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Yang G, Wijma HJ, Rozeboom HJ, Mascotti ML, Fraaije MW. Identification and characterization of archaeal and bacterial F 420 -dependent thioredoxin reductases. FEBS J 2023; 290:4777-4791. [PMID: 37403630 DOI: 10.1111/febs.16896] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2023] [Revised: 06/19/2023] [Accepted: 07/04/2023] [Indexed: 07/06/2023]
Abstract
The thioredoxin pathway is an antioxidant system present in most organisms. Electrons flow from a thioredoxin reductase to thioredoxin at the expense of a specific electron donor. Most known thioredoxin reductases rely on NADPH as a reducing cofactor. Yet, in 2016, a new type of thioredoxin reductase was discovered in Archaea which utilize instead a reduced deazaflavin cofactor (F420 H2 ). For this reason, the respective enzyme was named deazaflavin-dependent flavin-containing thioredoxin reductase (DFTR). To have a broader understanding of the biochemistry of DFTRs, we identified and characterized two other archaeal representatives. A detailed kinetic study, which included pre-steady state kinetic analyses, revealed that these two DFTRs are highly specific for F420 H2 while displaying marginal activity with NADPH. Nevertheless, they share mechanistic features with the canonical thioredoxin reductases that are dependent on NADPH (NTRs). A detailed structural analysis led to the identification of two key residues that tune cofactor specificity of DFTRs. This allowed us to propose a DFTR-specific sequence motif that enabled for the first time the identification and experimental characterization of a bacterial DFTR.
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Affiliation(s)
- Guang Yang
- Molecular Enzymology Group, University of Groningen, The Netherlands
| | - Hein J Wijma
- Molecular Enzymology Group, University of Groningen, The Netherlands
| | | | - Maria Laura Mascotti
- Molecular Enzymology Group, University of Groningen, The Netherlands
- IMIBIO-SL CONICET, Facultad de Química Bioquímica y Farmacia, Universidad Nacional de San Luis, Argentina
| | - Marco W Fraaije
- Molecular Enzymology Group, University of Groningen, The Netherlands
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2
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Thermodynamic and Kinetic Studies of the Activities of Aldehydic C−H Bonds toward Their H‐Atom Transfer Reactions. ChemistrySelect 2023. [DOI: 10.1002/slct.202204789] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/06/2023]
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3
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Fu Y, Yang L, Zhou Z, Jia T, Shen G, Zhu X. Comparison of Thermodynamic Energies for Elementary Steps of Anionic Hydrides to Release Hydride Ions in Acetonitrile. ChemistrySelect 2022. [DOI: 10.1002/slct.202203626] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Affiliation(s)
- Yan‐Hua Fu
- College of Chemistry and Environmental Engineering Anyang Institute of Technology Anyang Henan 455000 China
| | - Li‐Guo Yang
- College of Chemistry and Environmental Engineering Anyang Institute of Technology Anyang Henan 455000 China
| | - Zhong‐Yuan Zhou
- College of Chemistry and Environmental Engineering Anyang Institute of Technology Anyang Henan 455000 China
| | - Taixuan Jia
- College of Chemistry and Environmental Engineering Anyang Institute of Technology Anyang Henan 455000 China
| | - Guang‐Bin Shen
- School of Medical Engineering Jining Medical University Jining Shandong 272000 P. R. China
| | - Xiao‐Qing Zhu
- Department of Chemistry Nankai University Tianjin 300071 China
