1
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Gawinkowski S, Prakash O. Searching for correlations between geometric and spectroscopic parameters of intramolecular hydrogen bonds in porphyrin-like macrocycles. Phys Chem Chem Phys 2022; 24:22319-22329. [PMID: 36098255 DOI: 10.1039/d2cp01195f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Chemical bond lengths and angles are characteristic structural parameters of a molecule. Similarly, the frequencies of the vibrational modes and the NMR chemical shifts are unique "chemical fingerprints" specific to a compound. These are the basic parameters describing newly obtained compounds and enabling their identification. Intramolecular hydrogen bonding significantly influences the physicochemical properties of macrocyclic compounds with a porphyrin-like structure. This work presents the verification for correlations between geometric and spectroscopic parameters related to hydrogen bonds in this type of macrocyclic compounds. In particular, such relationships were investigated for a large group of porphyrin, porphycene, and dibenzotetraaza[14]annulene derivatives and a group of other macrocycles with similar structure. A very strong linear correlation was found only between the vibrational frequencies of the NH groups involved in a hydrogen bond and the length of this bond, which applied to all macrocyclic compounds of this type. Several other relationships were found between spectroscopic (IR, Raman, NMR) and geometric (X-ray) parameters, highlighting differences and similarities between different families of macrocycles. Apart from providing a better understanding of the nature of hydrogen bonds and their characteristics in porphyrin-like macrocyclic compounds, these relationships will facilitate the identification of new macrocycles and the extrapolation of their spectroscopic properties.
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Affiliation(s)
- Sylwester Gawinkowski
- Institute of Physical Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland.
| | - Om Prakash
- Institute of Physical Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland.
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2
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Nagamaiah J, Dutta A, Pati NN, Sahoo S, Soman R, Panda PK. 3,6,13,16-Tetrapropylporphycene: Rational Synthesis, Complexation, and Halogenation. J Org Chem 2022; 87:2721-2729. [DOI: 10.1021/acs.joc.1c02652] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
| | - Arnab Dutta
- School of Chemistry, University of Hyderabad, Hyderabad 500046, India
| | | | - Sameeta Sahoo
- School of Chemistry, University of Hyderabad, Hyderabad 500046, India
| | - Rahul Soman
- School of Chemistry, University of Hyderabad, Hyderabad 500046, India
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3
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Sahoo S, Panda PK. β,β′-fusion induced unique out-of-plane platinum(II) complexation in porphycene. Inorganica Chim Acta 2022. [DOI: 10.1016/j.ica.2021.120679] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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4
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Jodukathula N, Dutta A, Sahoo SS, Sahoo S, Panda P. 3,6,13,16-Tetraalkylporphycenes: Synthesis and Exploration of Effect of Alkyl Groups on Structure, Photophysical Properties, and Basicity. NEW J CHEM 2022. [DOI: 10.1039/d2nj01550a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Two new 3,6,13,16-tetraalkylporphycenes were synthesized following rational approach. The reason behind lower yield of the desired β,β'-bipyrroles was unraveled. The σ-donating effect of alkyl-substituents was more profound than reported positional...
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5
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Listkowski A, Masiera N, Kijak M, Luboradzki R, Leśniewska B, Waluk J. Controlling Emissive Properties by Intramolecular Hydrogen Bonds: Alkyl and Aryl meso-Substituted Porphycenes. Chemistry 2021; 27:6324-6333. [PMID: 33561303 DOI: 10.1002/chem.202005440] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2020] [Revised: 01/22/2021] [Indexed: 01/09/2023]
Abstract
Porphycene, a porphyrin isomer, is an efficient fluorophore. However, four-fold meso substitution with alkyl groups decreases the fluorescence quantum yield by orders of magnitude. For aryl substituents, this effect is small. To explain this difference, we have synthesized and studied a mixed aryl-alkyl-substituted compound, 9,20-diphenyl-10,19-dimethylporphycene, as well as the 9,20-diphenyl and 9,20-dimethyl derivatives. Analysis of the structural, spectroscopic, and photophysical data of the six porphycenes, combined with quantum chemical calculations, shows a clear correlation between the strength of the intramolecular NH⋅⋅⋅N hydrogen bonds and the efficiency of the radiationless depopulation of the lowest-excited singlet state. This result led us to propose a model in which the delocalization of the inner protons in the cavity of the macrocycle is responsible for the nonradiative deactivation channel. The applicability of the model is confirmed by the literature data for other alkyl- or aryl-substituted porphycenes. The finding of a correlation between structural and emissive characteristics enables a rational design of porphycenes with desired photophysical properties.
