1
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Kozlenko AS, Ozhogin IV, Pugachev AD, Lukyanova MB, El-Sewify IM, Lukyanov BS. A Modern Look at Spiropyrans: From Single Molecules to Smart Materials. Top Curr Chem (Cham) 2023; 381:8. [PMID: 36624333 DOI: 10.1007/s41061-022-00417-2] [Citation(s) in RCA: 9] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2022] [Accepted: 11/30/2022] [Indexed: 01/11/2023]
Abstract
Photochromic compounds of the spiropyran family have two main isomers capable of inter-switching with UV or visible light. In the current review, we discuss recent advances in the synthesis, investigation of properties, and applications of spiropyran derivatives. Spiropyrans of the indoline series are in focus as the most promising representatives of multi-sensitive spirocyclic compounds, which can be switched by a number of external stimuli, including light, temperature, pH, presence of metal ions, and mechanical stress. Particular attention is paid to the structural features of molecules, their influence on photochromic properties, and the reactions taking place during isomerization, as the understanding of the structure-property relationships will rationalize the synthesis of compounds with predetermined characteristics. The main prospects for applications of spiropyrans in such fields as smart material production, molecular electronics and nanomachinery, sensing of environmental and biological molecules, and photopharmacology are also discussed.
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Affiliation(s)
- Anastasia S Kozlenko
- Institute of Physical and Organic Chemistry, Southern Federal University, Stachki Prosp., 194/2, Rostov-On-Don, 344090, Russia.
| | - Ilya V Ozhogin
- Institute of Physical and Organic Chemistry, Southern Federal University, Stachki Prosp., 194/2, Rostov-On-Don, 344090, Russia
| | - Artem D Pugachev
- Institute of Physical and Organic Chemistry, Southern Federal University, Stachki Prosp., 194/2, Rostov-On-Don, 344090, Russia
| | - Maria B Lukyanova
- Institute of Physical and Organic Chemistry, Southern Federal University, Stachki Prosp., 194/2, Rostov-On-Don, 344090, Russia
| | - Islam M El-Sewify
- Institute of Physical and Organic Chemistry, Southern Federal University, Stachki Prosp., 194/2, Rostov-On-Don, 344090, Russia.,Department of Chemistry, Faculty of Science, Ain Shams University, Cairo, Egypt
| | - Boris S Lukyanov
- Institute of Physical and Organic Chemistry, Southern Federal University, Stachki Prosp., 194/2, Rostov-On-Don, 344090, Russia
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2
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Mendive‐Tapia L, Mendive‐Tapia D, Zhao C, Gordon D, Benson S, Bromley MJ, Wang W, Wu J, Kopp A, Ackermann L, Vendrell M. Rationales Design von Phe-BODIPY-Aminosäuren als fluorogene Bausteine für den peptidbasierten Nachweis von Candida-Infektionen im Harntrakt. ANGEWANDTE CHEMIE (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2022; 134:e202117218. [PMID: 38505242 PMCID: PMC10946803 DOI: 10.1002/ange.202117218] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/16/2021] [Indexed: 11/08/2022]
Abstract
AbstractPilzinfektionen, die durch Candida‐Arten verursacht werden, gehören zu den häufigsten Infektionen bei Krankenhauspatienten. Die derzeitigen Methoden zum Nachweis von Candida‐Pilzzellen in klinischen Proben beruhen jedoch auf zeitaufwändigen Analysen, die eine schnelle und zuverlässige Diagnose erschweren. In diesem Beitrag beschreiben wir die rationale Entwicklung neuer Phe‐BODIPY‐Aminosäuren als kleine fluorogene Bausteine und ihre Anwendung zur Erzeugung fluoreszierender antimikrobieller Peptide für die schnelle Markierung von Candida‐Zellen im Urin. Mit Hilfe von computergestützten Berechnungen haben wir das fluorogene Verhalten von BODIPY‐substituierten aromatischen Aminosäuren analysiert und Bioaktivitäts‐ und konfokale Mikroskopieexperimente bei verschiedenen Stämmen durchgeführt, um den Nutzen und die Vielseitigkeit von Peptiden mit Phe‐BODIPYs zu bestätigen. Schließlich haben wir einen einfachen und sensitiven fluoreszensbasierten Test zum Nachweis von Candida albicans in menschlichen Urinproben entwickelt.
