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Chan YC, Nesbitt DJ. High-resolution infrared spectroscopy of jet cooled cyclobutyl in the α-CH stretch region: large-amplitude puckering dynamics in a 4-membered ring radical. Phys Chem Chem Phys 2024; 26:3081-3091. [PMID: 38180446 DOI: 10.1039/d3cp04812h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2024]
Abstract
Gas-phase cyclobutyl radical (c-C4H7) is generated at a rotational temperature of Trot = 26(1) K in a slit-jet discharge mixture of 70% Ne/30% He and 0.5-0.6% cyclobromobutane (c-C4H7Br). A fully rovibrationally resolved absorption spectrum of the α-CH stretch fundamental band between 3062.9 cm-1 to 3075.7 cm-1 is obtained and analyzed, yielding first precision structural and dynamical information for this novel radical species. The α-CH stretch band origin is determined to be 3068.7887(4) cm-1, which implies only a modest (≈0.8 cm-1) blue shift from rotationally unresolved infrared spectroscopic studies of cyclobutyl radicals in liquid He droplets [A. R. Brown, P. R. Franke and G. E. Douberly, J. Phys. Chem. A, 2017, 121, 7576-7587]. Of particular dynamical interest, a one-dimensional potential energy surface with respect to the ring puckering coordinate is computed at CCSD(T)/ANO2 level of theory and reveals a double minimum Cs puckered geometry, separated by an exceedingly shallow planar C2v transition state barrier (Ebarr ≈ 1 cm-1). Numerical solutions on this double minimum potential yield a zero-point energy for the ground state (Ezero-point ≈ 27 cm-1) greatly in excess of the interconversion barrier. This is indicative of highly delocalized, large amplitude motion of the four-membered ring structure, for which proper vibrationally averaging of the moment of inertia tensor reproduces the experimentally determined inertial defect remarkably well. Finally, intensity alternation in the experimental spectrum due to nuclear spin statistics upon exchange of three indistinguishable H atom pairs (IH = ½) matches Ka + Kc = even : odd = 36 : 28 predictions, implying that the unpaired electron in the radical center lies in an out-of-plane pπ orbital. Thus, high-resolution infrared spectroscopy provides first experimental confirmation of a shallow double minimum ring puckering potential with a highly delocalized ground state wave function peaked at a planar C2v transition state geometry consistent with a cyclobutyl π radical.
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Affiliation(s)
- Ya-Chu Chan
- JILA, University of Colorado Boulder and National Institute of Standards and Technology, Boulder, Colorado 80309, USA.
- Department of Chemistry, University of Colorado Boulder, Boulder, Colorado 80309, USA
| | - David J Nesbitt
- JILA, University of Colorado Boulder and National Institute of Standards and Technology, Boulder, Colorado 80309, USA.
- Department of Chemistry, University of Colorado Boulder, Boulder, Colorado 80309, USA
- Department of Physics, University of Colorado Boulder, Boulder, Colorado 80309, USA
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2
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Caster KL, Lee J, Donnellan Z, Selby TM, Osborn DL, Goulay F. Formation of a Resonance-Stabilized Radical Intermediate by Hydroxyl Radical Addition to Cyclopentadiene. J Phys Chem A 2022; 126:9031-9041. [DOI: 10.1021/acs.jpca.2c06934] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
Affiliation(s)
- Kacee L. Caster
- C. Eugene Bennett Department of Chemistry, West Virginia University, Morgantown, West Virginia26506, United States
| | - James Lee
- C. Eugene Bennett Department of Chemistry, West Virginia University, Morgantown, West Virginia26506, United States
| | - Zachery Donnellan
- C. Eugene Bennett Department of Chemistry, West Virginia University, Morgantown, West Virginia26506, United States
| | - Talitha M. Selby
- Department of Mathematics and Natural Sciences, University of Wisconsin-Milwaukee, West Bend, Wisconsin53095, United States
| | - David L. Osborn
- Combustion Research Facility, Sandia National Laboratories, Mail Stop 9055, Livermore, California94551, United States
- Department of Chemical Engineering, University of California, Davis, Davis, California95616, United States
| | - Fabien Goulay
- C. Eugene Bennett Department of Chemistry, West Virginia University, Morgantown, West Virginia26506, United States
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3
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Zhu F, Pan J, Zou Q, Wu M, Wang H, Xu G. Electron beam irradiation of typical sulfonamide antibiotics in the aquatic environment: Kinetics, removal mechanisms, degradation products and toxicity assessment. CHEMOSPHERE 2021; 274:129713. [PMID: 33545585 DOI: 10.1016/j.chemosphere.2021.129713] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/28/2020] [Revised: 01/14/2021] [Accepted: 01/17/2021] [Indexed: 06/12/2023]
