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Zhang Y, Chen L, Yang J, Zhang Y, Yuan MS. An "OR-AND" logic gate based multifunctional colorimetric sensor for the discrimination of Pb 2+ and Cd 2. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2020; 232:118163. [PMID: 32106032 DOI: 10.1016/j.saa.2020.118163] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/27/2019] [Revised: 02/11/2020] [Accepted: 02/16/2020] [Indexed: 06/10/2023]
Abstract
Pb2+ and Cd2+ are the most ubiquitous heavy metal ion pollutants, and they have aroused much attention due to their irreversible and significant damage to human organ. In this work, a new fluorescein-based "OR-AND" logic gate colorimetric probe 3',6'-bis((tert-butyldiphenylsilyl)oxy)-2-(2-((2-hydroxyphenyl)imino)ethylidene)aminspiro[isoindoline-1,9'-xanthen]-3-one (FP) was designed and synthesized via attaching 2-(2-((2-hydroxyphenyl)imino)ethylidene)amino and tert-butyldiphenylsilyl to fluorescein as the specific identification groups. This sensor can rapidly and sensitively discriminate Pb2+ and Cd2+ by utilizing F- as an auxiliary reagent. When Pb2+ or Cd2+ was added into the FP solution, the absorption band at 533 nm increased and the peak at 374 nm decreased, the color changed from colorless to pale-purple, resulting in a ratiometric spectral change. However, adding fluoride ion to the FP solution containing Pb2+ or Cd2+ resulted in a distinct phenomenon in which the pale purple color fades out to colorless for a Pb2+-containing solution and deepen to dark purple for a Cd2+-containing solution, which is attributable to the different coordination mechanisms. In aqueous solution, the detection limits of FP can reach 0.42 μM for Pb2+ and 0.53 μM for Cd2+. The probe exhibited rapid responses for these analytes. Moreover, FP was successfully used to rapidly detect trace amounts of hazardous Pb2+ and Cd2+ in tap water with good relative recovery and the relative standard deviations (RSD) were 1.8% for Pb2+ and 0.3% for Cd2+, providing a novel approach for detecting Pb2+ and Cd2+ in practical application.
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Affiliation(s)
- Yufeng Zhang
- College of Chemistry & Pharmacy, Northwest A&F University, Yangling, Shaanxi 712100, PR China
| | - Long Chen
- College of Chemistry & Pharmacy, Northwest A&F University, Yangling, Shaanxi 712100, PR China
| | - Jiao Yang
- College of Chemistry & Pharmacy, Northwest A&F University, Yangling, Shaanxi 712100, PR China
| | - Yanrong Zhang
- College of Chemistry & Pharmacy, Northwest A&F University, Yangling, Shaanxi 712100, PR China
| | - Mao-Sen Yuan
- College of Chemistry & Pharmacy, Northwest A&F University, Yangling, Shaanxi 712100, PR China; State Key Laboratory of Crystal Materials, Shandong University, Jinan 250100, China.
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2
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Kanagaraj K, Xiao C, Rao M, Fan C, Borovkov V, Cheng G, Zhou D, Zhong Z, Su D, Yu X, Yao J, Hao T, Wu W, Chruma JJ, Yang C. A Quinoline-Appended Cyclodextrin Derivative as a Highly Selective Receptor and Colorimetric Probe for Nucleotides. iScience 2020; 23:100927. [PMID: 32169819 PMCID: PMC7066246 DOI: 10.1016/j.isci.2020.100927] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2019] [Revised: 01/18/2020] [Accepted: 02/13/2020] [Indexed: 01/03/2023] Open
Abstract
The design and development of specific recognition and sensing systems for biologically important anionic species has received growing attention in recent years, as they play significant roles in biology, pharmacy, and environmental sciences. Herein, a new supramolecular sensing probe L1 was developed for highly selective differentiation of nucleotides. L1 displayed extremely marked absorption and emission differentiation upon binding with nucleotide homologs of AMP, ADP, and ATP, due to the divergent spatial orientations of guests upon binding, which allowed for a naked-eye colorimetric differentiation for nucleotides. A differentiating mechanism was unambiguously rationalized by using various spectroscopic studies and theoretical calculations. Furthermore, we successfully demonstrated that L1 can be applied to the real-time monitoring of the enzyme-catalyzed phosphorylation/dephosphorylation processes and thus demonstrated an unprecedented visualizable strategy for selectively differentiating the structurally similar nucleotides and real-time monitoring of biological processes via fluorescent and colorimetric changes.