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4
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Comparison between 1,2-Dihydropyridine and 1,4-Dihydropyridine on Hydride-Donating Ability and Activity. Molecules 2022; 27:molecules27175382. [PMID: 36080150 PMCID: PMC9457676 DOI: 10.3390/molecules27175382] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2022] [Revised: 08/16/2022] [Accepted: 08/19/2022] [Indexed: 11/17/2022] Open
Abstract
In this paper, detailed comparisons of the driving force in thermodynamics and intrinsic force in the kinetics of 1,2-dihydropyridine and 1,4-dihydropyridine isomers of PNAH, HEH, and PYH in hydride transfer reactions are made. For 1,2-PNAH and 1,4-PNAH, the values of the thermodynamic driving forces, kinetic intrinsic barriers, and thermo-kinetic parameters are 60.50 and 61.90 kcal/mol, 27.92 and 26.34 kcal/mol, and 44.21 and 44.12 kcal/mol, respectively. For 1,2-HEH and 1,4-HEH, the values of the thermodynamic driving forces, kinetic intrinsic barriers, and thermo-kinetic parameters are 63.40 and 65.00 kcal/mol, 31.68 and 34.96 kcal/mol, and 47.54 and 49.98 kcal/mol, respectively. For 1,2-PYH and 1,4-PYH, the order of thermodynamic driving forces, kinetic intrinsic barriers, and thermo-kinetic parameters are 69.90 and 72.60 kcal/mol, 33.06 and 25.74 kcal/mol, and 51.48 and 49.17 kcal/mol, respectively. It is not difficult to find that thermodynamically favorable structures are not necessarily kinetically favorable. In addition, according to the analysis of thermo-kinetic parameters, 1,4-PNAH, 1,2-HEH, and 1,4-PYH have a strong hydride-donating ability in actual chemical reactions.
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5
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Fu YH, Wang Z, Wang K, Shen GB, Zhu XQ. Evaluation and comparison of antioxidant abilities of five bioactive molecules with C–H and O–H bonds in thermodynamics and kinetics. RSC Adv 2022; 12:27389-27395. [PMID: 36275999 PMCID: PMC9513755 DOI: 10.1039/d2ra04839f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2022] [Accepted: 09/10/2022] [Indexed: 11/21/2022] Open
Abstract
In this work, the antioxidant abilities of NADH coenzyme analogue BNAH, F420 reduction prototype analogue F420H, vitamin C analogue iAscH−, caffeic acid, and (+)-catechin in acetonitrile in chemical reactions were studied and discussed.
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Affiliation(s)
- Yan-Hua Fu
- College of Chemistry and Environmental Engineering, Anyang Institute of Technology, Anyang, Henan, 455000, China
| | - Zhen Wang
- College of Chemistry and Environmental Engineering, Anyang Institute of Technology, Anyang, Henan, 455000, China
| | - Kai Wang
- College of Chemistry and Environmental Engineering, Anyang Institute of Technology, Anyang, Henan, 455000, China
| | - Guang-Bin Shen
- School of Medical Engineering, Jining Medical University, Jining, Shandong, 272000, P. R. China
| | - Xiao-Qing Zhu
- Department of Chemistry, Nankai University, Tianjin, 300071, China
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6
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Shen GB, Qian BC, Fu YH, Zhu XQ. Thermodynamics of the elementary steps of organic hydride chemistry determined in acetonitrile and their applications. Org Chem Front 2022. [DOI: 10.1039/d2qo01310j] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
This review focuses on the thermodynamics of the elementary step of 421 organic hydrides and unsaturated compounds releasing or accepting hydride or hydrogen determined in acetonitrile as well as their potential applications.