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Affiliation(s)
- Lorena Mendive‐Tapia
- Zentrum für EntzündungsforschungDie Universität von EdinburghEH16 4TJEdinburghGroßbritannien
| | - David Mendive‐Tapia
- Abteilung Theoretische ChemiePhysikalisch-Chemisches InstitutUniversität Heidelberg69120HeidelbergDeutschland
| | - Can Zhao
- Manchester Fungal Infection GroupAbteilung für EvolutionInfektion und GenomikM139NTManchesterGroßbritannien
| | - Doireann Gordon
- Zentrum für EntzündungsforschungDie Universität von EdinburghEH16 4TJEdinburghGroßbritannien
| | - Sam Benson
- Zentrum für EntzündungsforschungDie Universität von EdinburghEH16 4TJEdinburghGroßbritannien
| | - Michael J. Bromley
- Manchester Fungal Infection GroupAbteilung für EvolutionInfektion und GenomikM139NTManchesterGroßbritannien
| | - Wei Wang
- Institut für Organische und Biomolekulare ChemieGeorg-August-Universität37077GöttingenDeutschland
| | - Jun Wu
- Institut für Organische und Biomolekulare ChemieGeorg-August-Universität37077GöttingenDeutschland
| | - Adelina Kopp
- Institut für Organische und Biomolekulare ChemieGeorg-August-Universität37077GöttingenDeutschland
| | - Lutz Ackermann
- Institut für Organische und Biomolekulare ChemieGeorg-August-Universität37077GöttingenDeutschland
| | - Marc Vendrell
- Zentrum für EntzündungsforschungDie Universität von EdinburghEH16 4TJEdinburghGroßbritannien
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3
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Mendive‐Tapia L, Mendive‐Tapia D, Zhao C, Gordon D, Benson S, Bromley MJ, Wang W, Wu J, Kopp A, Ackermann L, Vendrell M. Rational Design of Phe‐BODIPY Amino Acids as Fluorogenic Building Blocks for Peptide‐Based Detection of Urinary Tract
Candida
Infections. Angew Chem Int Ed Engl 2022; 61:e202117218. [PMID: 35075763 PMCID: PMC9305947 DOI: 10.1002/anie.202117218] [Citation(s) in RCA: 14] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2021] [Indexed: 12/11/2022]
Abstract
Fungal infections caused by Candida species are among the most prevalent in hospitalized patients. However, current methods for the detection of Candida fungal cells in clinical samples rely on time‐consuming assays that hamper rapid and reliable diagnosis. Herein, we describe the rational development of new Phe‐BODIPY amino acids as small fluorogenic building blocks and their application to generate fluorescent antimicrobial peptides for rapid labelling of Candida cells in urine. We have used computational methods to analyse the fluorogenic behaviour of BODIPY‐substituted aromatic amino acids and performed bioactivity and confocal microscopy experiments in different strains to confirm the utility and versatility of peptides incorporating Phe‐BODIPYs. Finally, we have designed a simple and sensitive fluorescence‐based assay for the detection of Candida albicans in human urine samples.