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Affiliation(s)
- Arkadiusz Listkowski
- Institute of Physical Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224, Warsaw, Poland.,Faculty of Mathematics and Science, Cardinal Stefan Wyszyński University, Dewajtis 5, 01-815, Warsaw, Poland
| | - Natalia Masiera
- Institute of Physical Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224, Warsaw, Poland
| | - Michał Kijak
- Institute of Physical Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224, Warsaw, Poland
| | - Roman Luboradzki
- Institute of Physical Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224, Warsaw, Poland
| | - Barbara Leśniewska
- Institute of Physical Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224, Warsaw, Poland
| | - Jacek Waluk
- Institute of Physical Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224, Warsaw, Poland.,Faculty of Mathematics and Science, Cardinal Stefan Wyszyński University, Dewajtis 5, 01-815, Warsaw, Poland
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6
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Liu W, Yang S, Li J, Su G, Ren J. One molecule, two states: Single molecular switch on metallic electrodes. WIRES COMPUTATIONAL MOLECULAR SCIENCE 2020. [DOI: 10.1002/wcms.1511] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Wei Liu
- Nano and Heterogeneous Materials Center, School of Materials Science and Engineering Nanjing University of Science and Technology Nanjing China
| | - Sha Yang
- Nano and Heterogeneous Materials Center, School of Materials Science and Engineering Nanjing University of Science and Technology Nanjing China
| | - Jingtai Li
- Nano and Heterogeneous Materials Center, School of Materials Science and Engineering Nanjing University of Science and Technology Nanjing China
| | - Guirong Su
- Nano and Heterogeneous Materials Center, School of Materials Science and Engineering Nanjing University of Science and Technology Nanjing China
| | - Ji‐Chang Ren
- Nano and Heterogeneous Materials Center, School of Materials Science and Engineering Nanjing University of Science and Technology Nanjing China
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7
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Listkowski A, Kharchenko A, Ciąćka P, Kijak M, Masiera N, Rybakiewicz R, Luboradzki R, Fita P, Waluk J. Fluorinated Porphycenes: Synthesis, Spectroscopy, Photophysics, and Tautomerism. Chempluschem 2020; 85:2197-2206. [DOI: 10.1002/cplu.202000517] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2020] [Revised: 09/08/2020] [Indexed: 11/05/2022]
Affiliation(s)
- Arkadiusz Listkowski
- Institute of Physical Chemistry Polish Academy of Sciences Kasprzaka 44 01-224 Warsaw Poland
- Faculty of Mathematics and Natural Sciences College of Science Cardinal Stefan Wyszyński University Dewajtis 5 01-815 Warsaw Poland
| | - Anastasiia Kharchenko
- Institute of Physical Chemistry Polish Academy of Sciences Kasprzaka 44 01-224 Warsaw Poland
| | - Piotr Ciąćka
- Institute of Experimental Physics Faculty of Physics University of Warsaw Pasteura 5 02-093 Warsaw Poland
- Institute of Physical Chemistry Polish Academy of Sciences Kasprzaka 44 01-224 Warsaw Poland
| | - Michał Kijak
- Institute of Physical Chemistry Polish Academy of Sciences Kasprzaka 44 01-224 Warsaw Poland
| | - Natalia Masiera
- Institute of Physical Chemistry Polish Academy of Sciences Kasprzaka 44 01-224 Warsaw Poland
| | - Renata Rybakiewicz
- Faculty of Mathematics and Natural Sciences College of Science Cardinal Stefan Wyszyński University Dewajtis 5 01-815 Warsaw Poland
| | - Roman Luboradzki
- Institute of Physical Chemistry Polish Academy of Sciences Kasprzaka 44 01-224 Warsaw Poland
| | - Piotr Fita
- Institute of Experimental Physics Faculty of Physics University of Warsaw Pasteura 5 02-093 Warsaw Poland
| | - Jacek Waluk
- Institute of Physical Chemistry Polish Academy of Sciences Kasprzaka 44 01-224 Warsaw Poland
- Faculty of Mathematics and Natural Sciences College of Science Cardinal Stefan Wyszyński University Dewajtis 5 01-815 Warsaw Poland
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8
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Rana A, Sathish Kumar B, Panda PK. 3,6,13,16-Tetrasubstituted Porphycene: The Missing Link in Porphycene Chemistry. Org Lett 2020; 22:7175-7180. [PMID: 32852214 DOI: 10.1021/acs.orglett.0c02494] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
We have introduced the first 3,6,13,16-tetrasubstituted porphycene as its tetramethoxy analogue. This substitution pattern is one of the most general patterns yet missing in this isomeric porphyrin chemistry. This porphycene exhibits intense fluorescence along with the ability to coordinate with divalent metal ions; in particular, it forms the first stable Zn(II) complex among the tetrasubstituted porphycenes. Notably, the molecular structure of Zn1•Py displays supramolecular chirality.
