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Yamatsugu K, Kanai M. Catalytic Approaches to Chemo- and Site-Selective Transformation of Carbohydrates. Chem Rev 2023; 123:6793-6838. [PMID: 37126370 DOI: 10.1021/acs.chemrev.2c00892] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/02/2023]
Abstract
Carbohydrates are a fundamental unit playing pivotal roles in all the biological processes. It is thus essential to develop methods for synthesizing, functionalizing, and manipulating carbohydrates for further understanding of their functions and the creation of sugar-based functional materials. It is, however, not trivial to develop such methods, since carbohydrates are densely decorated with polar and similarly reactive hydroxy groups in a stereodefined manner. New approaches to chemo- and site-selective transformations of carbohydrates are, therefore, of great significance for revolutionizing sugar chemistry to enable easier access to sugars of interest. This review begins with a brief overview of the innate reactivity of hydroxy groups of carbohydrates. It is followed by discussions about catalytic approaches to enhance, override, or be orthogonal to the innate reactivity for the transformation of carbohydrates. This review avoids making a list of chemo- and site-selective reactions, but rather focuses on summarizing the concept behind each reported transformation. The literature references were sorted into sections based on the underlying ideas of the catalytic approaches, which we hope will help readers have a better sense of the current state of chemistry and develop innovative ideas for the field.
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Affiliation(s)
- Kenzo Yamatsugu
- Graduate School of Pharmaceutical Sciences, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-0033, Japan
| | - Motomu Kanai
- Graduate School of Pharmaceutical Sciences, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-0033, Japan
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2
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Tanaka F. Amines as Catalysts: Dynamic Features and Kinetic Control of Catalytic Asymmetric Chemical Transformations to Form C-C Bonds and Complex Molecules. CHEM REC 2022:e202200207. [PMID: 36202628 DOI: 10.1002/tcr.202200207] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2022] [Revised: 09/15/2022] [Indexed: 11/06/2022]
Abstract
Carbonyl transformations involving enolates and/or enamines have been used for various types of bond-forming reactions. In this account, catalysts and catalyst systems that have amino acids or primary, secondary, and/or tertiary amines as key catalytic functional groups that we have developed to accelerate chemical transformations, including regio-, diastereo- and enantioselective reactions, are discussed. Our chemical transformation strategies and methods that use amine derivatives as catalysts are also discussed. As amines can have different functions depending on protonation and on the species formed during the catalysis (such as enamines and iminium ions), dynamics and kinetic controls are the keys for understanding the catalysis. Further, strategies that harness dynamic steps and kinetic control in amine-catalyzed reactions have enabled the synthesis of complex molecules in stereocontrolled manners. Understanding the dynamic features and the kinetic controls of the catalysis will further the design of the catalysts and the development of chemical transformation strategies and methods.
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Affiliation(s)
- Fujie Tanaka
- Chemistry and Chemical Bioengineering Unit, Okinawa Institute of Science and Technology Graduate University, 1919-1 Tancha, Onna, Okinawa, 904-0495, Japan
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3
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Abuduaini T, Li S, Roy V, Agrofoglio LA, Martin OR, Nicolas C. Tunable Approach to C-Linked Analogs of Glycosamines. J Org Chem 2022; 87:13396-13405. [PMID: 36082689 DOI: 10.1021/acs.joc.2c01650] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The synthesis of (1R)-2-amino-2-deoxy-β-l-gulopyranosyl benzene and the α and β forms of 2-amino-2-deoxy-l-idopyranosyl benzene derivatives was accomplished through stereospecific addition of tributylstannyllithium to readily available (SR)- or (SS)-N-tert-butanesulfinyl-arabinofuranosylamine building blocks, followed by stereoretentive Pd-catalyzed Migita-Kosugi-Stille cross-coupling, stereoselective reduction, and an activation-cyclization strategy. Application of this methodology paves the way to new three-dimensional chemical space and preparation of unknown (non-natural) and complex 2-amino-2-deoxy sugars of biological interest.