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Affiliation(s)
- Lorena Mendive‐Tapia
- Centre for Inflammation Research The University of Edinburgh EH16 4TJ Edinburgh UK
| | - David Mendive‐Tapia
- Department Theoretische Chemie Physikalisch-Chemisches Institut Universität Heidelberg 69120 Heidelberg Germany
| | - Can Zhao
- Manchester Fungal Infection Group Division of Evolution Infection and Genomics University of Manchester M139NT Manchester UK
| | - Doireann Gordon
- Centre for Inflammation Research The University of Edinburgh EH16 4TJ Edinburgh UK
| | - Sam Benson
- Centre for Inflammation Research The University of Edinburgh EH16 4TJ Edinburgh UK
| | - Michael J. Bromley
- Manchester Fungal Infection Group Division of Evolution Infection and Genomics University of Manchester M139NT Manchester UK
| | - Wei Wang
- Institut für Organische und Biomolekulare Chemie Georg-August-Universität 37077 Göttingen Germany
| | - Jun Wu
- Institut für Organische und Biomolekulare Chemie Georg-August-Universität 37077 Göttingen Germany
| | - Adelina Kopp
- Institut für Organische und Biomolekulare Chemie Georg-August-Universität 37077 Göttingen Germany
| | - Lutz Ackermann
- Institut für Organische und Biomolekulare Chemie Georg-August-Universität 37077 Göttingen Germany
| | - Marc Vendrell
- Centre for Inflammation Research The University of Edinburgh EH16 4TJ Edinburgh UK
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4
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Steen JD, Duijnstee DR, Sardjan AS, Martinelli J, Kortekaas L, Jacquemin D, Browne WR. Electrochemical Ring-Opening and -Closing of a Spiropyran. J Phys Chem A 2021; 125:3355-3361. [PMID: 33861596 PMCID: PMC8154606 DOI: 10.1021/acs.jpca.1c01142] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
![]()
The bistability of
molecular switches is an essential characteristic
in their use as functional components in molecular-based devices and
machines. For photoswitches, light-driven switching between two stable
states proceeds via short-lived changes of the bond order in electronically
excited states. Here, bistable switching of a ditertbutyl-substituted
spiropyran photoswitch is instead demonstrated by oxidation and subsequent
reduction in an overall four-state cycle. The spiropyran structure
chosen has reduced sensitivity to the effect of secondary electrochemical
processes such as H+ production and provides transient
access to a decreased thermal Z–E isomerization barrier in the one electron oxidized state, akin to
that achieved in the corresponding photochemical path. Thus, we show
that the energy needed for switching spiropyrans to the merocyanine
form on demand, typically delivered by a photon, can instead be provided
electrochemically. This opens up further opportunities for the utilization
of spiropyrans in electrically controlled applications and devices.
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Affiliation(s)
- Jorn D Steen
- Molecular Inorganic Chemistry, Stratingh Institute for Chemistry, Faculty of Science and Engineering, University of Groningen, Nijenborgh 4, 9747 AG Groningen, The Netherlands
| | - Daniël R Duijnstee
- Molecular Inorganic Chemistry, Stratingh Institute for Chemistry, Faculty of Science and Engineering, University of Groningen, Nijenborgh 4, 9747 AG Groningen, The Netherlands
| | - Andy S Sardjan
- Molecular Inorganic Chemistry, Stratingh Institute for Chemistry, Faculty of Science and Engineering, University of Groningen, Nijenborgh 4, 9747 AG Groningen, The Netherlands
| | - Jacopo Martinelli
- Molecular Inorganic Chemistry, Stratingh Institute for Chemistry, Faculty of Science and Engineering, University of Groningen, Nijenborgh 4, 9747 AG Groningen, The Netherlands
| | - Luuk Kortekaas
- Molecular Inorganic Chemistry, Stratingh Institute for Chemistry, Faculty of Science and Engineering, University of Groningen, Nijenborgh 4, 9747 AG Groningen, The Netherlands
| | - Denis Jacquemin
- Université de Nantes, CEISAM UMR 6230, CNRS, F-44000 Nantes, France
| | - Wesley R Browne
- Molecular Inorganic Chemistry, Stratingh Institute for Chemistry, Faculty of Science and Engineering, University of Groningen, Nijenborgh 4, 9747 AG Groningen, The Netherlands
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5
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Sowa JK, Weiss EA, Seideman T. Photoisomerization-coupled electron transfer. J Chem Phys 2020; 153:034301. [PMID: 32716166 DOI: 10.1063/5.0013468] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Photochromic molecular structures constitute a unique platform for constructing molecular switches, sensors, and memory devices. One of their most promising applications is as light-switchable electron acceptor or donor units. Here, we investigate a previously unexplored process that we postulate may occur in such systems: an ultrafast electron transfer triggered by a simultaneous photoisomerization of the donor or the acceptor moiety. We propose a theoretical model for this phenomenon and, with the aid of density functional theory calculations, apply it to the case of a dihydropyrene-type photochromic molecular donor. By considering the wavepacket dynamics and the photoisomerization yield, we show that the two processes involved, electron transfer and photoisomerization, are in general inseparable and need to be treated in a unified manner. We finish by discussing how the efficiency of photoisomerization-coupled electron transfer can be controlled experimentally.