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9
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Kijak M, Nawara K, Listkowski A, Masiera N, Buczyńska J, Urbańska N, Orzanowska G, Pietraszkiewicz M, Waluk J. 2 + 2 Can Make Nearly a Thousand! Comparison of Di- and Tetra- Meso-Alkyl-Substituted Porphycenes. J Phys Chem A 2020; 124:4594-4604. [PMID: 32423205 PMCID: PMC7590974 DOI: 10.1021/acs.jpca.0c02155] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Two porphycenes, substituted at the meso positions with two and four methyl groups, respectively, reveal similar absorption spectra, but their photophysical properties are completely different. 9,20-dimethylporphycene emits fluorescence with about 20% quantum yield, independent of the solvent. In contrast, fluorescence of 9,10,19,20-tetramethylporphycene is extremely weak in nonviscous solvents, but it can be recovered by placing the chromophore in a rigid environment. We propose a model that explains these differences, based on calculations and structural analogies with other extremely weakly emitting derivatives, dibenzo[cde,mno]porphycenes. The efficient S1 deactivation involves delocalization of two inner cavity protons coupled with proton translocation toward a high-energy cis tautomer. The latter process leads to distortion from planarity. The probability of deactivation increases with the strength of the intramolecular NH···N hydrogen bonds. The model also explains the observation of biexponential fluorescence decay in weakly emitting porphycenes. It can be extended to other derivatives, in particular, the asymmetrically substituted ones. We also point to the possibility of using specific porphycenes as viscosity sensors, in particular, when working in single molecule regime.
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Affiliation(s)
- Michał Kijak
- Institute of Physical Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland
| | - Krzysztof Nawara
- Institute of Physical Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland.,Faculty of Mathematics and Science, Cardinal Stefan Wyszyński University, Dewajtis 5, 01-815 Warsaw, Poland
| | - Arkadiusz Listkowski
- Institute of Physical Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland.,Faculty of Mathematics and Science, Cardinal Stefan Wyszyński University, Dewajtis 5, 01-815 Warsaw, Poland
| | - Natalia Masiera
- Institute of Physical Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland
| | - Joanna Buczyńska
- Institute of Physical Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland
| | - Natalia Urbańska
- Institute of Physical Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland
| | - Grażyna Orzanowska
- Institute of Physical Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland
| | - Marek Pietraszkiewicz
- Institute of Physical Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland
| | - Jacek Waluk
- Institute of Physical Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland.,Faculty of Mathematics and Science, Cardinal Stefan Wyszyński University, Dewajtis 5, 01-815 Warsaw, Poland
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10
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Litman Y, Behler J, Rossi M. Temperature dependence of the vibrational spectrum of porphycene: a qualitative failure of classical-nuclei molecular dynamics. Faraday Discuss 2020; 221:526-546. [DOI: 10.1039/c9fd00056a] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Abstract
Approximate quantum dynamics succeed in predicting a temperature-dependent blue-shift of the high-frequency stretch bands that arise from vibrational coupling between low-frequency thermally activated modes and high-frequency quantized ones. Classical nuclei molecular dynamics fail and instead predict a red-shift.
