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Yao L, An H, Zhou S, Kim A, Luijten E, Chen Q. Seeking regularity from irregularity: unveiling the synthesis-nanomorphology relationships of heterogeneous nanomaterials using unsupervised machine learning. NANOSCALE 2022; 14:16479-16489. [PMID: 36285804 DOI: 10.1039/d2nr03712b] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
Abstract
Nanoscale morphology of functional materials determines their chemical and physical properties. However, despite increasing use of transmission electron microscopy (TEM) to directly image nanomorphology, it remains challenging to quantify the information embedded in TEM data sets, and to use nanomorphology to link synthesis and processing conditions to properties. We develop an automated, descriptor-free analysis workflow for TEM data that utilizes convolutional neural networks and unsupervised learning to quantify and classify nanomorphology, and thereby reveal synthesis-nanomorphology relationships in three different systems. While TEM records nanomorphology readily in two-dimensional (2D) images or three-dimensional (3D) tomograms, we advance the analysis of these images by identifying and applying a universal shape fingerprint function to characterize nanomorphology. After dimensionality reduction through principal component analysis, this function then serves as the input for morphology grouping through unsupervised learning. We demonstrate the wide applicability of our workflow to both 2D and 3D TEM data sets, and to both inorganic and organic nanomaterials, including tetrahedral gold nanoparticles mixed with irregularly shaped impurities, hybrid polymer-patched gold nanoprisms, and polyamide membranes with irregular and heterogeneous 3D crumple structures. In each of these systems, unsupervised nanomorphology grouping identifies both the diversity and the similarity of the nanomaterial across different synthesis conditions, revealing how synthetic parameters guide nanomorphology development. Our work opens possibilities for enhancing synthesis of nanomaterials through artificial intelligence and for understanding and controlling complex nanomorphology, both for 2D systems and in the far less explored case of 3D structures, such as those with embedded voids or hidden interfaces.
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Affiliation(s)
- Lehan Yao
- Department of Materials Science and Engineering, University of Illinois, Urbana, IL 61801, USA.
| | - Hyosung An
- Department of Materials Science and Engineering, University of Illinois, Urbana, IL 61801, USA.
- Department of Petrochemical Materials Engineering, Chonnam National University, Yeosu, 59631, Korea
| | - Shan Zhou
- Department of Materials Science and Engineering, University of Illinois, Urbana, IL 61801, USA.
| | - Ahyoung Kim
- Department of Materials Science and Engineering, University of Illinois, Urbana, IL 61801, USA.
| | - Erik Luijten
- Department of Materials Science and Engineering, Northwestern University, Evanston, IL 60208, USA
- Department of Engineering Sciences and Applied Mathematics, Northwestern University, Evanston, IL 60208, USA
- Department of Chemistry, Northwestern University, Evanston, IL 60208, USA
- Department of Physics and Astronomy, Northwestern University, Evanston, IL 60208, USA
| | - Qian Chen
- Department of Materials Science and Engineering, University of Illinois, Urbana, IL 61801, USA.
- Department of Chemistry, University of Illinois, Urbana, IL 61801, USA
- Materials Research Laboratory, University of Illinois, Urbana, IL 61801, USA
- Beckman Institute for Advanced Science and Technology, University of Illinois, Urbana, IL 61801, USA
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Kalyuzhnyi YV, Nezbeda I, Cummings PT. Integral equation theory for a mixture of spherical and patchy colloids: analytical description. SOFT MATTER 2020; 16:3456-3465. [PMID: 32201867 DOI: 10.1039/c9sm02309g] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
An analytic theory for the structure and thermodynamics of two-component mixtures of patchy and spherical colloids is developed. The theory is based on an analytical solution of the multidensity Ornstein-Zernike equation supplemented by the associative Percus-Yevick closure relations. We derive closed-form analytic expressions for the partial structure factors and thermodynamic properties using the energy route for the model with arbitrary number of patches and any hard-sphere size ratio of the particles. To assess the accuracy of the theoretical predictions we compare them against existing and newly generated set of computer simulation data. In our numerical calculations we consider the model with equal hard-sphere sizes and one patch. Very good agreement between results of the theory and simulation for the pair correlation functions, excess internal energy and pressure is observed for almost all values of the system density, temperature and composition studied. Only in the region of low concentrations of spherical colloids the theoretical results become less accurate.