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Affiliation(s)
- Jakub K Sowa
- Department of Chemistry, Northwestern University, Evanston, Illinois 60208, USA
| | - Emily A Weiss
- Department of Chemistry, Northwestern University, Evanston, Illinois 60208, USA
| | - Tamar Seideman
- Department of Chemistry, Northwestern University, Evanston, Illinois 60208, USA
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6
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Zhang YH, Sun XW, Zhang TS, Liu XY, Cui G. Nonadiabatic Dynamics Simulations on Early-Time Photochemistry of Spirobenzopyran. J Phys Chem A 2020; 124:2547-2559. [PMID: 32187492 DOI: 10.1021/acs.jpca.0c00791] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
Photoinduced ring-opening, decay, and isomerization of spirobenzopyran have been explored by the OM2/MRCI nonadiabatic dynamics simulations based on Tully's fewest-switches surface hopping scheme. The efficient S1 to S0 internal conversion as observed in experiments is attributed to the existence of two efficient excited-state decay pathways. The first one is related to the C-N dissociation, and the second one is done to the C-O dissociation. The C-O dissociation pathway is dominant, and more than 90% trajectories decay to the S0 state via the C-O bond-fission related S1/S0 conical intersections. Near these regions in the S0 state, trajectories can either return to spirobenzopyran or proceed to various intermediates including merocyanine via a series of bond rotations. Our nonadiabatic dynamics simulations also demonstrate that the hydrogen-out-of-plane (HOOP) motion is important for efficient and ultrafast excited-state deactivation. On the other hand, we have also found that the replacement of methyl groups by hydrogen atoms in spirobenzopyran can artificially introduce different intramolecular hydrogen transfers leading to hydrogen-transferred intermediates. This finding is important for the community and demonstrates that such a kind of structural truncation, sometimes, could be problematic, leading to incorrect photodynamics. Our present work provides valuable insights into the photodynamics of spirobenzopyran, which could be helpful for the design of spiropyran-based photochromic materials.
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Affiliation(s)
- Ya-Hui Zhang
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education, College of Chemistry, Beijing Normal University, Beijing, 100875, China
| | - Xin-Wei Sun
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education, College of Chemistry, Beijing Normal University, Beijing, 100875, China
| | - Teng-Shuo Zhang
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education, College of Chemistry, Beijing Normal University, Beijing, 100875, China
| | - Xiang-Yang Liu
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education, College of Chemistry, Beijing Normal University, Beijing, 100875, China
| | - Ganglong Cui
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education, College of Chemistry, Beijing Normal University, Beijing, 100875, China
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7
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Kortekaas L, Chen J, Jacquemin D, Browne WR. Proton-Stabilized Photochemically Reversible E/ Z Isomerization of Spiropyrans. J Phys Chem B 2018; 122:6423-6430. [PMID: 29847129 PMCID: PMC6150689 DOI: 10.1021/acs.jpcb.8b03528] [Citation(s) in RCA: 54] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
Spiropyrans undergo Cspiro-O bond breaking to their ring-open protonated E-merocyanine form upon protonation and irradiation via an intermediate protonated Z-merocyanine isomer. We show that the extent of acid-induced ring opening is controlled by matching both the concentration and strength of the acid used and with strong acids full ring opening to the Z-merocyanine isomer occurs spontaneously allowing its characterization by 1H NMR spectroscopy as well as UV/vis spectroscopy, and reversible switching between Z/ E-isomerization by irradiation with UV and visible light. Under sufficiently acidic conditions, both E- and Z-isomers are thermally stable. Judicious choice of acid such that its p Ka lies between that of the E- and Z-merocyanine forms enables thermally stable switching between spiropyran and E-merocyanine forms and hence pH gating between thermally irreversible and reversible photochromic switching.