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Affiliation(s)
- Tuniyazi Abuduaini
- Institut de Chimie Organique et Analytique, UMR CNRS 7311, Université d'Orléans, Rue de Chartres, BP 6759, 45067 Orléans Cedex 2, France
| | - Sizhe Li
- Institut de Chimie Organique et Analytique, UMR CNRS 7311, Université d'Orléans, Rue de Chartres, BP 6759, 45067 Orléans Cedex 2, France
| | - Vincent Roy
- Institut de Chimie Organique et Analytique, UMR CNRS 7311, Université d'Orléans, Rue de Chartres, BP 6759, 45067 Orléans Cedex 2, France
| | - Luigi A Agrofoglio
- Institut de Chimie Organique et Analytique, UMR CNRS 7311, Université d'Orléans, Rue de Chartres, BP 6759, 45067 Orléans Cedex 2, France
| | - Olivier R Martin
- Institut de Chimie Organique et Analytique, UMR CNRS 7311, Université d'Orléans, Rue de Chartres, BP 6759, 45067 Orléans Cedex 2, France
| | - Cyril Nicolas
- Institut de Chimie Organique et Analytique, UMR CNRS 7311, Université d'Orléans, Rue de Chartres, BP 6759, 45067 Orléans Cedex 2, France
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4
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Gallier F, E Miranda LSDM. Organocatalysis applied to carbohydrates: from roots to current developments. Org Biomol Chem 2021; 20:919-933. [PMID: 34931627 DOI: 10.1039/d1ob01919h] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Organocatalysis emerged in the last decade as a powerful tool for the synthesis of complex molecules. In the field of carbohydrates, it found widespread use in the synthesis of rare and non-natural carbohydrate derivatives. Additionally, it has also found important application in the stereoselective functionalization of the anomeric carbon in glycosylation reactions. These efforts culminated in the development of different types of catalysts operating through distinct activation modes that allow the selective synthesis of α- or β-glycosides even on daunting substrates. All these advances starting from its first examples in carbohydrate synthesis to the current developments in glycosylation reactions are reviewed.
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Affiliation(s)
- Florian Gallier
- CY Cergy Paris Université, CNRS, BioCIS, 95000, Cergy-Pontoise, France. .,Université Paris-Saclay, CNRS, BioCIS, 92290, Châtenay-Malabry, France
| | - Leandro Soter de Mariz E Miranda
- CY Cergy Paris Université, CNRS, BioCIS, 95000, Cergy-Pontoise, France. .,Université Paris-Saclay, CNRS, BioCIS, 92290, Châtenay-Malabry, France.,Biocatalysis and Organic Synthesis Group, Universidade Federal do Rio de Janeiro, Av Athos da Silveira Ramos 149, Centro de Tecnologia, Bl A, 21941909 Ilha do Fundão, Rio de Janeiro, Brazil
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5
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Hirao Y, Kanzaki Y, Mitsunuma H, Kanai M. A 4-hydroxyproline/trimethyl borate system for asymmetric synthesis of triple aldols from double aldol cyclic hemiacetals. Tetrahedron 2021. [DOI: 10.1016/j.tet.2021.132448] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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6
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Reddy YP, Gudise VB, Settipalli PC, Anwar S. Synthesis of Multisubstituted Indanedione Based Spiropyrans via Oxa‐Michael/Michael Cascade Reaction. ChemistrySelect 2021. [DOI: 10.1002/slct.202100915] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
- Yeruva Pavankumar Reddy
- Division of Chemistry Department of Sciences and Humanities Vignan's Foundation for Science Technology and Research (Deemed to be University) Vadlamudi, Guntur 522 213 Andhra Pradesh India
| | - Veera Babu Gudise
- Division of Chemistry Department of Sciences and Humanities Vignan's Foundation for Science Technology and Research (Deemed to be University) Vadlamudi, Guntur 522 213 Andhra Pradesh India
