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Kumar R, Dohi T, Zhdankin VV. Organohypervalent heterocycles. Chem Soc Rev 2024; 53:4786-4827. [PMID: 38545658 DOI: 10.1039/d2cs01055k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/08/2024]
Abstract
This review summarizes the structural and synthetic aspects of heterocyclic molecules incorporating an atom of a hypervalent main-group element. The term "hypervalent" has been suggested for derivatives of main-group elements with more than eight valence electrons, and the concept of hypervalency is commonly used despite some criticism from theoretical chemists. The significantly higher thermal stability of hypervalent heterocycles compared to their acyclic analogs adds special features to their chemistry, particularly for bromine and iodine. Heterocyclic compounds of elements with double bonds are not categorized as hypervalent molecules owing to the zwitterionic nature of these bonds, resulting in the conventional 8-electron species. This review is focused on hypervalent heterocyclic derivatives of nonmetal main-group elements, such as boron, silicon, nitrogen, carbon, phosphorus, sulfur, selenium, bromine, chlorine, iodine(III) and iodine(V).
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Affiliation(s)
- Ravi Kumar
- Department of Chemistry, J C Bose University of Science and Technology, YMCA, NH-2, Sector-6, Mathura Road, Faridabad, 121006, Haryana, India.
| | - Toshifumi Dohi
- Graduate School of Pharmaceutical Sciences, Ritsumeikan University, 1-1-1 Nojihigashi, Kusatsu, Shiga, 525-8577, Japan.
| | - Viktor V Zhdankin
- Department of Chemistry and Biochemistry, 1038 University Drive, 126 HCAMS University of Minnesota Duluth, Duluth, Minnesota 55812, USA.
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Yamamoto Y, Shi Y, Masui T, Saito D, Inoue T, Sato H, Dohi C, Muneta E, Shang R, Nakamoto M. Synthesis and Characterization of Hypervalent Pentacoordinate Carbon Compounds Bearing a 7-6-7-Ring Skeleton. Chemistry 2023; 29:e202203162. [PMID: 36372771 DOI: 10.1002/chem.202203162] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2022] [Revised: 11/07/2022] [Accepted: 11/11/2022] [Indexed: 11/15/2022]
Abstract
To stabilize SN 2 transition state-like penta-coordinate carbon species, triaryl-substituted cationic carbon compounds bearing a moderately flexible 7-6-7-ring skeleton with sulfur donors were synthesized and characterized. Electronic effects of para substituents (R=Cl, F, H, CH3 , SMe, OMe) of the two equatorial aryl groups bound to the cationic central carbon were investigated systematically along with a planar bidentate thioxanthene derivative. X-ray analysis on their solid-state structures showed that the parent (R=H), chloro-, fluoro- and methyl-derivatives were tetracoordinate carbon (sulfonium) structures, while the p-MeO and thioxanthenyl system were pentacoordinate carbocation structures. The Hammett substituent constants for the para substituents (σp + ) correlates well with the bonding in these compounds. The methylthio-derivative with intermediate Hammett substituent constants (p-MeS; σp + =-0.60) showed a tetracooridnate solid-state structure, though solution UV-Vis properties suggested the presence of a penta-coordinate structure. These findings amount to the first unambiguous solution evidence of the hypervalent apical 3c-4e interactions in pentacoordinate carbon compounds.