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Affiliation(s)
- Guang-Bin Shen
- School of Medical Engineering, Jining Medical University, Jining, Shandong, 272000, P. R. China
| | - Bao-Chen Qian
- School of Medical Engineering, Jining Medical University, Jining, Shandong, 272000, P. R. China
| | - Yan-Hua Fu
- College of Chemistry and Environmental Engineering, Anyang Institute of Technology, Anyang, Henan, 455000, China
| | - Xiao-Qing Zhu
- The State Key Laboratory of Elemento-Organic Chemistry, Department of Chemistry, Nankai University, Collaborative Innovation Center of Chemical Science and Engineering (Tianjin), Tianjin 300071, China
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7
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Grinter R, Greening C. Cofactor F420: an expanded view of its distribution, biosynthesis and roles in bacteria and archaea. FEMS Microbiol Rev 2021; 45:fuab021. [PMID: 33851978 PMCID: PMC8498797 DOI: 10.1093/femsre/fuab021] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/05/2021] [Accepted: 04/11/2021] [Indexed: 12/11/2022] Open
Abstract
Many bacteria and archaea produce the redox cofactor F420. F420 is structurally similar to the cofactors FAD and FMN but is catalytically more similar to NAD and NADP. These properties allow F420 to catalyze challenging redox reactions, including key steps in methanogenesis, antibiotic biosynthesis and xenobiotic biodegradation. In the last 5 years, there has been much progress in understanding its distribution, biosynthesis, role and applications. Whereas F420 was previously thought to be confined to Actinobacteria and Euryarchaeota, new evidence indicates it is synthesized across the bacterial and archaeal domains, as a result of extensive horizontal and vertical biosynthetic gene transfer. F420 was thought to be synthesized through one biosynthetic pathway; however, recent advances have revealed variants of this pathway and have resolved their key biosynthetic steps. In parallel, new F420-dependent biosynthetic and metabolic processes have been discovered. These advances have enabled the heterologous production of F420 and identified enantioselective F420H2-dependent reductases for biocatalysis. New research has also helped resolve how microorganisms use F420 to influence human and environmental health, providing opportunities for tuberculosis treatment and methane mitigation. A total of 50 years since its discovery, multiple paradigms associated with F420 have shifted, and new F420-dependent organisms and processes continue to be discovered.
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Affiliation(s)
- Rhys Grinter
- Department of Microbiology, Monash Biomedicine Discovery Institute, Monash University, Clayton, VIC 3800, Australia
| | - Chris Greening
- Department of Microbiology, Monash Biomedicine Discovery Institute, Monash University, Clayton, VIC 3800, Australia
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8
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Zhang J, Yang JD, Cheng JP. Diazaphosphinanes as hydride, hydrogen atom, proton or electron donors under transition-metal-free conditions: thermodynamics, kinetics, and synthetic applications. Chem Sci 2020; 11:3672-3679. [PMID: 34094055 PMCID: PMC8152589 DOI: 10.1039/c9sc05883d] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023] Open
Abstract
Exploration of new hydrogen donors is in large demand in hydrogenation chemistry. Herein, we developed a new 1,3,2-diazaphosphinane 1a, which can serve as a hydride, hydrogen atom or proton donor without transition-metal mediation. The thermodynamics and kinetics of these three pathways of 1a, together with those of its analog 1b, were investigated in acetonitrile. It is noteworthy that, the reduction potentials (Ered) of the phosphenium cations 1a-[P]+ and 1b-[P]+ are extremely low, being −1.94 and −2.39 V (vs. Fc+/0), respectively, enabling corresponding phosphinyl radicals to function as neutral super-electron-donors. Kinetic studies revealed an extraordinarily large kinetic isotope effect KIE(1a) of 31.3 for the hydrogen atom transfer from 1a to the 2,4,6-tri-(tert-butyl)-phenoxyl radical, implying a tunneling effect. Furthermore, successful applications of these diverse P–H bond energetic parameters in organic syntheses were exemplified, shedding light on more exploitations of these versatile and powerful diazaphosphinane reagents in organic chemistry. A new 1,3,2-diazaphosphinane, serving as a formal hydride, hydrogen-atom or proton donor without transition-metal mediation was exploited thermodynamically and kinetically. And, its promising potentials in versatile syntheses have been demonstrated.![]()
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Affiliation(s)
- Jingjing Zhang
- Center of Basic Molecular Science, Department of Chemistry, Tsinghua University Beijing 100084 China
| | - Jin-Dong Yang