| | - Poorna Chandrasekhar Settipalli
- Division of Chemistry Department of Sciences and Humanities Vignan's Foundation for Science Technology and Research (Deemed to be University) Vadlamudi, Guntur 522 213 Andhra Pradesh India
| | - Shaik Anwar
- Division of Chemistry Department of Sciences and Humanities Vignan's Foundation for Science Technology and Research (Deemed to be University) Vadlamudi, Guntur 522 213 Andhra Pradesh India
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7
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Cao ZL, Zhu C, Wu WY, Zhu DD, Qian D, Zhu J, Chang TG, Sheng M, Yang XL, Liu WW. Synthesis of β-acylamino furans from glucosamine. J Carbohydr Chem 2021. [DOI: 10.1080/07328303.2021.1895195] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
Affiliation(s)
- Zhi-ling Cao
- Jiangsu Key Laboratory of Marine Pharmaceutical Compound Screening, Jiangsu Institute of Marine Resources, Co-Innovation Center of Jiangsu Marine Bio-Industry Technology, Jiangsu Ocean University, Lianyungang, China
| | - Cong Zhu
- Jiangsu Key Laboratory of Marine Pharmaceutical Compound Screening, Jiangsu Institute of Marine Resources, Co-Innovation Center of Jiangsu Marine Bio-Industry Technology, Jiangsu Ocean University, Lianyungang, China
| | - Wen-ying Wu
- Jiangsu Key Laboratory of Marine Pharmaceutical Compound Screening, Jiangsu Institute of Marine Resources, Co-Innovation Center of Jiangsu Marine Bio-Industry Technology, Jiangsu Ocean University, Lianyungang, China
| | - Dan-dan Zhu
- Jiangsu Key Laboratory of Marine Pharmaceutical Compound Screening, Jiangsu Institute of Marine Resources, Co-Innovation Center of Jiangsu Marine Bio-Industry Technology, Jiangsu Ocean University, Lianyungang, China
| | - Dong Qian
- Jiangsu Key Laboratory of Marine Pharmaceutical Compound Screening, Jiangsu Institute of Marine Resources, Co-Innovation Center of Jiangsu Marine Bio-Industry Technology, Jiangsu Ocean University, Lianyungang, China
| | - Jian Zhu
- Jiangsu Key Laboratory of Marine Pharmaceutical Compound Screening, Jiangsu Institute of Marine Resources, Co-Innovation Center of Jiangsu Marine Bio-Industry Technology, Jiangsu Ocean University, Lianyungang, China
| | - Tian-ge Chang
- Jiangsu Key Laboratory of Marine Pharmaceutical Compound Screening, Jiangsu Institute of Marine Resources, Co-Innovation Center of Jiangsu Marine Bio-Industry Technology, Jiangsu Ocean University, Lianyungang, China
| | - Mei Sheng
- Jiangsu Key Laboratory of Marine Pharmaceutical Compound Screening, Jiangsu Institute of Marine Resources, Co-Innovation Center of Jiangsu Marine Bio-Industry Technology, Jiangsu Ocean University, Lianyungang, China
| | - Xiu-li Yang
- Jiangsu Key Laboratory of Marine Pharmaceutical Compound Screening, Jiangsu Institute of Marine Resources, Co-Innovation Center of Jiangsu Marine Bio-Industry Technology, Jiangsu Ocean University, Lianyungang, China
| | - Wei-wei Liu
- Jiangsu Key Laboratory of Marine Pharmaceutical Compound Screening, Jiangsu Institute of Marine Resources, Co-Innovation Center of Jiangsu Marine Bio-Industry Technology, Jiangsu Ocean University, Lianyungang, China
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8
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Ahmad T, Ullah N. The oxa-Michael reaction in the synthesis of 5- and 6-membered oxygen-containing heterocycles. Org Chem Front 2021. [DOI: 10.1039/d0qo01312a] [Citation(s) in RCA: 23] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
In this review, we provide an updated account on the recent advances and applications of oxa-Michael reaction in the synthesis 5- and 6-membered monocyclic oxygen-containing heterocyclic compounds published in the literature since 2013 to date.
