1
|
O'Keeffe M, Treacy MMJ. Isogonal embeddings of interwoven and self-entangled honeycomb (hcb) nets and related interpenetrating primitive cubic (pcu) nets. Acta Crystallogr A Found Adv 2023; 79:560-569. [PMID: 37882210 DOI: 10.1107/s2053273323008495] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2023] [Accepted: 09/27/2023] [Indexed: 10/27/2023] Open
Abstract
Two- and three-periodic vertex-transitive (isogonal) piecewise-linear embeddings of self-entangled and interwoven honeycomb nets are described. The infinite families with trigonal symmetry and edge transitivity (isotoxal) are particularly interesting as they have the Borromean property that no two nets are directly linked. These also lead directly to infinite families of interpenetrating primitive cubic nets (pcu) that are also vertex- and edge-transitive and have embeddings with 90° angles between edges.
Collapse
Affiliation(s)
- Michael O'Keeffe
- School of Molecular Sciences, Arizona State University, Tempe, AZ 85287, USA
| | | |
Collapse
|
2
|
Jordan DN, Straßburg PG, Woschko D, Carrella LM, Cuignet LP, Eickmeier K, Dronskowski R, Garcia Y, Rentschler E, Janiak C. Interpenetration Phenomena via Anion Template Effects in Fe(II) and Co(II) Coordination Networks with a Bis-(1,2,4-triazole) Ligand. Polymers (Basel) 2023; 15:3286. [PMID: 37571180 PMCID: PMC10422438 DOI: 10.3390/polym15153286] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2023] [Revised: 07/30/2023] [Accepted: 07/31/2023] [Indexed: 08/13/2023] Open
Abstract
Seven new coordination networks, [Fe(tbbt)3](BF4)2 (1), [Co(tbbt)3](BF4)2 (2), [Fe(tbbt)3](ClO4)2 (3), [Co(tbbt)3](ClO4)2 (4), [Fe(NCS)2(tbbt)2] (5), [Co(NCS)2(tbbt)2] (6), and [Fe(H2O)2(tbbt)2]Br2·2H2O (7), were synthesized with the linker 1,1'-(trans-2-butene-1,4-diyl)bis-1,2,4-triazole (tbbt) and structurally investigated. The structure of complexes 1-4 is composed of three interpenetrating, symmetry-related 3D networks. Each individual 3D network forms a primitive, nearly cubic lattice (pcu) with BF4- or ClO4- anions present in the interstitial spaces. The structure of compounds 5 and 6 is composed of two-dimensional sql layers, which are parallel to each other in the AB stacking type. These layers are interpenetrated by one-dimensional chains, both having the same formula unit, [M(NCS)2(tbbt)2] (M = Fe, Co). The structure of compound 7 consists of parallel, two-dimensional sql layers in the ABCD stacking type. The interpenetration in 1-6 is not controlled by π-π-interactions between the triazole rings or C=C bonds, as could have been expected, but by (triazole)C-H⋯F4B, C-H⋯O4Cl, and C-H⋯SCN anion hydrogen bonds, which suggests a template effect of the respective non-coordinated or coordinated anion for the interpenetration. In 7, the (triazole)C-H⋯Br anion interactions are supplemented by O-H⋯O and O-H⋯Br hydrogen bonds involving the aqua ligand and crystal water molecules. It is evident that the coordinated and non-coordinated anions play an essential role in the formation of the networks and guide the interpenetration. All iron(II) coordination networks are colorless, off-white to yellow-orange, and have the metal ions in the high-spin state down to 77 K. Compound 5 stays in the high spin state even at temperatures down to 10 K.