Abstract
Due to their widespread use and harmful effects on aquatic environment, sulfonamide antibiotics (SAs) have become an emerging pollutant of great concern around the world. In this study, we investigated the degradation process and mechanism of sulfamerazine (SMR), sulfadiazine (SDZ), and sulfapyridine (SPD) by electron-beam irradiation (EBI). The results showed that the three SAs were well suited to the pseudo-first-order reaction kinetics, and they could be almost completely removed with high efficiency (5 kGy). Among the environmental factors, pH (3.0) and O2 atmosphere can further enhance the removal of the sulfonamides (SAs), while NO2- has the most pronounced degrading inhibitory effects among the many ions, these results illustrate that hydroxyl radicals play a dominant role. Compared with SMR and SDZ, the degree of mineralization of lower molecular weight SPD is obvious (45%). LC-MS and DFT calculations indicate that the concentrations of degradation products of the three SAs show a tendency to increase and then decrease, demonstrating that EBI can achieve efficient removal and further mineralization of SAs. Meanwhile, the results of the common product 4-Aminophenol produced during the degradation process further indicate that HO is the predominant reactive oxygen species (ROS). In addition, acute toxicity experiments with luminescent bacteria and predictions of ECOSAR procedures proved the toxic effects greatly decreased after the degradation. This study provides new ideas for achieving efficient and profound removal of emerging pollutants from the aquatic environment.
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Affiliation(s)
- Feng Zhu
- School of Environmental and Chemical Engineering, Shanghai University, 99 Shangda Road, Shanghai, 200444, China; Key Laboratory of Organic Compound Pollution Control Engineering, Ministry of Education, Shanghai, 200444, PR China.
| | - Jiali Pan
- School of Environmental and Chemical Engineering, Shanghai University, 99 Shangda Road, Shanghai, 200444, China.
| | - Qi Zou
- School of Environmental and Chemical Engineering, Shanghai University, 99 Shangda Road, Shanghai, 200444, China.
| | - Minghong Wu
- School of Environmental and Chemical Engineering, Shanghai University, 99 Shangda Road, Shanghai, 200444, China; Key Laboratory of Organic Compound Pollution Control Engineering, Ministry of Education, Shanghai, 200444, PR China.
| | - Hongyong Wang
- Key Laboratory of Organic Compound Pollution Control Engineering, Ministry of Education, Shanghai, 200444, PR China; Shanghai Institute of Applied Radiation, Shanghai University, 20 Chengzhong Road, Shanghai, 200444, China.
| | - Gang Xu
- School of Environmental and Chemical Engineering, Shanghai University, 99 Shangda Road, Shanghai, 200444, China; Key Laboratory of Organic Compound Pollution Control Engineering, Ministry of Education, Shanghai, 200444, PR China.
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Keshavarz F. Chemical Kinetics Approves the Occurrence of C ( 3P j) Reaction with H 2O. J Phys Chem A 2019; 123:5877-5892. [PMID: 31268710 DOI: 10.1021/acs.jpca.9b03492] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Although both atomic carbon and water are omnipresent in human life, there is a debate about the possibility of carbon reaction with water. Some low-temperature spectroscopic investigations have rejected the reaction, whereas some room-temperature experiments and theoretical studies have accepted the possibility of the reaction by reporting rate coefficients ranging from 105 to 109 L mol-1 s-1. This study provides new lines of evidence about the reaction through exploration of the reaction mechanism using the CCSD(T) method and solving the corresponding master equation by following two main approaches. According to the results, the rate coefficient of the reaction is significantly influenced by the tunneling and hindered rotation effects, in addition to the selected total angular momentum (J). Furthermore, the total rate coefficient of the reaction increases dramatically (from 107 to 1011 L mol-1 s-1) with the rise of temperature from 100 to 4000 K, while the total rate coefficient is insensitive to pressure (0.1-10 atm). Despite some differences between the results of the two approaches, the rate coefficients of both methods are consistent with the previously reported rate coefficients. Also, in agreement with the previous studies, the major products are 2HOC + 2H and 2HCO + 2H. In general, the findings approve the occurrence of the title reaction and indicate that the mentioned conflict is due to the sensitivity of the reaction to the investigated temperature and J level. The sensitivity does not permit low-temperature spectroscopic studies to detect any products and varies the measured and calculated rate coefficients.