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Affiliation(s)
- Yair Litman
- Fritz Haber Institute of the Max Planck Society
- 14195 Berlin
- Germany
| | - Jörg Behler
- Universität Göttingen
- Institut für Physikalische Chemie, Theoretische Chemie
- 37077 Göttingen
- Germany
| | - Mariana Rossi
- Fritz Haber Institute of the Max Planck Society
- 14195 Berlin
- Germany
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11
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Kasprzycki P, Kopycki P, Listkowski A, Gorski A, Radzewicz C, Birch DJS, Waluk J, Fita P. Influence of local microenvironment on the double hydrogen transfer in porphycene. Phys Chem Chem Phys 2020; 22:17117-17128. [PMID: 32687131 DOI: 10.1039/d0cp02687e] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We performed time-resolved transient absorption and fluorescence anisotropy measurements in order to study tautomerization of porphycene in rigid polymer matrices at cryogenic temperatures. Studies were carried out in poly(methyl methacrylate) (PMMA), poly(vinyl butyral) (PVB), and poly(vinyl alcohol) (PVA). The results prove that in all studied media hydrogen tunnelling plays a significant role in the double hydrogen transfer which becomes very sensitive to properties of the environment below approx. 150 K. We also demonstrate that there exist two populations of porphycene molecules in rigid media: "hydrogen-transferring" molecules, in which tautomerization occurs on time scales below 1 ns and "frozen" molecules in which double hydrogen transfer is too slow to be monitored with nanosecond techniques. The number of "frozen" molecules increases when the sample is cooled. We explain this effect by interactions of guest molecules with a rigid host matrix which disturbs symmetry of porphycene and hinders tunnelling. Temperature dependence of the number of hydrogen-transferring molecules suggests that the factor which restores the symmetry of the double-minimum potential well in porphycene are intermolecular vibrations localized in separated regions of the amorphous polymer.
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Affiliation(s)
- Piotr Kasprzycki
- Institute of Experimental Physics, Faculty of Physics, University of Warsaw, Pasteura 5, 02-093 Warsaw, Poland. and Institute of Physical Chemistry, Polish Academy of Sciences, 44/52 Kasprzaka, Warsaw 01-224, Poland.
| | - Przemysław Kopycki
- Institute of Experimental Physics, Faculty of Physics, University of Warsaw, Pasteura 5, 02-093 Warsaw, Poland.
| | - Arkadiusz Listkowski
- Institute of Physical Chemistry, Polish Academy of Sciences, 44/52 Kasprzaka, Warsaw 01-224, Poland. and Faculty of Mathematics and Science, Cardinal Stefan Wyszyński University, Dewajtis 5, 01-815 Warsaw, Poland
| | - Aleksander Gorski
- Institute of Physical Chemistry, Polish Academy of Sciences, 44/52 Kasprzaka, Warsaw 01-224, Poland.
| | - Czesław Radzewicz
- Institute of Experimental Physics, Faculty of Physics, University of Warsaw, Pasteura 5, 02-093 Warsaw, Poland.
| | - David J S Birch
- Photophysics Group, Centre for Molecular Nanometrology, Department of Physics, Scottish Universities Physics Alliance, University of Strathclyde, 107 Rottenrow East, Glasgow G4 0NG, UK
| | - Jacek Waluk
- Institute of Physical Chemistry, Polish Academy of Sciences, 44/52 Kasprzaka, Warsaw 01-224, Poland. and Faculty of Mathematics and Science, Cardinal Stefan Wyszyński University, Dewajtis 5, 01-815 Warsaw, Poland
| | - Piotr Fita
- Institute of Experimental Physics, Faculty of Physics, University of Warsaw, Pasteura 5, 02-093 Warsaw, Poland.