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Affiliation(s)
- Yohsuke Yamamoto
- Graduated School of Advanced Science and Engineering, Hiroshima University, 1-3-1 Kagamiyama, Higashi, Hiroshima, 739-8526, Japan
| | - Yuan Shi
- Graduated School of Advanced Science and Engineering, Hiroshima University, 1-3-1 Kagamiyama, Higashi, Hiroshima, 739-8526, Japan
| | - Takashi Masui
- Graduated School of Advanced Science and Engineering, Hiroshima University, 1-3-1 Kagamiyama, Higashi, Hiroshima, 739-8526, Japan
| | - Daigo Saito
- Graduated School of Advanced Science and Engineering, Hiroshima University, 1-3-1 Kagamiyama, Higashi, Hiroshima, 739-8526, Japan
| | - Tatsuya Inoue
- Graduated School of Advanced Science and Engineering, Hiroshima University, 1-3-1 Kagamiyama, Higashi, Hiroshima, 739-8526, Japan
| | - Hitomi Sato
- Graduated School of Advanced Science and Engineering, Hiroshima University, 1-3-1 Kagamiyama, Higashi, Hiroshima, 739-8526, Japan
| | - Chisato Dohi
- Graduated School of Advanced Science and Engineering, Hiroshima University, 1-3-1 Kagamiyama, Higashi, Hiroshima, 739-8526, Japan
| | - Emiko Muneta
- Graduated School of Advanced Science and Engineering, Hiroshima University, 1-3-1 Kagamiyama, Higashi, Hiroshima, 739-8526, Japan
| | - Rong Shang
- Graduated School of Advanced Science and Engineering, Hiroshima University, 1-3-1 Kagamiyama, Higashi, Hiroshima, 739-8526, Japan
| | - Masaaki Nakamoto
- Graduated School of Advanced Science and Engineering, Hiroshima University, 1-3-1 Kagamiyama, Higashi, Hiroshima, 739-8526, Japan
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Jones RO. The chemical bond in solids-revisited. JOURNAL OF PHYSICS. CONDENSED MATTER : AN INSTITUTE OF PHYSICS JOURNAL 2022; 34:343001. [PMID: 35636399 DOI: 10.1088/1361-648x/ac7494] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/04/2022] [Accepted: 05/30/2022] [Indexed: 06/15/2023]
Abstract
This article complements an earlier topical review of the chemical bond (Jones 2018J. Phys.: Condens. Matter30153001), starting in the mid-19th century and seen from the perspective of a condensed matter physicist. The discussion of applications focused on the structure and properties of phase change materials. We review here additional aspects of chemistry, particularly some that have raised interest recently in this context. Concepts such as 'electron-rich', 'electron-deficient (excess orbital)', 'hypervalent', 'three-centre', and 'metavalent' bonds, and 'multicentre hyperbonding' are now found in the condensed matter literature. They are surveyed here, as well as the bond in metals and the 'Peierls' distortion. What are these concepts, are they related, and are they sometimes new labels for established, but unfamiliar ideas? 'Half bonds' and 'fractional valencies' play a central role in this discussion. It is remarkable that they were introduced 100 years ago, but ignored or forgotten, and have needed to be rediscovered more than once.
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Affiliation(s)
- R O Jones
- Peter-Grünberg-Institut PGI-1 and JARA/HPC, Forschungszentrum Jülich, D-52425 Jülich, Germany
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Weinhold F. Sulfur Tetrahydride and Allied Superhydride Clusters: When Resonance Takes Precedence. Chemistry 2021; 27:6748-6759. [PMID: 33566389 DOI: 10.1002/chem.202005420] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2020] [Revised: 02/08/2021] [Indexed: 11/08/2022]
Abstract
Sulfur offers a variety of bonding surprises compared to the parent oxygen atom of the chalcogen family. In the present work, we employ standard quantum chemistry methods to characterize formation of previously unrecognized sulfur tetrahydride (C4v -symmetric SH4 ) from hydrogen sulfide (H2 S) and molecular hydrogen (H2 ) on the ground state potential energy surface. The unusual intramolecular interactions of SH4 defy Lewis-like bonding conceptions, exhibiting the dominance of resonance-type donor-acceptor delocalizations well beyond those of SF4 (C2v sawhorse geometry) and other known tetrahalides. The distressed character of SH4 bonding also leads to exotic intermolecular structural motifs in clusters of pure (SH4 )n and mixed (SH4 ⋅⋅⋅H2 S)n composition. We evaluate structural, spectroscopic, and electronic properties for various 2D/3D coordination patterns and discuss how (SH4 ⋅⋅⋅H2 S)n -type building blocks may relate to recent experimental studies of superconductivity in high-pressure materials of "SH3 " stoichiometry.