Collapse
Affiliation(s)
- Dustin N. Jordan
- Institut für Anorganische Chemie und Strukturchemie, Heinrich-Heine-Universität, D-40204 Düsseldorf, Germany; (D.N.J.); (P.G.S.); (D.W.); (L.P.C.)
| | - Patrick G. Straßburg
- Institut für Anorganische Chemie und Strukturchemie, Heinrich-Heine-Universität, D-40204 Düsseldorf, Germany; (D.N.J.); (P.G.S.); (D.W.); (L.P.C.)
| | - Dennis Woschko
- Institut für Anorganische Chemie und Strukturchemie, Heinrich-Heine-Universität, D-40204 Düsseldorf, Germany; (D.N.J.); (P.G.S.); (D.W.); (L.P.C.)
| | - Luca M. Carrella
- Department of Chemistry, Johannes Gutenberg University Mainz, D-55128 Mainz, Germany; (L.M.C.); (E.R.)
| | - Laure P. Cuignet
- Institut für Anorganische Chemie und Strukturchemie, Heinrich-Heine-Universität, D-40204 Düsseldorf, Germany; (D.N.J.); (P.G.S.); (D.W.); (L.P.C.)
- Institute of Condensed Matter and Nanosciences, Molecular Chemistry, Materials and Catalysis (IMCN/MOST), Université Catholique de Louvain, 1348 Louvain-la-Neuve, Belgium;
| | - Katharina Eickmeier
- Institute of Inorganic Chemistry, RWTH Aachen University, D-52056 Aachen, Germany; (K.E.); (R.D.)
| | - Richard Dronskowski
- Institute of Inorganic Chemistry, RWTH Aachen University, D-52056 Aachen, Germany; (K.E.); (R.D.)
| | - Yann Garcia
- Institute of Condensed Matter and Nanosciences, Molecular Chemistry, Materials and Catalysis (IMCN/MOST), Université Catholique de Louvain, 1348 Louvain-la-Neuve, Belgium;
| | - Eva Rentschler
- Department of Chemistry, Johannes Gutenberg University Mainz, D-55128 Mainz, Germany; (L.M.C.); (E.R.)
| | - Christoph Janiak
- Institut für Anorganische Chemie und Strukturchemie, Heinrich-Heine-Universität, D-40204 Düsseldorf, Germany; (D.N.J.); (P.G.S.); (D.W.); (L.P.C.)
| |
Collapse
|
3
|
Self-Assembly of a Two-Dimensional Coordination Polymer Based on Silver and Lanthanide Tetrakis-Acylpyrazolonates: An Efficient New Strategy for Suppressing Ligand-to-Metal Charge Transfer Quenching of Europium Luminescence. Polymers (Basel) 2023; 15:polym15040867. [PMID: 36850151 PMCID: PMC9960442 DOI: 10.3390/polym15040867] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2023] [Revised: 02/02/2023] [Accepted: 02/07/2023] [Indexed: 02/12/2023] Open
Abstract
A new strategy for the easy polymerization of anionic [Ln(Qcy)4]- (HQcy-4-(cyclohexanecarbonyl)-5-methyl-2-phenyl-2,4-dihydro-3H-pyrazol-3-one) into two-dimensional layers of [AgLn(Qcy)4]n (Ln = Sm, Eu, Gd, Tb and Dy) is proposed by binding the single molecular anions [Ln(Qcy)4]- to silver cations through the coordination of the pyridinic nitrogen atoms of the pyrazolonate rings. The luminescent properties of [AgLn(Qcy)4]n have been studied in detail, and it was shown that the previously described low photoluminescence quantum yield (PLQY) of [Eu(Qcy)4]- is due to Ligand-To-Metal Charge Transfer (LMCT) quenching, which is effectively suppressed in the heterometallic [AgEu(Qcy)4]n polymer. Sensibilization coefficients for H3O[Eu(Qcy)4], [AgEu(Qcy)4]n, and H3O[Sm(Qcy)4] complexes (n ≈ 1) were estimated via theoretical analysis (also by using Judd-Ofelt theory for Sm3+) and PLQY measurements.