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Affiliation(s)
- Kuppusamy Kanagaraj
- Key Laboratory of Green Chemistry & Technology, College of Chemistry, State Key Laboratory of Biotherapy, West China Medical Center, and Healthy Food Evaluation Research Center, Sichuan University, Chengdu 610064, China
| | - Chao Xiao
- Key Laboratory of Green Chemistry & Technology, College of Chemistry, State Key Laboratory of Biotherapy, West China Medical Center, and Healthy Food Evaluation Research Center, Sichuan University, Chengdu 610064, China
| | - Ming Rao
- Key Laboratory of Green Chemistry & Technology, College of Chemistry, State Key Laboratory of Biotherapy, West China Medical Center, and Healthy Food Evaluation Research Center, Sichuan University, Chengdu 610064, China
| | - Chunying Fan
- Key Laboratory of Green Chemistry & Technology, College of Chemistry, State Key Laboratory of Biotherapy, West China Medical Center, and Healthy Food Evaluation Research Center, Sichuan University, Chengdu 610064, China
| | - Victor Borovkov
- College of Chemistry and Materials Science, South-Central University for Nationalities, Wuhan 430074, China.
| | - Guo Cheng
- Key Laboratory of Green Chemistry & Technology, College of Chemistry, State Key Laboratory of Biotherapy, West China Medical Center, and Healthy Food Evaluation Research Center, Sichuan University, Chengdu 610064, China
| | - Dayang Zhou
- Comprehensive Analysis Center, ISIR, Osaka University, Japan
| | - Zhihui Zhong
- Key Laboratory of Green Chemistry & Technology, College of Chemistry, State Key Laboratory of Biotherapy, West China Medical Center, and Healthy Food Evaluation Research Center, Sichuan University, Chengdu 610064, China
| | - Dan Su
- Key Laboratory of Green Chemistry & Technology, College of Chemistry, State Key Laboratory of Biotherapy, West China Medical Center, and Healthy Food Evaluation Research Center, Sichuan University, Chengdu 610064, China
| | - Xingke Yu
- Key Laboratory of Green Chemistry & Technology, College of Chemistry, State Key Laboratory of Biotherapy, West China Medical Center, and Healthy Food Evaluation Research Center, Sichuan University, Chengdu 610064, China
| | - Jiabin Yao
- Key Laboratory of Green Chemistry & Technology, College of Chemistry, State Key Laboratory of Biotherapy, West China Medical Center, and Healthy Food Evaluation Research Center, Sichuan University, Chengdu 610064, China
| | - Taotao Hao
- Key Laboratory of Green Chemistry & Technology, College of Chemistry, State Key Laboratory of Biotherapy, West China Medical Center, and Healthy Food Evaluation Research Center, Sichuan University, Chengdu 610064, China
| | - Wanhua Wu
- Key Laboratory of Green Chemistry & Technology, College of Chemistry, State Key Laboratory of Biotherapy, West China Medical Center, and Healthy Food Evaluation Research Center, Sichuan University, Chengdu 610064, China.
| | - Jason J Chruma
- Key Laboratory of Green Chemistry & Technology, College of Chemistry, State Key Laboratory of Biotherapy, West China Medical Center, and Healthy Food Evaluation Research Center, Sichuan University, Chengdu 610064, China
| | - Cheng Yang
- Key Laboratory of Green Chemistry & Technology, College of Chemistry, State Key Laboratory of Biotherapy, West China Medical Center, and Healthy Food Evaluation Research Center, Sichuan University, Chengdu 610064, China.