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12
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Litman Y, Richardson JO, Kumagai T, Rossi M. Elucidating the Nuclear Quantum Dynamics of Intramolecular Double Hydrogen Transfer in Porphycene. J Am Chem Soc 2019; 141:2526-2534. [PMID: 30648386 PMCID: PMC6728096 DOI: 10.1021/jacs.8b12471] [Citation(s) in RCA: 50] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Abstract
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We address the double hydrogen transfer
(DHT) dynamics of the porphycene molecule, a complex paradigmatic
system in which the making and breaking of H-bonds in a highly anharmonic
potential energy surface require a quantum mechanical treatment not
only of the electrons but also of the nuclei. We combine density functional
theory calculations, employing hybrid functionals and van der Waals
corrections, with recently proposed and optimized path-integral ring-polymer
methods for the approximation of quantum vibrational spectra and reaction
rates. Our full-dimensional ring-polymer instanton simulations show
that below 100 K the concerted DHT tunneling pathway dominates but
between 100 and 300 K there is a competition between concerted and
stepwise pathways when nuclear quantum effects are included. We obtain
ground-state reaction rates of 2.19 × 1011 s–1 at 150 K and 0.63 × 1011 s–1 at
100 K, in good agreement with experiment. We also reproduce the puzzling
N–H stretching band of porphycene with very good accuracy from
thermostated ring-polymer molecular dynamics simulations. The position
and line shape of this peak, centered at around 2600 cm–1 and spanning 750 cm–1, stem from a combination
of very strong H-bonds, the coupling to low-frequency modes, and the
access to cis-like isomeric conformations, which
cannot be appropriately captured with classical-nuclei dynamics. These
results verify the appropriateness of our general theoretical approach
and provide a framework for a deeper physical understanding of hydrogen
transfer dynamics in complex systems.
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Affiliation(s)
- Yair Litman
- Theory Department , Fritz Haber Institute of the Max Planck Society , Faradayweg 4-6 , 14195 Berlin , Germany
| | | | - Takashi Kumagai
- Physical Chemistry Department , Fritz Haber Institute of the Max Planck Society , Faradayweg 4-6 , 14195 Berlin , Germany
| | - Mariana Rossi
- Theory Department , Fritz Haber Institute of the Max Planck Society , Faradayweg 4-6 , 14195 Berlin , Germany
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13
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Peukert S, Kijak M, Ostapko J, Sepioł J, Le Bris C, Zehnacker-Rentien A, Gil M, Waluk J. Supersonic jet spectroscopy of parent hemiporphycene: Structural assignment and vibrational analysis for S 0 and S 1 electronic states. J Chem Phys 2018; 149:134307. [PMID: 30292190 DOI: 10.1063/1.5048843] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023] Open
Abstract
Hemiporphycene (HPc), a constitutional isomer of porphyrin, is studied under supersonic expansion conditions by means of laser-induced fluorescence, visible-visible hole-burning experiments, single vibronic level fluorescence techniques, and quantum chemical calculations. Only one trans form of jet-cooled HPc is observed, in contrast to solution studies that evidence a mixture of two trans tautomeric forms separated in energy by ∼1 kcal/mol. Reliable structural assignment is provided by simulating absorption and emission patterns at the density functional theory and time-dependent density functional theory levels of theory. The vibronic spectra are nicely reproduced for both electronic ground and lowest excited singlet states for the most stable trans form. In contrast to another porphyrin isomer, porphycene (Pc), no tunneling or photo-induced hydrogen transfer is detected. The lower symmetry of HPc compared with Pc and the concomitant non-equivalent positions of the inner-cavity nitrogen atoms result in a non-symmetric double minimum potential for tautomerization, larger energy barrier, and a longer tunneling distance, with the average intramolecular hydrogen bond length larger in HPc than in Pc. HPc readily forms hydrates that show red-shifted absorption relative to the bare molecule.