- Center of Basic Molecular Science, Department of Chemistry, Tsinghua University Beijing 100084 China
| | - Jin-Pei Cheng
- Center of Basic Molecular Science, Department of Chemistry, Tsinghua University Beijing 100084 China .,State Key Laboratory of Elemento-Organic Chemistry, College of Chemistry, Nankai University Tianjin 300071 China
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9
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Zhao H, Li Y, Zhu XQ. Thermodynamic Parameters of Elementary Steps for 3,5-Disubstituted 1,4-Dihydropyridines To Release Hydride Anions in Acetonitrile. ACS OMEGA 2018; 3:13598-13608. [PMID: 31458065 PMCID: PMC6645033 DOI: 10.1021/acsomega.8b01815] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/30/2018] [Accepted: 10/09/2018] [Indexed: 06/10/2023]
Abstract
A series of 3,5-disubstituted 1,4-dihydropyridine derivatives including the derivative with two chiral centers, 6H (R2 = CH3, CH2Ph), as a new type of organic hydride source were synthesized and characterized. The thermodynamic driving forces (defined as enthalpy changes or standard redox potentials) of the 6 elementary steps for the organic hydrides to release hydride ions in acetonitrile were measured by isothermal titration calorimetry and electrochemical methods. The impacts of the substituents and functional groups bearing the N1 and C3/C5 positions on the thermodynamic driving forces of the 6 elementary steps were examined and analyzed. Moreover, the results showed that the reaction mechanism between the chiral organic hydride and activated ketone (ethyl benzoylformate) was identified as the concerted hydride transfer pathway based on the thermodynamic analysis platform. These valuable and crucial thermodynamic parameters will provide a broadly beneficial impact on the applications of 3,5-disubstituted 1,4-dihydropyridine derivatives in organic synthesis and pharmaceutical chemistry.
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Affiliation(s)
- Hui Zhao
- The
State Key Laboratory of Elemento-Organic Chemistry and Collaborative
Innovation Center of Chemical Science and Engineering (Tianjin), College
of Chemistry, Nankai University, Tianjin 300071, P. R. China
| | - Yang Li
- The
State Key Laboratory of Elemento-Organic Chemistry and Collaborative
Innovation Center of Chemical Science and Engineering (Tianjin), College
of Chemistry, Nankai University, Tianjin 300071, P. R. China
| | - Xiao-Qing Zhu
- The
State Key Laboratory of Elemento-Organic Chemistry and Collaborative
Innovation Center of Chemical Science and Engineering (Tianjin), College
of Chemistry, Nankai University, Tianjin 300071, P. R. China
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10
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Li Y, Zhu XQ. Theoretical Prediction of Activation Free Energies of Various Hydride Self-Exchange Reactions in Acetonitrile at 298 K. ACS OMEGA 2018; 3:872-885. [PMID: 31457934 PMCID: PMC6641257 DOI: 10.1021/acsomega.7b01911] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/03/2017] [Accepted: 01/08/2018] [Indexed: 05/30/2023]
Abstract
Hydride transfer reactions are very important chemical reactions in organic chemistry. It has been a chemist's dream to predict the rate constants of hydride transfer reactions by only using the physical parameters of the reactants. To realize this dream, we have developed a kinetic equation (Zhu equation) in our previous papers to predict the activation free energies of various chemical reactions using the activation free energies of the corresponding self-exchange reactions and the related bond dissociation energies or redox potentials of the reactants. Because the activation free energy of the hydride self-exchange reaction is difficult to measure using the experimental method, in this study, the activation free energies of 159 hydride self-exchange reactions in acetonitrile at 298 K were systematically computed using an accurately benchmarked density functional theory method with a precision of 1.1 kcal mol-1. The results show that the range of the activation free energies of the 159 hydride self-exchange reactions is from 16.1 to 46.6 kcal mol-1. The activation free energies of 25 122 hydride transfer reactions in acetonitrile at 298 K can be estimated using the activation free energies of the 159 hydride self-exchange reactions and the corresponding heterolytic bond dissociation free energies of the reactants. The effects of the heteroatom, substituent, and aromaticity on the activation free energies of hydride self-exchange reactions were examined. The results show that heteroatoms, substituents at the reaction center, and the aromaticity of reactants, all have remarkable effects on the activation free energy of hydride self-exchange reactions. All kinetic information provided in this work on the hydride self-exchange reactions in acetonitrile at 298 K should be very useful in chemical labs and chemical industry.