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Affiliation(s)
- Frank Weinhold
- Theoretical Chemistry Institute and Department of Chemistry, University of Wisconsin-Madison, Madison, WI, 53706, USA
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Yan C, Takeshita M, Nakatsuji JY, Kurosaki A, Sato K, Shang R, Nakamoto M, Yamamoto Y, Adachi Y, Furukawa K, Kishi R, Nakano M. Synthesis and properties of hypervalent electron-rich pentacoordinate nitrogen compounds. Chem Sci 2020; 11:5082-5088. [PMID: 34122965 PMCID: PMC8159240 DOI: 10.1039/d0sc00002g] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Isolation and structural characterization of hypervalent electron-rich pentacoordinate nitrogen species have not been achieved despite continuous attempts for over a century. Herein we report the first synthesis and isolation of air stable hypervalent electron-rich pentacoordinate nitrogen cationic radical (11-N-5) species from oxidation of their corresponding neutral (12-N-5) species. In the cationic radical species, the nitrogen centers adopt a trigonal bipyramidal geometry featuring a 3-center-5-electron hypervalent attractive interaction. The combination of single crystal X-ray diffraction analysis and computational studies revealed weak N-O interactions between the central nitrogen cation and oxygen atoms. This successful design strategy and isolation of air-stable pentacoordinate hypervalent nitrogen species allow further investigations on reactivity and properties resulting from these unusually weakly coordinating interactions in nitrogen compounds.
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Affiliation(s)
- Chenting Yan
- Department of Chemistry, Graduate School of Science, Hiroshima University 1-3-1 Kagamiyama Higashi-Hiroshima 739-8526 Japan
| | - Masato Takeshita
- Department of Chemistry, Graduate School of Science, Hiroshima University 1-3-1 Kagamiyama Higashi-Hiroshima 739-8526 Japan
| | - Jun-Ya Nakatsuji
- Department of Chemistry, Graduate School of Science, Hiroshima University 1-3-1 Kagamiyama Higashi-Hiroshima 739-8526 Japan
| | - Akihiro Kurosaki
- Department of Chemistry, Graduate School of Science, Hiroshima University 1-3-1 Kagamiyama Higashi-Hiroshima 739-8526 Japan
| | - Kaoko Sato
- Department of Chemistry, Graduate School of Science, Hiroshima University 1-3-1 Kagamiyama Higashi-Hiroshima 739-8526 Japan
| | - Rong Shang
- Department of Chemistry, Graduate School of Science, Hiroshima University 1-3-1 Kagamiyama Higashi-Hiroshima 739-8526 Japan
| | - Masaaki Nakamoto
- Department of Chemistry, Graduate School of Science, Hiroshima University 1-3-1 Kagamiyama Higashi-Hiroshima 739-8526 Japan
| | - Yohsuke Yamamoto
- Department of Chemistry, Graduate School of Science, Hiroshima University 1-3-1 Kagamiyama Higashi-Hiroshima 739-8526 Japan
| | - Yohei Adachi
- Department of Applied Chemistry, Graduate School of Engineering, Hiroshima University 1-3-1 Kagamiyama Higashi-Hiroshima 739-8526 Japan
| | - Ko Furukawa
- Center for Coordination Research Facilities, Institute for Research Promotion, Niigata University 8050 Ikarashi 2-no-cho, Nishi-ku Niigata 950-2181 Japan
| | - Ryohei Kishi
- Department of Materials Engineering Science, Graduate School of Engineering Science, Osaka University Toyonaka Osaka 560-8531 Japan
| | - Masayoshi Nakano
- Department of Materials Engineering Science, Graduate School of Engineering Science, Osaka University Toyonaka Osaka 560-8531 Japan.,Department of Materials Engineering Science, Graduate School of Engineering Science, Osaka University Toyonaka Osaka 560-8531 Japan
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Keil H, Hellström M, Stückl C, Herbst‐Irmer R, Behler J, Stalke D. New Insights into the Catalytic Activity of Cobalt Orthophosphate Co 3 (PO 4 ) 2 from Charge Density Analysis. Chemistry 2019; 25:15786-15794. [PMID: 31361370 PMCID: PMC6916324 DOI: 10.1002/chem.201902303] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2019] [Indexed: 11/18/2022]
Abstract
An extensive characterization of Co3 (PO4 )2 was performed by topological analysis according to Bader's Quantum Theory of Atoms in Molecules from the experimentally and theoretically determined electron density. This study sheds light on the reactivity of cobalt orthophosphate as a solid-state heterogeneous oxidative-dehydration and -dehydrogenation catalyst. Various faces of the bulk catalyst were identified as possible reactive sites given their topological properties. The charge accumulations and depletions around the two independent five- and sixfold-coordinated cobalt atoms, found in the topological analysis, are correlated to the orientation and population of the d-orbitals. It is shown that the (011) face has the best structural features for catalysis. Fivefold-coordinated ions in close proximity to advantageously oriented vacant coordination sites and electron depletions suit the oxygen lone pairs of the reactant, mainly for chemisorption. This is confirmed both from the multipole refinement as well as from density functional theory calculations. Nearby basic phosphate ions are readily available for C-H activation.