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Affiliation(s)
- Sebastian Peukert
- Institute of Physical Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland
| | - Michał Kijak
- Institute of Physical Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland
| | - Jakub Ostapko
- Institute of Physical Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland
| | - Jerzy Sepioł
- Institute of Physical Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland
| | - Catherine Le Bris
- CNRS, Institut des Sciences Moléculaires d'Orsay (ISMO), Orsay, France
| | | | - Michał Gil
- Institute of Physical Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland
| | - Jacek Waluk
- Institute of Physical Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland
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14
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Liu S, Baugh D, Motobayashi K, Zhao X, Levchenko SV, Gawinkowski S, Waluk J, Grill L, Persson M, Kumagai T. Anharmonicity in a double hydrogen transfer reaction studied in a single porphycene molecule on a Cu(110) surface. Phys Chem Chem Phys 2018; 20:12112-12119. [PMID: 29676424 DOI: 10.1039/c8cp00178b] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
Anharmonicity plays a crucial role in hydrogen transfer reactions in hydrogen-bonding systems, which leads to a peculiar spectral line shape of the hydrogen stretching mode as well as highly complex intra/intermolecular vibrational energy relaxation. Single-molecule study with a well-defined model is necessary to elucidate a fundamental mechanism. Recent low-temperature scanning tunnelling microscopy (STM) experiments revealed that the cis↔cis tautomerization in a single porphycene molecule on Cu(110) at 5 K can be induced by vibrational excitation via an inelastic electron tunnelling process and the N-H(D) stretching mode couples with the tautomerization coordinate [Kumagai et al. Phys. Rev. Lett. 2013, 111, 246101]. Here we discuss a pronounced anharmonicity of the N-H stretching mode observed in the STM action spectra and the conductance spectra. Density functional theory calculations find a strong intermode coupling of the N-H stretching with an in-plane bending mode within porphycene on Cu(110).
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Affiliation(s)
- S Liu
- Department of Physical Chemistry, Fritz-Haber Institute of the Max-Planck Society, Faradayweg 4-6, 14195 Berlin, Germany.
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15
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16
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Kumagai T, Ladenthin JN, Litman Y, Rossi M, Grill L, Gawinkowski S, Waluk J, Persson M. Quantum tunneling in real space: Tautomerization of single porphycene molecules on the (111) surface of Cu, Ag, and Au. J Chem Phys 2018; 148:102330. [DOI: 10.1063/1.5004602] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Takashi Kumagai
- Department of Physical Chemistry, Fritz-Haber Institute of the Max-Planck Society, Faradayweg 4-6, 14195 Berlin, Germany
| | - Janina N. Ladenthin
- Department of Physical Chemistry, Fritz-Haber Institute of the Max-Planck Society, Faradayweg 4-6, 14195 Berlin, Germany
| | - Yair Litman
- Theory Department, Fritz-Haber Institute of the Max-Planck Society, Faradayweg 4-6, 14195 Berlin, Germany
| | - Mariana Rossi
- Theory Department, Fritz-Haber Institute of the Max-Planck Society, Faradayweg 4-6, 14195 Berlin, Germany
| | - Leonhard Grill
- Department of Physical Chemistry, University of Graz, Heinrichstrasse 28, 8010 Graz, Austria
| | - Sylwester Gawinkowski
- Institute of Physical Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, Warsaw 01-224, Poland
| | - Jacek Waluk
- Institute of Physical Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, Warsaw 01-224, Poland
- Faculty of Mathematics and Natural Sciences, College of Science, Cardinal Stefan Wyszyński University, Dewajtis 5, 01-815 Warsaw, Poland
| | - Mats Persson
- Surface Science Research Centre and Department of Chemistry, University of Liverpool, Liverpool L69 3BX, United Kingdom
- Department of Physics, Chalmers University of Technology, SE 41296 Göteborg, Sweden
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17
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Jaekel S, Richter A, Lindner R, Bechstein R, Nacci C, Hecht S, Kühnle A, Grill L. Reversible and Efficient Light-Induced Molecular Switching on an Insulator Surface. ACS NANO 2018; 12:1821-1828. [PMID: 29316393 DOI: 10.1021/acsnano.7b08624] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
Prototypical molecular switches such as azobenzenes exhibit two states, i.e., trans and cis, with different characteristic physical properties. In recent years various derivatives were investigated on metallic surfaces. However, bulk insulators as supporting substrate reveal important advantages since they allow electronic decoupling from the environment, which is key to control the switching properties. Here, we report on the light-induced isomerization of an azobenzene derivative on a bulk insulator surface, in this case calcite (101̅4), studied by atomic force microscopy with submolecular resolution. Surprisingly, cis isomers appear on the surface already directly after preparation, indicating kinetic trapping. The photoisomerization process is reversible, as the use of different light sources results in specific molecular assemblies of each isomer. The process turns out to be very efficient and even comparable to molecules in solution, which we assign to the rather weak molecular interaction with the insulator surface, in contrast to metals.