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3
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Li W, Gong X, Fan X, Yin S, Su D, Zhang X, Yuan L. Recent advances in molecular fluorescent probes for organic phosphate biomolecules recognition. CHINESE CHEM LETT 2019. [DOI: 10.1016/j.cclet.2019.07.056] [Citation(s) in RCA: 42] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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4
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Oshchepkov AS, Shumilova TA, Zerson M, Magerle R, Khrustalev VN, Kataev EA. Conformational Selection in Anion Recognition: cGMP-Selective Binding by a Naphthalimide-Functionalized Amido-Amine Macrocycle. J Org Chem 2019; 84:9034-9043. [PMID: 31117577 DOI: 10.1021/acs.joc.9b00947] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
Amido-amine macrocycles with two and four naphthalimide dyes were designed to bind nucleoside monophosphates and oligonucleotides in an aqueous buffered solution. Anion-templated synthesis was used to direct the macrocyclization reaction to the [2+2] product, while high dilution conditions favored the formation of the [4+4] macrocycle with an unprecedented geometry, as revealed from the X-ray analysis. The [2+2] product was found to exhibit a remarkable binding strength and fluorescence response for cyclic guanosine monophosphate (cGMP) in an aqueous solution. To our knowledge, this is the first synthetic receptor for cGMP, which also demonstrates a high preference to bind guanine-rich sequences accomplished by a strong fluorescence quenching. The receptor conformation is very sensitive to the guest structure in an aqueous solution, thus modeling the adaptive behavior of proteins. The study of synthetic systems with a detectable conformational equilibrium represents a great potential for understanding highly specific and tightly regulated interactions in biological systems.
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Affiliation(s)
- Aleksandr S Oshchepkov
- Faculty of Natural Sciences , Technische Universität Chemnitz , Chemnitz 09107 , Germany.,Peoples' Friendship University of Russia (RUDN University) , Moscow 117198 , Russia
| | - Tatiana A Shumilova
- Faculty of Natural Sciences , Technische Universität Chemnitz , Chemnitz 09107 , Germany
| | - Mario Zerson
- Faculty of Natural Sciences , Technische Universität Chemnitz , Chemnitz 09107 , Germany
| | - Robert Magerle
- Faculty of Natural Sciences , Technische Universität Chemnitz , Chemnitz 09107 , Germany
| | - Victor N Khrustalev
- Peoples' Friendship University of Russia (RUDN University) , Moscow 117198 , Russia.,National Research Center (Kurchatov Institute) , Moscow 123098 , Russia
| | - Evgeny A Kataev
- Faculty of Natural Sciences , Technische Universität Chemnitz , Chemnitz 09107 , Germany
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5
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Zhang J, Zhang J, Yan Z, Xie J. Recent Progress in Fluorescent Probes for Adenosine Triphosphate Based on Small Organic Molecules. CHINESE J ORG CHEM 2019. [DOI: 10.6023/cjoc201905024] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
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6
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Kundu S, Sarkar HS, Das S, Sahoo P. Easy and rapid estimation of ammonia in cold-storage potatoes: precautions in the environment. NEW J CHEM 2019. [DOI: 10.1039/c9nj00954j] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Carbazole–fluorescein-based imine (CFI) has been developed as a first chemosensor for selective detection and quantification of ammonia in cold-storage potatoes.
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Affiliation(s)
- Shampa Kundu
- Department of Chemistry
- Visva-Bharati University
- Santiniketan
- India
| | - Himadri Sekhar Sarkar
- Institute of Multidisciplinary Research for Advanced Materials (IMRAM) 2-1-1 Katahira
- Aoba-ku
- Sendai 980-8577
- Japan
| | - Sujoy Das
- Department of Chemistry
- Visva-Bharati University
- Santiniketan
- India
| | - Prithidipa Sahoo
- Department of Chemistry
- Visva-Bharati University
- Santiniketan
- India
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7
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Das S, Mukherjee U, Pal S, Maitra S, Sahoo P. Selective sensing of Al3+ ions by nitrophenyl induced coordination: imaging in zebrafish brain tissue. Org Biomol Chem 2019; 17:5230-5233. [DOI: 10.1039/c9ob00460b] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A selective sensing of Al3+ ions by nitrophenyl induced coordination has been developed and applied for the detection of Al3+ in the brain tissue of zebrafish.