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Affiliation(s)
- Yurij V Kalyuzhnyi
- Institute for Condensed Matter Physics of the National Academy of Sciences of Ukraine, 1 Svientsitskii St., Lviv 79011, Ukraine.
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Geigenfeind T, Dias CS, Telo da Gama MM, de Las Heras D, Araújo NAM. Crossover from three- to six-fold symmetry of colloidal aggregates in circular traps. SOFT MATTER 2018; 14:9411-9417. [PMID: 30421777 DOI: 10.1039/c8sm01867g] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
At sufficiently low temperatures and high densities, repulsive spherical particles in two-dimensions (2d) form close-packed structures with six-fold symmetry. By contrast, when the interparticle interaction has an attractive anisotropic component, the structure may exhibit the symmetry of the interaction. We consider a suspension of spherical particles interacting through an isotropic repulsive potential and a three-fold symmetric attractive interaction, confined in circular potential traps in 2d. We find that, due to the competition between the interparticle and the external potentials, the particles self-organize into structures with three- or six-fold symmetry, depending on the width of the traps. For intermediate trap widths, a core-shell structure is formed, where the core has six-fold symmetry and the shell is three-fold symmetric. When the width of the trap changes periodically in time, the symmetry of the colloidal structure also changes, but it does not necessarily follow that of the corresponding static trap.
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Affiliation(s)
- T Geigenfeind
- Theoretische Physik II, Physikalisches Institut, Universität Bayreuth, D-95440 Bayreuth, Germany
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Prestipino S, Munaò G, Costa D, Pellicane G, Caccamo C. Two-dimensional mixture of amphiphilic dimers and spheres: Self-assembly behaviour. J Chem Phys 2018; 147:144902. [PMID: 29031271 DOI: 10.1063/1.4995549] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023] Open
Abstract
The emergence of supramolecular aggregates from simple microscopic interaction rules is a fascinating feature of complex fluids which, besides its fundamental interest, has potential applications in many areas, from biological self-assembly to smart material design. We here investigate by Monte Carlo simulation the equilibrium structure of a two-dimensional mixture of asymmetric dimers and spheres (disks). Dimers and disks are hard particles, with an additional short-range attraction between a disk and the smaller monomer of a dimer. The model parameters and thermodynamic conditions probed are typical of colloidal fluid mixtures. In spite of the minimalistic character of the interaction, we observe-upon varying the relative concentration and size of the two colloidal species-a rich inventory of mesoscale structures at low temperature, such as clusters, lamellæ (i.e., polymer-like chains), and gel-like networks. For colloidal species of similar size and near equimolar concentrations, a dilute fluid of clusters gives way to floating lamellæ upon cooling; at higher densities, the lamellæ percolate through the simulation box, giving rise to an extended network. A crystal-vapour phase-separation may occur for a mixture of dimers and much larger disks. Finally, when the fluid is brought in contact with a planar wall, further structures are obtained at the interface, from layers to branched patterns, depending on the nature of wall-particle interactions.
