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Kalhor HR, Piraman Z, Fathali Y. Hen egg white lysozyme encapsulated in ZIF-8 for performing promiscuous enzymatic Mannich reaction. iScience 2023; 26:107807. [PMID: 37744039 PMCID: PMC10514465 DOI: 10.1016/j.isci.2023.107807] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Academic Contribution Register] [Received: 05/15/2023] [Revised: 06/05/2023] [Accepted: 08/30/2023] [Indexed: 09/26/2023] Open
Abstract
Hen egg white lysozyme (HEWL) was exploited for the synthesis of β-amino carbonyl compounds through a direct and three-component Mannich reaction in aqueous, confirming high chemoselectivity toward imine. In order to further extend the applications of the enzyme, HEWL was encapsulated using a metal-organic framework (MOF). The reactivity, stereoselectivity, and reusability of the encapsulated enzyme were investigated. The reaction was significantly enhanced as compared to the non-encapsulated enzyme. A mutated version of the enzyme, containing Asp52Ala (D52A), lacking important catalytical residue, has lost the bacterial site activity against Micrococcus luteus (M. luteus) while the D52A variant displayed an increased rate of the Mannich reaction, indicating a different catalytical residue involved in the promiscuous reaction. Based on site-directed mutagenesis, molecular docking, and molecular dynamic studies, it was proposed that π-stacking, H-bond interactions, and the presence of water in the active site may play crucial roles in the mechanism of the reaction.
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Affiliation(s)
- Hamid R. Kalhor
- Biochemistry and Chemical Biology Research Laboratory, Department of Chemistry, Sharif University of Technology, Tehran, Iran
| | - Zeinab Piraman
- Biochemistry and Chemical Biology Research Laboratory, Department of Chemistry, Sharif University of Technology, Tehran, Iran
| | - Yasaman Fathali
- Biochemistry and Chemical Biology Research Laboratory, Department of Chemistry, Sharif University of Technology, Tehran, Iran
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2
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Metwally NH, Koraa TH, Sanad SMH. Green one-pot synthesis and in vitro antibacterial screening of pyrano[2,3- c]pyrazoles, 4 H-chromenes and pyrazolo[1,5- a]pyrimidines using biocatalyzed pepsin. SYNTHETIC COMMUN 2022. [DOI: 10.1080/00397911.2022.2074301] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Academic Contribution Register] [Indexed: 12/14/2022]
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Benaglia M, Greco SJ, Westphal R, Venturini Filho E, Medici F. Stereoselective Domino Reactions in the Synthesis of Spiro Compounds. SYNTHESIS-STUTTGART 2022. [DOI: 10.1055/a-1771-0641] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Academic Contribution Register] [Indexed: 12/24/2022]
Abstract
AbstractThis review summarizes the latest developments in asymmetric domino reactions, with the emphasis on the preparation of spiro compounds. Discussions on the stereoselectivity of the transformations, the reaction mechanisms, the rationalization of the stereochemical outcome, and the applications of domino reactions to the synthesis of biologically active molecules and natural products are included when appropriate.1 Introduction2 Asymmetric Domino Reactions2.1 Domino Reactions Initiated by Michael Reactions2.2 Domino Reactions Initiated by Mannich Reactions2.3 Domino Reactions Initiated by Knoevenagel Reactions2.4 Domino Reactions Initiated by Cycloaddition Reactions2.5 Domino Reactions Initiated by Metal Insertion2.6 Other Mechanisms3 Conclusion
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Metwally NH, Elgemeie GH, Jones PG. Crystal structure of 2-(2,5-di-meth-oxy-phen-yl)benzo[ d]thia-zole. Acta Crystallogr E Crystallogr Commun 2022; 78:445-448. [PMID: 35492282 PMCID: PMC8983990 DOI: 10.1107/s2056989022003279] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Academic Contribution Register] [Received: 03/18/2022] [Accepted: 03/23/2022] [Indexed: 12/02/2022]
Abstract
The title compound, C15H13NO2S, was synthesized efficiently in the solid state by exploiting pepsin catalysis. The ring systems are nearly coplanar [inter-planar angle of 5.38 (2)°] with an associated intra-molecular S⋯O=C short contact of 2.7082 (4) Å. The packing involves C-H⋯O, C-H⋯π and π-π contacts.
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Affiliation(s)
- Nadia H. Metwally
- Chemistry Department, Faculty of Science, Cairo University, Giza, Egypt
| | - Galal H. Elgemeie
- Chemistry Department, Faculty of Science, Helwan University, Cairo, Egypt
| | - Peter G. Jones
- Institut für Anorganische und Analytische Chemie, Technische Universität Braunschweig, Hagenring 30, D-38106 Braunschweig, Germany
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Long CJ, He YH, Guan Z. Asymmetric oxidative Mannich reactions promoted by photocatalysis and electrochemistry. Org Biomol Chem 2022; 20:2544-2561. [PMID: 35266948 DOI: 10.1039/d2ob00054g] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Academic Contribution Register] [Indexed: 01/03/2023]
Abstract
The asymmetric Mannich reaction is an essential method in contemporary organic chemistry. As a representative of clean and green synthesis methods, photochemical and electrochemical oxidation strategies have re-emerged in recent years, providing new ideas for asymmetric Mannich reactions. Numerous chiral β-amino carbonyl compounds have been accessed in satisfactory yields with excellent enantioselectivity via such novel asymmetric oxidative Mannich reactions. This minireview highlights plentiful advances in asymmetric oxidative Mannich reactions that rely on photoredox or anodic-oxidation and covers the literature from 2014 to date. Furthermore, the future development of this field is envisaged.