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Affiliation(s)
- Fatemeh Keshavarz
- Department of Chemistry, College of Science , Shiraz University , Shiraz 71946-84795 , Iran
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Dutta S, Mallick RK, Prasad R, Gandon V, Sahoo AK. Alkyne Versus Ynamide Reactivity: Regioselective Radical Cyclization of Yne‐Ynamides. Angew Chem Int Ed Engl 2019; 58:2289-2294. [DOI: 10.1002/anie.201811947] [Citation(s) in RCA: 57] [Impact Index Per Article: 11.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/17/2018] [Revised: 12/12/2018] [Indexed: 12/12/2022]
Affiliation(s)
- Shubham Dutta
- School of ChemistryUniversity of Hyderabad Hyderabad India
| | | | - Rangu Prasad
- School of ChemistryUniversity of Hyderabad Hyderabad India
| | - Vincent Gandon
- Institut de Chimie Moléculaire et des Matériaux d'Orsay, CNRS UMR 8182Université Paris-Sud, Université Paris-Saclay Bâtiment 420 91405 Orsay cedex France
- Laboratoire de Chimie Moléculaire (LCM), CNRS UMR 9168Ecole PolytechniqueUniversité Paris-Saclay route de Saclay 91128 Palaiseau cedex France
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Dutta S, Mallick RK, Prasad R, Gandon V, Sahoo AK. Alkyne Versus Ynamide Reactivity: Regioselective Radical Cyclization of Yne-Ynamides. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201811947] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Affiliation(s)
- Shubham Dutta
- School of Chemistry; University of Hyderabad; Hyderabad India
| | | | - Rangu Prasad
- School of Chemistry; University of Hyderabad; Hyderabad India
| | - Vincent Gandon
- Institut de Chimie Moléculaire et des Matériaux d'Orsay, CNRS UMR 8182; Université Paris-Sud, Université Paris-Saclay; Bâtiment 420 91405 Orsay cedex France
- Laboratoire de Chimie Moléculaire (LCM), CNRS UMR 9168; Ecole Polytechnique; Université Paris-Saclay; route de Saclay 91128 Palaiseau cedex France
| | - Akhila K. Sahoo
- School of Chemistry; University of Hyderabad; Hyderabad India
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Cavallotti C, Pelucchi M, Georgievskii Y, Klippenstein SJ. EStokTP: Electronic Structure to Temperature- and Pressure-Dependent Rate Constants—A Code for Automatically Predicting the Thermal Kinetics of Reactions. J Chem Theory Comput 2018; 15:1122-1145. [DOI: 10.1021/acs.jctc.8b00701] [Citation(s) in RCA: 57] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- C. Cavallotti
- Department of Chemistry, Materials and Chemical Engineering “G. Natta”, Politecnico di Milano, Milan, Italy
| | - M. Pelucchi
- Department of Chemistry, Materials and Chemical Engineering “G. Natta”, Politecnico di Milano, Milan, Italy
| | - Y. Georgievskii
- Chemical Sciences and Engineering Division, Argonne National Laboratory, Argonne, Illinois 60439, United States
| | - S. J. Klippenstein
- Chemical Sciences and Engineering Division, Argonne National Laboratory, Argonne, Illinois 60439, United States
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Le XT, Mai TVT, Lin KC, Huynh LK. Low Temperature Oxidation Kinetics of Biodiesel Molecules: Rate Rules for Concerted HO2 Elimination from Alkyl Ester Peroxy Radicals. J Phys Chem A 2018; 122:8259-8273. [DOI: 10.1021/acs.jpca.8b05070] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Xuan T. Le
- Institute for Computational Science and Technology at Ho Chi Minh City, Ho Chi Minh City, Vietnam
- University of Science, Vietnam National University—HCMC, Ho Chi Minh City, Vietnam
| | - Tam V.-T. Mai
- Institute for Computational Science and Technology at Ho Chi Minh City, Ho Chi Minh City, Vietnam
- University of Science, Vietnam National University—HCMC, Ho Chi Minh City, Vietnam
| | - Kuang C. Lin
- Department of Engineering and System Science, National Tsing Hua University, Hsinchu, 30013, Taiwan
| | - Lam K. Huynh
- International University, Vietnam National University—HCMC, Ho Chi Minh City, Vietnam
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Bao JL, Zhang X, Truhlar DG. Predicting pressure-dependent unimolecular rate constants using variational transition state theory with multidimensional tunneling combined with system-specific quantum RRK theory: a definitive test for fluoroform dissociation. Phys Chem Chem Phys 2018; 18:16659-70. [PMID: 27273734 DOI: 10.1039/c6cp02765b] [Citation(s) in RCA: 27] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Abstract
Understanding the falloff in rate constants of gas-phase unimolecular reaction rate constants as the pressure is lowered is a fundamental problem in chemical kinetics, with practical importance for combustion, atmospheric chemistry, and essentially all gas-phase reaction mechanisms. In the present work, we use our recently developed system-specific quantum RRK theory, calibrated by canonical variational transition state theory with small-curvature tunneling, combined with the Lindemann-Hinshelwood mechanism, to model the dissociation reaction of fluoroform (CHF3), which provides a definitive test for falloff modeling. Our predicted pressure-dependent thermal rate constants are in excellent agreement with experimental values over a wide range of pressures and temperatures. The present validation of our methodology, which is able to include variational transition state effects, multidimensional tunneling based on the directly calculated potential energy surface along the tunneling path, and torsional and other vibrational anharmonicity, together with state-of-the-art reaction-path-based direct dynamics calculations, is important because the method is less empirical than models routinely used for generating full mechanisms, while also being simpler in key respects than full master equation treatments and the full reduced falloff curve and modified strong collision methods of Troe.