Collapse
|
4
|
Symmetric Tangling of Honeycomb Networks. Symmetry (Basel) 2022. [DOI: 10.3390/sym14091805] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
Abstract
Symmetric, elegantly entangled structures are a curious mathematical construction that has found their way into the heart of the chemistry lab and the toolbox of constructive geometry. Of particular interest are those structures—knots, links and weavings—which are composed locally of simple twisted strands and are globally symmetric. This paper considers the symmetric tangling of multiple 2-periodic honeycomb networks. We do this using a constructive methodology borrowing elements of graph theory, low-dimensional topology and geometry. The result is a wide-ranging enumeration of symmetric tangled honeycomb networks, providing a foundation for their exploration in both the chemistry lab and the geometers toolbox.
Collapse
|
5
|
saleh DI, Mahmoud SF, Etaiw SEH. Ultrasound-assisted synthesis and biological activity of nanosized supramolecular coordination polymers of silver(I) with chloride, thiocyanate, and 4,4′-bipyridine ligands. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2022.132940] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
|
6
|
Matemb Ma Ntep TJ, Gramm VK, Ruschewitz U, Janiak C. Acetylenedicarboxylate as a linker in the engineering of coordination polymers and metal-organic frameworks: challenges and potential. Chem Commun (Camb) 2022; 58:8900-8933. [PMID: 35899851 DOI: 10.1039/d2cc02665a] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Despite its simplicity as a short and rod-like linear linker, acetylenedicarboxylate (ADC) has for a long time been somewhat overlooked in the engineering of coordination polymers (CPs) and especially in the construction of porous metal-organic frameworks (MOFs). This situation seems to be stemming from the thermosensitivity of the free acid (H2ADC) precursor and its dicarboxylate, which makes the synthesis of their CP- and MOF-derivatives, as well as the evacuation of guest molecules from their pores, challenging. However, an increasing number of publications dealing with the synthesis, structural characterization and properties of ADC-based CPs and MOFs, disclose ways to tackle this obstacle. In this regard, using mostly room temperature solution synthesis or mechanochemical synthesis, and very rarely solvothermal synthesis, the ADC linker has successfully been used to form one-, two-, and three-dimensional CPs with metal cations from almost all groups of the periodic table of the elements, whereby its carboxylate groups adopt mainly all types of known coordination modes. ADC-based CPs feature properties, including negative thermal expansion, formation of non-centrosymmetric networks, long-range magnetic ordering, and solid-state polymerization. The first ADC-based microporous MOFs were obtained with Ce(IV), Hf(IV) and Zr(IV), in which the presence of the -CC- triple-bond within their backbone results in high hydrophilicity, high CO2 adsorption capacity and enthalpy, as well as the uptake of halogen vapors. This discloses the potential of ADC-MOFs for gas storage/separation and water adsorption-based applications. Furthermore, H2ADC/ADC was discovered to undergo facile in situ hydrohalogenation to yield halogen-functionalized fumarate-based CPs/MOFs. This review surveys investigations on ADC-based coordination polymers and metal-organic frameworks, and is intended to stimulate interest on this linker in chemists working in the fields of crystal chemistry or materials science.
Collapse
Affiliation(s)
- Tobie J Matemb Ma Ntep
- Institut für Anorganische Chemie und Strukturchemie, Heinrich-Heine-Universität Düsseldorf, Universitätsstraße 1, D-40225 Düsseldorf, Germany.
| | - Verena K Gramm
- Institut für Anorganische Chemie im Department für Chemie, Universität zu Köln, D-50939 Köln, Germany.
| | - Uwe Ruschewitz
- Institut für Anorganische Chemie im Department für Chemie, Universität zu Köln, D-50939 Köln, Germany.
| | - Christoph Janiak
- Institut für Anorganische Chemie und Strukturchemie, Heinrich-Heine-Universität Düsseldorf, Universitätsstraße 1, D-40225 Düsseldorf, Germany.