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Affiliation(s)
- Yang Li
- The State Key Laboratory of Elemento-Organic Chemistry, College of
Chemistry, and Collaborative Innovation Center of Chemical Science and Engineering, Nankai University, Tianjin 300071, P. R. China
| | - Xiao-Qing Zhu
- The State Key Laboratory of Elemento-Organic Chemistry, College of
Chemistry, and Collaborative Innovation Center of Chemical Science and Engineering, Nankai University, Tianjin 300071, P. R. China
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11
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Fu YH, Shen GB, Li Y, Yuan L, Li JL, Li L, Fu AK, Chen JT, Chen BL, Zhu L, Zhu XQ. Realization of Quantitative Estimation for Reaction Rate Constants Using only One Physical Parameter for Each Reactant. ChemistrySelect 2017. [DOI: 10.1002/slct.201601799] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Yan-Hua Fu
- The State Key Laboratory of Elemento-Organic Chemistry; Department of Chemistry; Nankai University; Tianjin 300071 China
| | - Guang-Bin Shen
- The State Key Laboratory of Elemento-Organic Chemistry; Department of Chemistry; Nankai University; Tianjin 300071 China
| | - Yang Li
- The State Key Laboratory of Elemento-Organic Chemistry; Department of Chemistry; Nankai University; Tianjin 300071 China
| | - Lin Yuan
- The State Key Laboratory of Elemento-Organic Chemistry; Department of Chemistry; Nankai University; Tianjin 300071 China
| | - Jun-Ling Li
- The State Key Laboratory of Elemento-Organic Chemistry; Department of Chemistry; Nankai University; Tianjin 300071 China
| | - Le Li
- The State Key Laboratory of Elemento-Organic Chemistry; Department of Chemistry; Nankai University; Tianjin 300071 China
| | - An-Kun Fu
- The State Key Laboratory of Elemento-Organic Chemistry; Department of Chemistry; Nankai University; Tianjin 300071 China
| | - Jin-Ting Chen
- The State Key Laboratory of Elemento-Organic Chemistry; Department of Chemistry; Nankai University; Tianjin 300071 China
| | - Bao-Long Chen
- The State Key Laboratory of Elemento-Organic Chemistry; Department of Chemistry; Nankai University; Tianjin 300071 China
| | - Li Zhu
- The State Key Laboratory of Elemento-Organic Chemistry; Department of Chemistry; Nankai University; Tianjin 300071 China
| | - Xiao-Qing Zhu
- The State Key Laboratory of Elemento-Organic Chemistry; Department of Chemistry; Nankai University; Tianjin 300071 China
- Collaborative Innovation Center of Chemical Science and Engineering; Nankai University; Tianjin 300071 China
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12
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Physiology, Biochemistry, and Applications of F420- and Fo-Dependent Redox Reactions. Microbiol Mol Biol Rev 2016; 80:451-93. [PMID: 27122598 DOI: 10.1128/mmbr.00070-15] [Citation(s) in RCA: 99] [Impact Index Per Article: 12.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023] Open
Abstract
5-Deazaflavin cofactors enhance the metabolic flexibility of microorganisms by catalyzing a wide range of challenging enzymatic redox reactions. While structurally similar to riboflavin, 5-deazaflavins have distinctive and biologically useful electrochemical and photochemical properties as a result of the substitution of N-5 of the isoalloxazine ring for a carbon. 8-Hydroxy-5-deazaflavin (Fo) appears to be used for a single function: as a light-harvesting chromophore for DNA photolyases across the three domains of life. In contrast, its oligoglutamyl derivative F420 is a taxonomically restricted but functionally versatile cofactor that facilitates many low-potential two-electron redox reactions. It serves as an essential catabolic cofactor in methanogenic, sulfate-reducing, and likely methanotrophic archaea. It also transforms a wide range of exogenous substrates and endogenous metabolites in aerobic actinobacteria, for example mycobacteria and streptomycetes. In this review, we discuss the physiological roles of F420 in microorganisms and the biochemistry of the various oxidoreductases that mediate these roles. Particular focus is placed on the central roles of F420 in methanogenic archaea in processes such as substrate oxidation, C1 pathways, respiration, and oxygen detoxification. We also describe how two F420-dependent oxidoreductase superfamilies mediate many environmentally and medically important reactions in bacteria, including biosynthesis of tetracycline and pyrrolobenzodiazepine antibiotics by streptomycetes, activation of the prodrugs pretomanid and delamanid by Mycobacterium tuberculosis, and degradation of environmental contaminants such as picrate, aflatoxin, and malachite green. The biosynthesis pathways of Fo and F420 are also detailed. We conclude by considering opportunities to exploit deazaflavin-dependent processes in tuberculosis treatment, methane mitigation, bioremediation, and industrial biocatalysis.