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Affiliation(s)
- Sujoy Das
- Department of Chemistry
- Visva-Bharati University
- Santiniketan
- India
| | - Urmi Mukherjee
- Department of Zoology
- Visva-Bharati University
- Santiniketan
- India
| | - Soumojit Pal
- Department of Zoology
- Visva-Bharati University
- Santiniketan
- India
| | - Sudipta Maitra
- Department of Zoology
- Visva-Bharati University
- Santiniketan
- India
| | - Prithidipa Sahoo
- Department of Chemistry
- Visva-Bharati University
- Santiniketan
- India
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8
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Agafontsev AM, Ravi A, Shumilova TA, Oshchepkov AS, Kataev EA. Molecular Receptors for Recognition and Sensing of Nucleotides. Chemistry 2018; 25:2684-2694. [PMID: 30289184 DOI: 10.1002/chem.201802978] [Citation(s) in RCA: 34] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2018] [Revised: 10/05/2018] [Indexed: 12/15/2022]
Abstract
Nucleotides are constituents of nucleic acids and they have a variety of functions in cellular metabolism. Synthetic receptors and sensors are required to reveal the role of nucleotides in living organisms and mechanisms of signal transduction events. In recent years, a large number of nucleotide-selective synthetic receptors have been devised, which utilize different molecular designs and sensing mechanisms. This Minireview presents recent progress in the design of synthetic molecular receptors for selective recognition of nucleotides in aqueous solution. The binding properties of receptors and the origins of their selectivity for a particular nucleotide are discussed.
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Affiliation(s)
- Aleksandr M Agafontsev
- Institute of Chemistry, Technische Universität Chemnitz, 09107, Chemnitz, Germany.,N. N. Vorozhtsov Institute of Organic Chemistry SB RAS, 9 Lavrentiev Avenue, 630090, Novosibirsk, Russia.,Novosibirsk State University, Pirogova St. 1, 630090, Novosibirsk, Russia
| | - Anil Ravi
- Institute of Chemistry, Technische Universität Chemnitz, 09107, Chemnitz, Germany
| | - Tatiana A Shumilova
- Institute of Chemistry, Technische Universität Chemnitz, 09107, Chemnitz, Germany
| | - Aleksandr S Oshchepkov
- Peoples' Friendship University of Russia (RUDN University), Miklukho-Maklay St. 6, Moscow, 117198, Russia
| | - Evgeny A Kataev
- Institute of Chemistry, Technische Universität Chemnitz, 09107, Chemnitz, Germany
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9
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Ghosh A, Das S, Sarkar HS, Kundu S, Sahoo P. Consumption of H 2S from Our Daily Diet: Determination by a Simple Chemosensing Method. ACS OMEGA 2018; 3:11617-11623. [PMID: 30320267 PMCID: PMC6173501 DOI: 10.1021/acsomega.8b01751] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/23/2018] [Accepted: 09/10/2018] [Indexed: 05/03/2023]
Abstract
A unique method has been developed for comparative analysis of H2S produced from food samples from our daily diet, both qualitatively and quantitatively. The selective detection of H2S has been executed by introducing a simple chemodosimeter (PN-N 3 ) that gives response on the basis of intramolecular charge transfer. UV-vis, fluorimetric, and NMR titrations were performed to demonstrate the sensing mechanism and electronic environment of PN-N 3 in the presence of H2S. Density functional theory calculations were performed to validate the mechanism of azide (PN-N 3 ) reduction to amine (PN-NH 2 ) by the strong reducing power of H2S. The potentiality of this chemosensing method is that it could be treated as a simple, less-time-consuming, and cost-effective method for determining H2S in biological samples in the nanomolar range.
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10
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Liu X, Hu M, Wang M, Song Y, Zhou N, He L, Zhang Z. Novel nanoarchitecture of Co-MOF-on-TPN-COF hybrid: Ultralowly sensitive bioplatform of electrochemical aptasensor toward ampicillin. Biosens Bioelectron 2018; 123:59-68. [PMID: 30312876 DOI: 10.1016/j.bios.2018.09.089] [Citation(s) in RCA: 101] [Impact Index Per Article: 16.8] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2018] [Revised: 09/18/2018] [Accepted: 09/27/2018] [Indexed: 11/17/2022]
Abstract
Owning to the misuse of the antibiotics in animal husbandry and agriculture, it is highly urgent to determine the quantification of antibiotics in biological systems by the simple, sensitive, and fast method. In this work, a novel nanoarchitecture of Co-based metal-organic frameworks (Co-MOF) and terephthalonitrile-based covalent organic framework (TPN-COF) was synthesized (represented by Co-MOF@TPN-COF), followed by the exploitation as the bioplatform of non-label aptasensor for detecting the most frequently used β-lactam antibiotics, ampicillin (AMP). The new porous hybrid material of Co-MOF@TPN-COF was synthesized by adding the as-prepared TPN-COF into the Co-MOF preparation system. The multilayered Co-MOF@TPN-COF nanosheets exhibit a high specific surface area (52.64 m2 g-1), nitrogen-rich groups and excellent electrochemical activity. As a result, large amounts of aptamer strands can be bound over the Co-MOF@TPN-COF nanosheets owning to the strong π-π stacking and hydrogen bonds. When detecting AMP by the electrochemical impedance spectroscopy, the fabricated Co-MOF@TPN-COF-based aptasensor exhibits an ultra-low detection limit of 0.217 fg mL-1 within the AMP concentration from 1.0 fg mL-1 to 2.0 ng mL-1, which was superior to those previously reported in literatures. In addition, this proposed aptasensor also shows high selectivity, good reproducibility and stability, acceptable regenerability, and favorable applicability in human serum, river water and milk. Therefore, the proposed Co-MOF@TPN-COF-based aptasensor has a great promise to be applied as a powerful tool in the fields of food safety.