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Affiliation(s)
- Helena Keil
- Universität GöttingenInstitut für Anorganische ChemieTammannstrasse 437977GöttingenGermany
| | - Matti Hellström
- Universität GöttingenInstitut für Physikalische Chemie, Theoretische ChemieTammannstrasse 637077GöttingenGermany
- Current address: Software for Chemistry and Materials B.V.De Boelelaan 10831081HVAmsterdamThe Netherlands
| | - Claudia Stückl
- Universität GöttingenInstitut für Anorganische ChemieTammannstrasse 437977GöttingenGermany
| | - Regine Herbst‐Irmer
- Universität GöttingenInstitut für Anorganische ChemieTammannstrasse 437977GöttingenGermany
| | - Jörg Behler
- Universität GöttingenInstitut für Physikalische Chemie, Theoretische ChemieTammannstrasse 637077GöttingenGermany
| | - Dietmar Stalke
- Universität GöttingenInstitut für Anorganische ChemieTammannstrasse 437977GöttingenGermany
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Hupf E, Olaru M, Raţ CI, Fugel M, Hübschle CB, Lork E, Grabowsky S, Mebs S, Beckmann J. Mapping the Trajectory of Nucleophilic Substitution at Silicon Using aperi-Substituted Acenaphthyl Scaffold. Chemistry 2017; 23:10568-10579. [DOI: 10.1002/chem.201700992] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2017] [Indexed: 11/07/2022]
Affiliation(s)
- Emanuel Hupf
- Institut für Anorganische Chemie und Kristallographie; Fachbereich 2-Biologie/Chemie; Universität Bremen; Leobener Straße NW2 28359 Bremen Germany
- Current address: Department of Chemistry; University of Alberta; Edmonton Alberta T6G 2G2 Canada
| | - Marian Olaru
- Institut für Anorganische Chemie und Kristallographie; Fachbereich 2-Biologie/Chemie; Universität Bremen; Leobener Straße NW2 28359 Bremen Germany
- Centre of Supramolecular Organic and Organometallic Chemistry; Department of Chemistry, Faculty of Chemistry and Chemical Engineering; Babes-Bolyai University; 11 Arany Janos Street 400028 Cluj-Napoca Romania
| | - Ciprian I. Raţ
- Centre of Supramolecular Organic and Organometallic Chemistry; Department of Chemistry, Faculty of Chemistry and Chemical Engineering; Babes-Bolyai University; 11 Arany Janos Street 400028 Cluj-Napoca Romania
| | - Malte Fugel
- Institut für Anorganische Chemie und Kristallographie; Fachbereich 2-Biologie/Chemie; Universität Bremen; Leobener Straße NW2 28359 Bremen Germany
| | | | - Enno Lork
- Institut für Anorganische Chemie und Kristallographie; Fachbereich 2-Biologie/Chemie; Universität Bremen; Leobener Straße NW2 28359 Bremen Germany
| | - Simon Grabowsky
- Institut für Anorganische Chemie und Kristallographie; Fachbereich 2-Biologie/Chemie; Universität Bremen; Leobener Straße NW2 28359 Bremen Germany
| | - Stefan Mebs
- Institut für Experimentalphysik; Freie Universität Berlin; Arnimallee 14 14195 Berlin Germany
| | - Jens Beckmann
- Institut für Anorganische Chemie und Kristallographie; Fachbereich 2-Biologie/Chemie; Universität Bremen; Leobener Straße NW2 28359 Bremen Germany
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Comments on valence-bond structures and charge-shift + recoupled-pair bonding for symmetrical 4-electron 3-centre bonding units. Chem Phys Lett 2016. [DOI: 10.1016/j.cplett.2016.04.063] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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