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Shen GB, Xia K, Li XT, Li JL, Fu YH, Yuan L, Zhu XQ. Prediction of Kinetic Isotope Effects for Various Hydride Transfer Reactions Using a New Kinetic Model. J Phys Chem A 2016; 120:1779-99. [DOI: 10.1021/acs.jpca.5b10135] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Guang-Bin Shen
- Department of Chemistry, The State Key Laboratory
of Elemento-Organic Chemistry and the ‡Collaborative Innovation Center
of Chemical Science and Engineering, Nankai University, Tianjin 300071, China
| | - Ke Xia
- Department of Chemistry, The State Key Laboratory
of Elemento-Organic Chemistry and the ‡Collaborative Innovation Center
of Chemical Science and Engineering, Nankai University, Tianjin 300071, China
| | - Xiu-Tao Li
- Department of Chemistry, The State Key Laboratory
of Elemento-Organic Chemistry and the ‡Collaborative Innovation Center
of Chemical Science and Engineering, Nankai University, Tianjin 300071, China
| | - Jun-Ling Li
- Department of Chemistry, The State Key Laboratory
of Elemento-Organic Chemistry and the ‡Collaborative Innovation Center
of Chemical Science and Engineering, Nankai University, Tianjin 300071, China
| | - Yan-Hua Fu
- Department of Chemistry, The State Key Laboratory
of Elemento-Organic Chemistry and the ‡Collaborative Innovation Center
of Chemical Science and Engineering, Nankai University, Tianjin 300071, China
| | - Lin Yuan
- Department of Chemistry, The State Key Laboratory
of Elemento-Organic Chemistry and the ‡Collaborative Innovation Center
of Chemical Science and Engineering, Nankai University, Tianjin 300071, China
| | - Xiao-Qing Zhu
- Department of Chemistry, The State Key Laboratory
of Elemento-Organic Chemistry and the ‡Collaborative Innovation Center
of Chemical Science and Engineering, Nankai University, Tianjin 300071, China
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14
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Lei NP, Fu YH, Zhu XQ. Elemental step thermodynamics of various analogues of indazolium alkaloids to obtaining hydride in acetonitrile. Org Biomol Chem 2015; 13:11472-85. [PMID: 26451708 DOI: 10.1039/c5ob01715g] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A series of analogues of indazolium alkaloids were designed and synthesized. The thermodynamic driving forces of the 6 elemental steps for the analogues of indazolium alkaloids to obtain hydride in acetonitrile were determined using an isothermal titration calorimeter (ITC) and electrochemical methods, respectively. The effects of molecular structure and substituents on the thermodynamic driving forces of the 6 steps were examined. Meanwhile, the oxidation mechanism of NADH coenzyme by indazolium alkaloids was examined using the chemical mimic method. The result shows that the oxidation of NADH coenzyme by indazolium alkaloids in vivo takes place by one-step concerted hydride transfer mechanism.
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Affiliation(s)
- Nan-Ping Lei
- The State Key Laboratory of Elemento-Organic Chemistry, Department of Chemistry, Collaborative Innovation Center of Chemical Science and Engineering, Nankai University, Tianjin 300071, China.
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