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Affiliation(s)
- Simon Jaekel
- Department of Physical Chemistry, University of Graz , Heinrichstrasse 28, Graz 8010, Austria
| | - Antje Richter
- Department of Physical Chemistry, University of Mainz , Duesbergweg 10-14, Mainz 55122, Germany
| | - Robert Lindner
- Department of Physical Chemistry, University of Mainz , Duesbergweg 10-14, Mainz 55122, Germany
| | - Ralf Bechstein
- Department of Physical Chemistry, University of Mainz , Duesbergweg 10-14, Mainz 55122, Germany
| | - Christophe Nacci
- Department of Physical Chemistry, University of Graz , Heinrichstrasse 28, Graz 8010, Austria
| | - Stefan Hecht
- Department of Chemistry, Humboldt-Universität zu Berlin , Brook-Taylor-Straße 2, Berlin 10099, Germany
| | - Angelika Kühnle
- Department of Physical Chemistry, University of Mainz , Duesbergweg 10-14, Mainz 55122, Germany
| | - Leonhard Grill
- Department of Physical Chemistry, University of Graz , Heinrichstrasse 28, Graz 8010, Austria
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18
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Kim V, Piatkowski L, Pszona M, Jäger R, Ostapko J, Sepioł J, Meixner AJ, Waluk J. Unusual effects in single molecule tautomerization: hemiporphycene. Phys Chem Chem Phys 2018; 20:26591-26596. [DOI: 10.1039/c8cp05836a] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Temporal evolution of the fluorescence spectra of individual hemiporphycene molecules reveals unusual double hydrogen transfer reaction dynamics.
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Affiliation(s)
- Victoriya Kim
- Institute of Physical and Theoretical Chemistry and LISA+
- University of Tübingen
- D-72076 Tübingen
- Germany
| | | | - Maria Pszona
- Institute of Physical Chemistry
- Polish Academy of Sciences
- Poland
| | - Regina Jäger
- Institute of Physical and Theoretical Chemistry and LISA+
- University of Tübingen
- D-72076 Tübingen
- Germany
| | - Jakub Ostapko
- Institute of Physical Chemistry
- Polish Academy of Sciences
- Poland
| | - Jerzy Sepioł
- Institute of Physical Chemistry
- Polish Academy of Sciences
- Poland
| | - Alfred J. Meixner
- Institute of Physical and Theoretical Chemistry and LISA+
- University of Tübingen
- D-72076 Tübingen
- Germany
| | - Jacek Waluk
- Institute of Physical Chemistry
- Polish Academy of Sciences
- Poland
- Faculty of Mathematics and Science
- Cardinal Stefan Wyszyński University
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Koch M, Pagan M, Persson M, Gawinkowski S, Waluk J, Kumagai T. Direct Observation of Double Hydrogen Transfer via Quantum Tunneling in a Single Porphycene Molecule on a Ag(110) Surface. J Am Chem Soc 2017; 139:12681-12687. [DOI: 10.1021/jacs.7b06905] [Citation(s) in RCA: 43] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Affiliation(s)
- Matthias Koch
- Department
of Physical Chemistry, Fritz-Haber Institute of the Max-Planck Society, Faradayweg 4-6, Berlin 14195, Germany
| | - Mark Pagan
- Surface
Science Research Centre and Department of Chemistry, University of Liverpool, Liverpool L69 3BX, United Kingdom
| | - Mats Persson
- Surface
Science Research Centre and Department of Chemistry, University of Liverpool, Liverpool L69 3BX, United Kingdom
| | - Sylwester Gawinkowski
- Institute
of Physical Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, Warsaw 01-224, Poland
| | - Jacek Waluk
- Institute
of Physical Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, Warsaw 01-224, Poland
- Faculty
of Mathematics and Natural Sciences, College of Science, Cardinal Stefan Wyszyński University, Dewajtis 5, Warsaw 01-815, Poland
| | - Takashi Kumagai
- Department
of Physical Chemistry, Fritz-Haber Institute of the Max-Planck Society, Faradayweg 4-6, Berlin 14195, Germany
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