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Affiliation(s)
- Santi Prestipino
- Dipartimento di Scienze Matematiche e Informatiche, Scienze Fisiche e Scienze della Terra,Università degli Studi di Messina, Viale F. Stagno d'Alcontres 31, 98166 Messina, Italy
| | - Gianmarco Munaò
- Dipartimento di Scienze Matematiche e Informatiche, Scienze Fisiche e Scienze della Terra,Università degli Studi di Messina, Viale F. Stagno d'Alcontres 31, 98166 Messina, Italy
| | - Dino Costa
- Dipartimento di Scienze Matematiche e Informatiche, Scienze Fisiche e Scienze della Terra,Università degli Studi di Messina, Viale F. Stagno d'Alcontres 31, 98166 Messina, Italy
| | - Giuseppe Pellicane
- School of Chemistry and Physics, University of Kwazulu-Natal, Private Bag X01, Scottsville 3209, Pietermaritzburg, South Africa
| | - Carlo Caccamo
- Dipartimento di Scienze Matematiche e Informatiche, Scienze Fisiche e Scienze della Terra,Università degli Studi di Messina, Viale F. Stagno d'Alcontres 31, 98166 Messina, Italy
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Prestipino S, Munaò G, Costa D, Caccamo C. Self-assembly in a model colloidal mixture of dimers and spherical particles. J Chem Phys 2018; 146:084902. [PMID: 28249437 DOI: 10.1063/1.4976704] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022] Open
Abstract
We investigate the structure of a dilute mixture of amphiphilic dimers and spherical particles, a model relevant to the problem of encapsulating globular "guest" molecules in a dispersion. Dimers and spheres are taken to be hard particles, with an additional attraction between spheres and the smaller monomers in a dimer. Using the Monte Carlo simulation, we document the low-temperature formation of aggregates of guests (clusters) held together by dimers, whose typical size and shape depend on the guest concentration χ. For low χ (less than 10%), most guests are isolated and coated with a layer of dimers. As χ progressively increases, clusters grow in size becoming more and more elongated and polydisperse; after reaching a shallow maximum for χ≈50%, the size of clusters again reduces upon increasing χ further. In one case only (χ=50% and moderately low temperature) the mixture relaxed to a fluid of lamellae, suggesting that in this case clusters are metastable with respect to crystal-vapor separation. On heating, clusters shrink until eventually the system becomes homogeneous on all scales. On the other hand, as the mixture is made denser and denser at low temperature, clusters get increasingly larger until a percolating network is formed.
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Affiliation(s)
- Santi Prestipino
- Dipartimento di Scienze Matematiche ed Informatiche, Scienze Fisiche e Scienze della Terra, Università degli Studi di Messina, Viale F. Stagno d'Alcontres 31, 98166 Messina, Italy
| | - Gianmarco Munaò
- Dipartimento di Scienze Matematiche ed Informatiche, Scienze Fisiche e Scienze della Terra, Università degli Studi di Messina, Viale F. Stagno d'Alcontres 31, 98166 Messina, Italy
| | - Dino Costa
- Dipartimento di Scienze Matematiche ed Informatiche, Scienze Fisiche e Scienze della Terra, Università degli Studi di Messina, Viale F. Stagno d'Alcontres 31, 98166 Messina, Italy
| | - Carlo Caccamo
- Dipartimento di Scienze Matematiche ed Informatiche, Scienze Fisiche e Scienze della Terra, Università degli Studi di Messina, Viale F. Stagno d'Alcontres 31, 98166 Messina, Italy
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Treffenstädt LL, Araújo NAM, de Las Heras D. Percolation of functionalized colloids on patterned substrates. SOFT MATTER 2018; 14:3572-3580. [PMID: 29683174 DOI: 10.1039/c8sm00406d] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
We study the percolation properties for a system of functionalized colloids on patterned substrates via Monte Carlo simulations. The colloidal particles are modeled as hard disks with three equally-distributed attractive patches on their perimeter. We describe the patterns on the substrate as circular potential wells of radius Rp arranged in a regular square or hexagonal lattice. We find a nonmonotonic behavior of the percolation threshold (packing fraction) as a function of Rp. For attractive wells, the percolation threshold is higher than the one for clean (non-patterned) substrates if the circular wells are non-overlapping and can only be lower if the wells overlap. For repulsive wells we find the opposite behavior. In addition, at high packing fractions the formation of both structural and bond defects suppress percolation. As a result, the percolation diagram is reentrant with the non-percolated state occurring at very low and intermediate densities.
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Affiliation(s)
- Lucas L Treffenstädt
- Theoretische Physik II, Physikalisches Institut, Universität Bayreuth, D-95440 Bayreuth, Germany.
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Munaò G, Costa D, Prestipino S, Caccamo C. Aggregation of colloidal spheres mediated by Janus dimers: A Monte Carlo study. Colloids Surf A Physicochem Eng Asp 2017. [DOI: 10.1016/j.colsurfa.2017.04.054] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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