pair of I atoms in the fine states 2P1/2. In the case of C2H4-I2, the C2H4 molecules appear in the triplet T1 electronic state. Conical intersection for corresponding BET process becomes energetically accessible after partial twisting of C2H4+ frame in the excited CT state of complex. The C2H4(T)-I2 complex gives rise to triplet ethylene as well as singlet ethylene via the T-S conversion.
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Patros KM, Mann JE, Jarrold CC. O 2-·[Polar VOC] Complexes: H-Bonding versus Charge-Dipole Interactions, and the Noninnocence of Formaldehyde. J Phys Chem A 2017; 121:5459-5467. [PMID: 28671848 DOI: 10.1021/acs.jpca.7b05124] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Anion photoelectron imaging was used to measure the photodetachment spectra of molecular complexes formed between O2- and a range of atmospherically relevant polar molecules, including species with a carbonyl group (acetone, formaldehyde) and alcohols (ethanol, propenol, butenol). Experimental spectra are analyzed using a combination of Franck-Condon simulations and electronic structure calculations. Strong charge-dipole interactions and H-bonding stabilize the complex anions relative to the neutrals, resulting in a ca. 1 eV increase in electron binding energy relative to bare O2-, an effect more pronounced in complexes with H-bonding. In addition, broken degeneracy of the O2-local πg orbitals in the complexes results in the stabilization of the low-lying excited O2 (a 1Δg)·[polar VOC] state relative to the ground O2 (X 3Σg-)·[polar VOC] state when compared to bare O2. The spectra of the O2-·[polar VOC] complexes exhibit less pronounced laser photoelectron angular distribution (PADs). The spectrum of O2-·formaldehyde is unique in terms of both spectral profile and PAD. On the basis of these experimental results in addition to computational results, the complex anion cannot be described as a distinct O2- anion partnered with an innocent solvent molecule; the molecules are more strongly coupled through charge delocalization. Overall, the results underscore how the symmetry of the O2 πg orbitals is broken by different polar partners, which may have implications for atmospheric photochemistry and models of solar radiation absorption that include collision-induced absorption.
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Affiliation(s)
- Kellyn M Patros
- Department of Chemistry, Indiana University , 800 East Kirkwood Avenue, Bloomington, Indiana 47405, United States
| | - Jennifer E Mann
- Physical Electronics , 18725 Lake Drive East, Chanhassen, Minnesota, 55317, United States
| | - Caroline Chick Jarrold
- Department of Chemistry, Indiana University , 800 East Kirkwood Avenue, Bloomington, Indiana 47405, United States
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Shchepin AS, Peshkova TV, Peshkov SA. Induction of radiative forbidden transitions in an oxygen molecule in O2–H2O collision complexes. J STRUCT CHEM+ 2017. [DOI: 10.1134/s0022476617030015] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Patros KM, Mann JE, Jarrold CC. Photoelectron Imaging Spectra of O 2-·VOC and O 4-·VOC Complexes. J Phys Chem A 2016; 120:7828-7838. [PMID: 27648607 DOI: 10.1021/acs.jpca.6b07107] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The anion photoelectron imaging spectra of O2-·VOC and O4-·VOC (VOC = hexane, isoprene, benzene, and benzene-d6) complexes measured using 3.49 eV photon energy, along with the results of ab initio and density functional theory results are reported and analyzed. Photodetachment of these anionic complexes accesses neutrals that model collision complexes, offering a probe of the effects of symmetry-breaking collision events on the electronic structure of normally transparent neutral molecules. The energies of O2-·VOC spectral features compared to the bare O2- indicate that photodetachment of the anion accesses a modestly repulsive region of the O2-VOC potential energy surface, with subtle VOC dependence on the relative energies of the O2 (X 3Σg-)·VOC ground state and O2 (a 1Δg)·VOC excited state. In contrast, a significantly higher intensity of the transition to the O2 (a 1Δg)·VOC excited state relative to the O2 (X 3Σg-)·VOC ground state is observed for VOC = benzene, with a less pronounced effect observed for VOC = isoprene. Similar spectral effects are observed in the O4-·benzene and O4-·isoprene PE spectra. Several explanations are considered, with involvement of a temporary anion state emerging as the most plausible.
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Affiliation(s)
- Kellyn M Patros
- Department of Chemistry, Indiana University , 800 East Kirkwood Avenue, Bloomington, Indiana 47405, United States
| | - Jennifer E Mann
- Physical Electronics , 18725 Lake Drive East, Chanhassen, Minnesota 55317, United States
| | - Caroline Chick Jarrold
- Department of Chemistry, Indiana University , 800 East Kirkwood Avenue, Bloomington, Indiana 47405, United States
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Bogomolov AS, Kochubei SA, Baklanov AV. Oxygen-assisted excitation of methyl iodide as a test of double spin-flip transition in van der Waals complex CH3I-O2. Chem Phys Lett 2016. [DOI: 10.1016/j.cplett.2016.08.059] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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