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Affiliation(s)
- Tauqir Ahmad
- Chemistry Department
- King Fahd University of Petroleum and Minerals
- Dhahran 31261
- Saudi Arabia
| | - Nisar Ullah
- Chemistry Department
- King Fahd University of Petroleum and Minerals
- Dhahran 31261
- Saudi Arabia
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9
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Salta J, Reissig H. Divalent Triazole‐Linked Carbohydrate Mimetics: Synthesis by Click Chemistry and Evaluation as Selectin Ligands. European J Org Chem 2020. [DOI: 10.1002/ejoc.202000618] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Affiliation(s)
- Joana Salta
- Institut für Chemie und Biochemie Freie Universität Berlin Takustrasse 3 14195 Berlin Germany
| | - Hans‐Ulrich Reissig
- Institut für Chemie und Biochemie Freie Universität Berlin Takustrasse 3 14195 Berlin Germany
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10
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Stier K, Checinski MP, Witte SNR, Mahrwald R. Matched/Mismatched Cases in Proline-Catalyzed Cascade Reactions with Carbohydrates: A Computational Insight into the Role of d- and l-Proline. J Org Chem 2019; 84:1201-1217. [PMID: 30543442 DOI: 10.1021/acs.joc.8b02530] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
Abstract
The cascade reactions of carbohydrates with methyl ketones in the presence of proline feature complex running reaction steps. By extensive quantum mechanical simulation, a coherent reaction mechanism was identified matching the experimental data. The present calculations indicate a Mannich reaction/proline hydrolysis/retro aza-Michael cascade to form an intermediate α,β-unsaturated ethyl ketone. This key precursor yields C-glycosides by a final intramolecular amine-catalyzed oxa-Michael addition. Additionally, the formation of this intermediate determines the rate and selectivity of the overall cascade reaction. Strongly matched and mismatched cases were observed when used with d- or l-proline. They are consistent with the calculated energy barriers of the corresponding transition states.
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Affiliation(s)
- Kenta Stier
- CreativeQuantum GmbH , Am Studio 2 , 12489 Berlin , Germany
| | | | - Swjatoslaw N R Witte
- Institute of Organic Chemistry , Leibnitz University, Hannover , Schneiderberg 1 B 30167 Hannover , Germany
| | - Rainer Mahrwald
- Institute of Chemistry , Humboldt University Berlin , Brook-Taylor Str. 2 , 12484 Berlin , Germany
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11
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Bensalah FO, Bil A, Wittine K, Bellahouel S, Lesur D, Markovic D, Laclef S. Solvent- and catalyst-free transamidations of unprotected glycosyl carboxamides. Org Biomol Chem 2019; 17:9425-9429. [DOI: 10.1039/c9ob02096a] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
New green and atom efficient transamidation reactions of various glycosyl carboxamides with primary and secondary amines are described.
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Affiliation(s)
- Fouzia Ouadah Bensalah
- Laboratoire de Glycochimie
- des Antimicrobiens et des Agroressources (LG2A) UMR CNRS 7378 – Institut de Chimie de Picardie FR 3085
- Université de Picardie Jules Verne
- FR-80039 Amiens Cedex
- France
| | - Abed Bil
- Laboratoire de Glycochimie
- des Antimicrobiens et des Agroressources (LG2A) UMR CNRS 7378 – Institut de Chimie de Picardie FR 3085
- Université de Picardie Jules Verne
- FR-80039 Amiens Cedex
- France
| | - Karlo Wittine
- University of Rijeka
- Department of Biotechnology
- 51000 Rijeka
- Croatia
| | - Salima Bellahouel
- Université Oran1
- Laboratoire de Synthèse Organique Appliquée LSOA
- Oran 31000
- Algérie
| | - David Lesur
- Laboratoire de Glycochimie
- des Antimicrobiens et des Agroressources (LG2A) UMR CNRS 7378 – Institut de Chimie de Picardie FR 3085
- Université de Picardie Jules Verne
- FR-80039 Amiens Cedex
- France
| | - Dean Markovic
- University of Rijeka
- Department of Biotechnology
- 51000 Rijeka
- Croatia
| | - Sylvain Laclef
- Laboratoire de Glycochimie
- des Antimicrobiens et des Agroressources (LG2A) UMR CNRS 7378 – Institut de Chimie de Picardie FR 3085