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Affiliation(s)
- Chao-Jiu Long
- Key Laboratory of Applied Chemistry of Chongqing Municipality, School of Chemistry and Chemical Engineering, Southwest University, Chongqing 400715, China.
| | - Yan-Hong He
- Key Laboratory of Applied Chemistry of Chongqing Municipality, School of Chemistry and Chemical Engineering, Southwest University, Chongqing 400715, China.
| | - Zhi Guan
- Key Laboratory of Applied Chemistry of Chongqing Municipality, School of Chemistry and Chemical Engineering, Southwest University, Chongqing 400715, China.
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Usachev SA, Nigamatova DI, Mysik DK, Naumov NA, Obydennov DL, Sosnovskikh VY. 2-Aryl-6-Polyfluoroalkyl-4-Pyrones as Promising R F-Building-Blocks: Synthesis and Application for Construction of Fluorinated Azaheterocycles. Molecules 2021; 26:4415. [PMID: 34361567 PMCID: PMC8347980 DOI: 10.3390/molecules26154415] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Academic Contribution Register] [Received: 06/28/2021] [Revised: 07/17/2021] [Accepted: 07/19/2021] [Indexed: 11/18/2022] Open
Abstract
A convenient and general method for the direct synthesis of 2-aryl-6-(trifluoromethyl)-4-pyrones and 2-aryl-5-bromo-6-(trifluoromethyl)-4-pyrones has been developed on the basis of one-pot oxidative cyclization of (E)-6-aryl-1,1,1-trifluorohex-5-ene-2,4-diones via a bromination/dehydrobromination approach. This strategy was also applied for the preparation of 2-phenyl-6-polyfluoroalkyl-4-pyrones and their 5-bromo derivatives. Conditions of chemoselective enediones bromination were found and the key intermediates of the cyclization of bromo-derivatives to 4-pyrones were characterized. Synthetic application of the prepared 4-pyrones has been demonstrated for the construction of biologically important CF3-bearing azaheterocycles, such as pyrazoles, pyridones, and triazoles.
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Affiliation(s)
| | | | | | | | | | - Vyacheslav Y. Sosnovskikh
- Institute of Natural Sciences and Mathematics, Ural Federal University, 51 Lenina Ave., 620000 Ekaterinburg, Russia; (S.A.U.); (D.I.N.); (D.K.M.); (N.A.N.); (D.L.O.)
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7
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Shukla RD, Rai B, Kumar A. Exploration of Catalytic Activity of Trypsin for C(sp3
)-H Functionalization and Consequent C-C Bond Formation. European J Org Chem 2019. [DOI: 10.1002/ejoc.201900290] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Academic Contribution Register] [Indexed: 12/22/2022]
Affiliation(s)
- Ratnakar Dutt Shukla
- Medicinal and Process Chemistry Division; CSIR-Central Drug Research Institute (CDRI); 226031 Lucknow India
- Academy of Scientific & Innovative Research (AcSIR); New Delhi India
| | - Byanju Rai
- Medicinal and Process Chemistry Division; CSIR-Central Drug Research Institute (CDRI); 226031 Lucknow India
| | - Atul Kumar
- Medicinal and Process Chemistry Division; CSIR-Central Drug Research Institute (CDRI); 226031 Lucknow India
- Academy of Scientific & Innovative Research (AcSIR); New Delhi India
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8
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Chen YJ, Xiang Y, He YH, Guan Z. Anti-selective direct asymmetric Mannich reaction catalyzed by protease. Tetrahedron Lett 2019. [DOI: 10.1016/j.tetlet.2019.03.031] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Academic Contribution Register] [Indexed: 11/24/2022]
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He WX, Xing X, Yang ZJ, Yu Y, Wang N, Yu XQ. Biocatalytic One-Pot Three-Component Synthesis of Indoloquinolizines with High Diastereoselectivity. Catal Letters 2019. [DOI: 10.1007/s10562-019-02660-7] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Academic Contribution Register] [Indexed: 11/30/2022]
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Li Y, Chang Y, Li Y, Cao C, Yang J, Wang B, Liang D. Iron-Catalyzed exo
-Selective Synthesis of Cyanoalkyl Indolines via Cyanoisopropylarylation of Unactivated Alkenes. Adv Synth Catal 2018. [DOI: 10.1002/adsc.201800296] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Academic Contribution Register] [Indexed: 12/27/2022]
Affiliation(s)
- Yanni Li
- Department of Chemistry; Kunming University; Kunming 650214 People's Republic of China
| | - Yu Chang
- Department of Chemistry; Kunming University; Kunming 650214 People's Republic of China
| | - Yufen Li
- Department of Chemistry; Kunming University; Kunming 650214 People's Republic of China
| | - Cheng Cao
- Department of Chemistry; Kunming University; Kunming 650214 People's Republic of China
| | - Jinshuang Yang
- Department of Chemistry; Kunming University; Kunming 650214 People's Republic of China