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Affiliation(s)
- Junwei Lucas Bao
- Department of Chemistry, Chemical Theory Center, and Supercomputing Institute, University of Minnesota, Minneapolis, Minnesota 55455-0431, USA.
| | - Xin Zhang
- State Key Laboratory of Chemical Resource Engineering, Institute of Materia Medica, College of Science, Beijing University of Chemical Technology, Beijing, 100029, P. R. China. and Department of Chemistry, Chemical Theory Center, and Supercomputing Institute, University of Minnesota, Minneapolis, Minnesota 55455-0431, USA.
| | - Donald G Truhlar
- Department of Chemistry, Chemical Theory Center, and Supercomputing Institute, University of Minnesota, Minneapolis, Minnesota 55455-0431, USA.
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Zhang H, Zhang X, Truhlar DG, Xu X. Nonmonotonic Temperature Dependence of the Pressure-Dependent Reaction Rate Constant and Kinetic Isotope Effect of Hydrogen Radical Reaction with Benzene Calculated by Variational Transition-State Theory. J Phys Chem A 2017; 121:9033-9044. [PMID: 29095614 DOI: 10.1021/acs.jpca.7b09374] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
The reaction between H and benzene is a prototype for reactions of radicals with aromatic hydrocarbons. Here we report calculations of the reaction rate constants and the branching ratios of the two channels of the reaction (H addition and H abstraction) over a wide temperature and pressure range. Our calculations, obtained with an accurate potential energy surface, are based on variational transition-state theory for the high-pressure limit of the addition reaction and for the abstraction reaction and on system-specific quantum Rice-Ramsperger-Kassel theory calibrated by variational transition-state theory for pressure effects on the addition reaction. The latter is a very convenient way to include variational effects, corner-cutting tunneling, and anharmonicity in falloff calculations. Our results are in very good agreement with the limited experimental data and show the importance of including pressure effects in the temperature interval where the mechanism changes from addition to abstraction. We found a negative temperature effect of the total reaction rate constants at 1 atm pressure in the temperature region where experimental data are missing and accurate theoretical data were previously missing as well. We also calculated the H + C6H6/C6D6 and D + C6H6/C6D6 kinetic isotope effects, and we compared our H + C6H6 results to previous theoretical data for H + toluene. We report a very novel nonmonotonic dependence of the kinetic isotope effect on temperature. A particularly striking effect is the prediction of a negative temperature dependence of the total rate constant over 300-500 K wide temperature ranges, depending on the pressure but generally in the range from 600 to 1700 K, which includes the temperature range of ignition in gasoline engines, which is important because aromatics are important components of common fuels.
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Affiliation(s)
- Hui Zhang
- State Key Laboratory of Chemical Resource Engineering, Institute of Materia Medica, College of Science, Beijing University of Chemical Technology , Beijing 100029, P. R. China.,Center for Combustion Energy and Department of Thermal Engineering, Tsinghua University , Beijing 100084, P. R. China
| | - Xin Zhang
- State Key Laboratory of Chemical Resource Engineering, Institute of Materia Medica, College of Science, Beijing University of Chemical Technology , Beijing 100029, P. R. China
| | - Donald G Truhlar
- Department of Chemistry, Chemical Theory Center, and Minnesota Supercomputing Institute, University of Minnesota , Minneapolis, Minnesota 55455-0431, United States
| | - Xuefei Xu
- Center for Combustion Energy and Department of Thermal Engineering, Tsinghua University , Beijing 100084, P. R. China
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11
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Theoretical studies of unimolecular thermal decomposition reactions of n -hexane and n -hexene isomers. COMPUT THEOR CHEM 2017. [DOI: 10.1016/j.comptc.2017.05.034] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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