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Affiliation(s)
- Xiaokang Liu
- Department of Orthopedics, The First Affiliated Hospital of Zhengzhou University, Zhengzhou 450000, PR China
| | - Mengyao Hu
- Henan Provincial Key Laboratory of Surface and Interface Science, Zhengzhou University of Light Industry, No. 136, Science Avenue, Zhengzhou 450001, PR China
| | - Minghua Wang
- Henan Provincial Key Laboratory of Surface and Interface Science, Zhengzhou University of Light Industry, No. 136, Science Avenue, Zhengzhou 450001, PR China
| | - Yingpan Song
- Henan Provincial Key Laboratory of Surface and Interface Science, Zhengzhou University of Light Industry, No. 136, Science Avenue, Zhengzhou 450001, PR China
| | - Nan Zhou
- Department of Orthopedics, The First Affiliated Hospital of Zhengzhou University, Zhengzhou 450000, PR China.
| | - Linghao He
- Henan Provincial Key Laboratory of Surface and Interface Science, Zhengzhou University of Light Industry, No. 136, Science Avenue, Zhengzhou 450001, PR China
| | - Zhihong Zhang
- Henan Provincial Key Laboratory of Surface and Interface Science, Zhengzhou University of Light Industry, No. 136, Science Avenue, Zhengzhou 450001, PR China.
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Sarkar HS, Das S, Rissanen K, Sahoo P. First Chemosensor for Selective Detection and Quantification of L-4-Hydroxyproline in Collagen and Other Bio Samples. Anal Chem 2017; 89:13054-13057. [PMID: 29183127 DOI: 10.1021/acs.analchem.7b04430] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Amino pyridine-based rhodamine conjugate (APR) has been developed as a first chemosensor for selective detection and quantification of L-4-Hydroxyproline (Hyp). The "turn-on" fluorescence property of the chemosensor makes it unique for easy estimation of Hyp in collagen and biological samples.
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Affiliation(s)
- Himadri Sekhar Sarkar
- Department of Chemistry, Visva-Bharati University , Santiniketan, 731235, West Bengal, India
| | - Sujoy Das
- Department of Chemistry, Visva-Bharati University , Santiniketan, 731235, West Bengal, India
| | - Kari Rissanen
- University of Jyvaskyla , Nanoscience Center, Department of Chemistry, Survontie 9 B, P.O. Box 35, 40014 Jyväskylä, Finland
| | - Prithidipa Sahoo
- Department of Chemistry, Visva-Bharati University , Santiniketan, 731235, West Bengal, India
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Sarkar HS, Das S, Mandal D, Uddin MR, Mandal S, Sahoo P. “Turn-on” fluorescence sensing of cytosine: development of a chemosensor for quantification of cytosine in human cancer cells. RSC Adv 2017. [DOI: 10.1039/c7ra11096k] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023] Open
Abstract
Pyrene appended 5-hydroxyisophthalic acid derivative (PIA) has been developed and characterized for selective detection and quantification of cytosine in different human cancer cells.
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Affiliation(s)
| | - Sujoy Das
- Department of Chemistry
- Visva-Bharati University
- India
| | - Debasish Mandal
- Institute of Chemistry
- The Hebrew University of Jerusalem
- 91904 Jerusalem
- Israel
| | - Md Raihan Uddin
- Department of Microbiology
- University of Calcutta
- Kolkata-700019
- India
| | - Sukhendu Mandal
- Department of Microbiology
- University of Calcutta
- Kolkata-700019
- India
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