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Affiliation(s)
- L Kortekaas
- Molecular Inorganic Chemistry, Stratingh Institute for Chemistry, Faculty of Mathematics and Natural Sciences , University of Groningen , Nijenborgh 4 , 9747AG Groningen , The Netherlands
| | - J Chen
- Molecular Inorganic Chemistry, Stratingh Institute for Chemistry, Faculty of Mathematics and Natural Sciences , University of Groningen , Nijenborgh 4 , 9747AG Groningen , The Netherlands
| | - D Jacquemin
- Chimie Et Interdisciplinarité, Synthèse, Analyse, Modélisation (CEISAM) , UMR CNRS no. 6230, Université de Nantes , BP 92208, 2, Rue de la Houssinière , 44322 Nantes Cedex 3, France
| | - W R Browne
- Molecular Inorganic Chemistry, Stratingh Institute for Chemistry, Faculty of Mathematics and Natural Sciences , University of Groningen , Nijenborgh 4 , 9747AG Groningen , The Netherlands
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8
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Xia Z, Guo X, Zhu Y, Wang Y, Wang J. A julolidine-fused anthracene derivative: synthesis, photophysical properties, and oxidative dimerization. RSC Adv 2018; 8:13588-13591. [PMID: 35542525 PMCID: PMC9079783 DOI: 10.1039/c8ra02205d] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2018] [Accepted: 04/03/2018] [Indexed: 11/21/2022] Open
Abstract
We describe the synthesis and characterization of a julolidine-fused anthracene derivative J-A, which exhibits a maximum absorption of 450 nm and a maximum emission of 518 nm. The fluorescent quantum yield was determined to be 0.55 in toluene. J-A dimerizes in solution via oxidative coupling. Structure of the dimer was characterized using single crystal X-ray diffraction. A julolidine fused anthracene derivative with unique photophysical and redox properties was presented.![]()
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Affiliation(s)
- Zeming Xia
- School of Chemistry
- Sun Yat-Sen University
- Guangzhou 510275
- People's Republic of China
| | - Xiaoyu Guo
- School of Chemistry
- Sun Yat-Sen University
- Guangzhou 510275
- People's Republic of China
| | - Yanpeng Zhu
- School of Chemistry
- Sun Yat-Sen University
- Guangzhou 510275
- People's Republic of China
| | - Yonggen Wang
- School of Chemistry
- Sun Yat-Sen University
- Guangzhou 510275
- People's Republic of China
| | - Jiaobing Wang
- School of Chemistry
- Sun Yat-Sen University
- Guangzhou 510275
- People's Republic of China
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9
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Mendive-Tapia D, Mangaud E, Firmino T, de la Lande A, Desouter-Lecomte M, Meyer HD, Gatti F. Multidimensional Quantum Mechanical Modeling of Electron Transfer and Electronic Coherence in Plant Cryptochromes: The Role of Initial Bath Conditions. J Phys Chem B 2017; 122:126-136. [DOI: 10.1021/acs.jpcb.7b10412] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- David Mendive-Tapia
- Institut
Charles Gerhardt Montpellier, UMR 5253, CNRS-UM-ENSCM, CTMM, Université Montpellier, CC 15001, Place Eugène Bataillon, 34095 Montpellier, France
- Theoretische
Chemie, Physikalisch-Chemisches Institut, Universität Heidelberg, INF 229, D-69120 Heidelberg, Germany
| | - Etienne Mangaud
- Laboratoire
Collisions Agrégats Réactivité, UMR 5589, IRSAMC, Université Toulouse III Paul Sabatier, F-31062 Toulouse, France
| | - Thiago Firmino
- Laboratoire
de Chimie Physique, CNRS, Université Paris-Sud, Université Paris Saclay, Orsay F-91405, France
| | - Aurélien de la Lande
- Laboratoire
de Chimie Physique, CNRS, Université Paris-Sud, Université Paris Saclay, Orsay F-91405, France
| | - Michèle Desouter-Lecomte
- Laboratoire
de Chimie Physique, CNRS, Université Paris-Sud, Université Paris Saclay, Orsay F-91405, France
| | - Hans-Dieter Meyer
- Theoretische
Chemie, Physikalisch-Chemisches Institut, Universität Heidelberg, INF 229, D-69120 Heidelberg, Germany
| | - Fabien Gatti
- Institut
des Sciences Moléculaires d’Orsay, UMR-CNRS 8214, Université Paris-Sud, Université Paris Saclay, Orsay F-91405, France
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