A dissipative particle dynamics study of a flexible filament in confined shear flow

The dynamics of a healthy and infected red blood cell in flow through constricted channels: A DPD simulation

Understanding the dynamics of red blood cell (RBC) motion under in silico conditions is central to the development of cost-effective diagnostic tools. Specifically, unraveling the relationship between the rheological properties and the nature of shape change in the RBC (healthy or infected) can be extremely useful. In case of malarial infection, RBC progressively loses its deformability and tends to occlude the microvessel. In the present study, detailed mesoscopic simulations are performed to investigate the deformation dynamics of an RBC in flow through a constricted channel. Specifically, the manifestation of viscous forces (through flow rates) on the passage and blockage characteristics of a healthy red blood cell (hRBC) vis-á-vis an infected red blood cell (iRBC) are investigated. A finite-sized dissipative particle dynamics framework is used to model plasma in conjunction with a discrete model for the RBC. Instantaneous wall boundary method was used to model no-slip wall boundary conditions with a good control on the near-wall density fluctuations and compressibility effects. To investigate the microvascular occlusion, the RBC motion through 2 types of constricted channels, viz, (1) a tapered microchannel and (2) a stenosed-type microchannel, were simulated. It was observed that the deformation of an infected cell was much less compared with a healthy cell, with an attendant increase in the passage time. Apart from the qualitative features, deformation indices were obtained. The deformation of hRBC was sudden, while the iRBC deformed slowly as it traversed through the constriction. For higher flow rates, both hRBC and iRBC were found to undergo severe deformation. Even under low flow rates, hRBC could easily traverse past the constricted channel. However, for sufficiently slow flow rates (eg, capillary flows), the microchannel was found to be completely blocked by the iRBC.

Dissipative particle dynamics study of phase separation in binary fluid mixtures in periodic and confined domains

We investigate the phase separation behavior of binary mixtures in two-dimensional periodic and confined domains using dissipative particle dynamics. Two canonical problems of fluid mechanics are considered for the confined domains: square cavity with no-slip walls and lid-driven cavity with one driven wall. The dynamics is studied for both weakly and strongly separating mixtures and different area fractions. The phase separation process is analyzed using the structure factor and the total interface length. The dynamics of phase separation in the square cavity and lid-driven cavity are observed to be significantly slower when compared to the dynamics in the periodic domain. The presence of the no-slip walls and the inertial effects significantly influences the separation dynamics. Finally, we show that the growth exponent for the strongly separating case is invariant to changes in the inter-species repulsion parameter.