- Université de Picardie Jules Verne
- FR-80039 Amiens Cedex
- France
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12
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Tanaka F, Enukonda J, Johnson S. C-Glycosidation of Unprotected Aldopentoses with Ketones Using Proline-Triethylamine as Catalyst. HETEROCYCLES 2019. [DOI: 10.3987/com-18-s(f)13] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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13
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Johnson S, Bagdi AK, Tanaka F. C-Glycosidation of Unprotected Di- and Trisaccharide Aldopyranoses with Ketones Using Pyrrolidine-Boric Acid Catalysis. J Org Chem 2018; 83:4581-4597. [DOI: 10.1021/acs.joc.8b00340] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Affiliation(s)
- Sherida Johnson
- Chemistry and Chemical Bioengineering Unit, Okinawa Institute of Science and Technology Graduate University, 1919-1 Tancha, Onna, Okinawa 904-0495, Japan
| | - Avik Kumar Bagdi
- Chemistry and Chemical Bioengineering Unit, Okinawa Institute of Science and Technology Graduate University, 1919-1 Tancha, Onna, Okinawa 904-0495, Japan
| | - Fujie Tanaka
- Chemistry and Chemical Bioengineering Unit, Okinawa Institute of Science and Technology Graduate University, 1919-1 Tancha, Onna, Okinawa 904-0495, Japan
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14
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Malinowski M, Rowicki T, Guzik P, Wielechowska M, Sas W. Synthesis of Carbohydrate Mimetics by Intramolecular 1,3-Dipolar Cycloaddition of N
-(3-Alkenyl)nitrones Derived from Unprotected d
-Aldopentoses. European J Org Chem 2018. [DOI: 10.1002/ejoc.201701512] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Maciej Malinowski
- Faculty of Chemistry; Warsaw University of Technology; ul. Noakowskiego 3 00-664 Warsaw Poland
| | - Tomasz Rowicki
- Faculty of Chemistry; Warsaw University of Technology; ul. Noakowskiego 3 00-664 Warsaw Poland
| | - Patrycja Guzik
- Faculty of Chemistry; Warsaw University of Technology; ul. Noakowskiego 3 00-664 Warsaw Poland
| | - Monika Wielechowska
- Faculty of Chemistry; Warsaw University of Technology; ul. Noakowskiego 3 00-664 Warsaw Poland
| | - Wojciech Sas
- Faculty of Chemistry; Warsaw University of Technology; ul. Noakowskiego 3 00-664 Warsaw Poland
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15
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Affiliation(s)
- You Yang
- Shanghai
Key Laboratory of New Drug Design, School of Pharmacy, East China University of Science and Technology, 130 Meilong Road, Shanghai 200237, China
| | - Biao Yu
- State
Key Laboratory of Bio-organic and Natural Products Chemistry, Shanghai
Institute of Organic Chemistry, Chinese Academy of Sciences, 345 Lingling Road, Shanghai 200032, China
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16
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Wei X, Shi S, Xie X, Shimizu Y, Kanai M. Copper(I)-Catalyzed Dehydrative C-Glycosidation of Unprotected Pyranoses with Ketones. ACS Catal 2016. [DOI: 10.1021/acscatal.6b02106] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- XiaoFeng Wei
- Graduate
School of Pharmaceutical Sciences, The University of Tokyo, 7-3-1, Hongo, Bunkyo-ku, Tokyo 113-0033, Japan
| | - ShiLiang Shi
- Graduate
School of Pharmaceutical Sciences, The University of Tokyo, 7-3-1, Hongo, Bunkyo-ku, Tokyo 113-0033, Japan
- State
Key Laboratory of Organometallic Chemistry, Shanghai Institute of
Organic Chemistry, Chinese Academy of Sciences, 345 Lingling Lu, Shanghai 200032, China
| | - XiaoWei Xie
- Graduate
School of Pharmaceutical Sciences, The University of Tokyo, 7-3-1, Hongo, Bunkyo-ku, Tokyo 113-0033, Japan
| | - Yohei Shimizu
- Graduate
School of Pharmaceutical Sciences, The University of Tokyo, 7-3-1, Hongo, Bunkyo-ku, Tokyo 113-0033, Japan
| | - Motomu Kanai
- Graduate
School of Pharmaceutical Sciences, The University of Tokyo, 7-3-1, Hongo, Bunkyo-ku, Tokyo 113-0033, Japan
- ERATO, Japan Science
and Technology Agency, Kanai Life Science Catalysis Project, Hongo, Bunkyo-ku, Tokyo 113-0033, Japan
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