| | - Baoling Wang
- Yunnan Engineering Technology Research Center for Plastic Films; Kunming 650214 People's Republic of China
| | - Deqiang Liang
- Department of Chemistry; Kunming University; Kunming 650214 People's Republic of China
- Yunnan Engineering Technology Research Center for Plastic Films; Kunming 650214 People's Republic of China
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Mohammadi Ziarani G, Moradi R, Lashgari N. Asymmetric synthesis of chiral oxindoles using isatin as starting material. Tetrahedron 2018. [DOI: 10.1016/j.tet.2018.01.025] [Citation(s) in RCA: 42] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Academic Contribution Register] [Indexed: 11/27/2022]
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12
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Ganesh M, Rao MP, Mirajakar SJ. Part I: Diastereoselective Reactions Involving β-Mono- and β,β′-Disubstituted Alkylidene Oxindoles: Pondering Alkene Geometry. ASIAN J ORG CHEM 2017. [DOI: 10.1002/ajoc.201700410] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Academic Contribution Register] [Indexed: 12/27/2022]
Affiliation(s)
- Madhu Ganesh
- Department of Chemistry, P.O. Box 1908, B.M.S.; College of Engineering; Bull Temple Road Bengaluru 560019 India
| | - Madhuri P. Rao
- Department of Chemistry, P.O. Box 1908, B.M.S.; College of Engineering; Bull Temple Road Bengaluru 560019 India
| | - Shruti J. Mirajakar
- Department of Chemistry, P.O. Box 1908, B.M.S.; College of Engineering; Bull Temple Road Bengaluru 560019 India
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15
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Zhang GY, Xiang Y, Guan Z, He YH. Enzyme and photoredox sequential catalysis for the synthesis of 1,3-oxazine derivatives in one pot. Catal Sci Technol 2017. [DOI: 10.1039/c6cy02682f] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Academic Contribution Register] [Indexed: 11/21/2022]
Abstract
A novel strategy combining visible-light and enzyme catalysis for the synthesis of 1,3-oxazine derivatives is described for the first time.
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Affiliation(s)
- Guo-Yan Zhang
- Key Laboratory of Applied Chemistry of Chongqing Municipality
- School of Chemistry and Chemical Engineering
- Southwest University
- Chongqing 400715
- PR China
| | - Yang Xiang
- Key Laboratory of Applied Chemistry of Chongqing Municipality
- School of Chemistry and Chemical Engineering
- Southwest University
- Chongqing 400715
- PR China
| | - Zhi Guan
- Key Laboratory of Applied Chemistry of Chongqing Municipality
- School of Chemistry and Chemical Engineering
- Southwest University
- Chongqing 400715
- PR China
| | - Yan-Hong He
- Key Laboratory of Applied Chemistry of Chongqing Municipality
- School of Chemistry and Chemical Engineering
- Southwest University
- Chongqing 400715
- PR China
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Guo JT, Xiang Y, Guan Z, He YH. Papain-catalyzed aldol reaction for the synthesis of trifluoromethyl carbinol derivatives. ACTA ACUST UNITED AC 2016. [DOI: 10.1016/j.molcatb.2016.05.014] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Academic Contribution Register] [Indexed: 11/16/2022]
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18
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Xiang Y, Song J, Zhang Y, Yang DC, Guan Z, He YH. Enzyme-Catalyzed Asymmetric Domino Thia-Michael/Aldol Condensation Using Pepsin. J Org Chem 2016; 81:6042-8. [DOI: 10.1021/acs.joc.6b01132] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Academic Contribution Register] [Indexed: 12/27/2022]
Affiliation(s)
- Yang Xiang
- Key Laboratory of Applied
Chemistry of Chongqing Municipality, School of Chemistry and Chemical
Engineering, Southwest University, Chongqing 400715, P. R. China
| | - Jian Song
- Key Laboratory of Applied
Chemistry of Chongqing Municipality, School of Chemistry and Chemical
Engineering, Southwest University, Chongqing 400715, P. R. China
| | - Yong Zhang
- Key Laboratory of Applied
Chemistry of Chongqing Municipality, School of Chemistry and Chemical
Engineering, Southwest University, Chongqing 400715, P. R. China
| | - Da-Cheng Yang
- Key Laboratory of Applied
Chemistry of Chongqing Municipality, School of Chemistry and Chemical
Engineering, Southwest University, Chongqing 400715, P. R. China
| | - Zhi Guan
- Key Laboratory of Applied
Chemistry of Chongqing Municipality, School of Chemistry and Chemical
Engineering, Southwest University, Chongqing 400715, P. R. China
| | - Yan-Hong He
- Key Laboratory of Applied
Chemistry of Chongqing Municipality, School of Chemistry and Chemical
Engineering, Southwest University, Chongqing 400715, P. R. China
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