| |
Collapse
|
7
|
Gurtovyi RI, Gavrish SP, Tsymbal LV, Apostu MO, Cazacu M, Shova S, Lampeka YD. 2D coordination polymers and ionic complexes of the nickel(II) and zinc(II) cyclam cations with trigonal carboxylate linkers based on triazine core. Crystal structures, supramolecular catenation and spectral characterization. Polyhedron 2022. [DOI: 10.1016/j.poly.2022.115870] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
|
8
|
Tsymbal LV, Ardeleanu R, Shova S, Lampeka YD. Synthesis and crystal structure of bis[ trans-diaqua(1,4,8,11-tetraazacyclotetradecane-κ 4
N
1, N
4, N
8, N
11)nickel(II)] trans-(1,4,8,11-tetraazacyclotetradecane-κ 4
N
1, N
4, N
8, N
11)bis[4,4′,4′′-(1,3,5-trimethylbenzene-2,4,6-triyl)tris(hydrogen phenylphosphonato-κ O)]nickel(II) decahydrate. Acta Crystallogr E Crystallogr Commun 2022; 78:750-754. [PMID: 35855365 PMCID: PMC9260354 DOI: 10.1107/s2056989022006624] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2022] [Accepted: 06/26/2022] [Indexed: 11/10/2022]
Abstract
The components of the title compound, [Ni(C10H24N4)(H2O)2]2[Ni(C10H24N4)(C27H24O9P3)2]·10H2O are two centrosymmetric [Ni(C10H24N4)(H2O)2]2+ dications, a centrosymmetric [Ni(C10H24N4)(C27H24O9P3)2]4− tetra-anion and five crystallographically unique water molecules of crystallization. All of the nickel ions are coordinated by the four secondary N atoms of the macrocyclic cyclam ligands, which adopt the most energetically stable trans-III conformation, and the mutually trans O atoms of either water molecules in the cations or the phosphonate groups in the anion in a tetragonally distorted NiN4O2 octahedral coordination geometry. Strong O—H...O hydrogen bonds between the protonated and the non-protonated phosphonate O atoms of neighboring anions result in the formation of layers oriented parallel to the bc plane, which are linked into a three-dimensional network by virtue of numerous N—H...O and O—H...O hydrogen bonds arising from the sec-NH groups of the macrocycles, phosphonate O atoms and coordinated and non-coordinated water molecules.
Collapse
|
9
|
Agafonov MA, Alexandrov EV, Artyukhova NA, Bekmukhamedov GE, Blatov VA, Butova VV, Gayfulin YM, Garibyan AA, Gafurov ZN, Gorbunova YG, Gordeeva LG, Gruzdev MS, Gusev AN, Denisov GL, Dybtsev DN, Enakieva YY, Kagilev AA, Kantyukov AO, Kiskin MA, Kovalenko KA, Kolker AM, Kolokolov DI, Litvinova YM, Lysova AA, Maksimchuk NV, Mironov YV, Nelyubina YV, Novikov VV, Ovcharenko VI, Piskunov AV, Polyukhov DM, Polyakov VA, Ponomareva VG, Poryvaev AS, Romanenko GV, Soldatov AV, Solovyeva MV, Stepanov AG, Terekhova IV, Trofimova OY, Fedin VP, Fedin MV, Kholdeeva OA, Tsivadze AY, Chervonova UV, Cherevko AI, Shul′gin VF, Shutova ES, Yakhvarov DG. METAL-ORGANIC FRAMEWORKS IN RUSSIA: FROM THE SYNTHESIS AND STRUCTURE TO FUNCTIONAL PROPERTIES AND MATERIALS. J STRUCT CHEM+ 2022. [DOI: 10.1134/s0022476622050018] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
|
10
|
Thuéry P, Harrowfield J. Contrasting Networks and Entanglements in Uranyl Ion Complexes with Adipic and trans, trans-Muconic Acids. Inorg Chem 2022; 61:2790-2803. [PMID: 35089692 DOI: 10.1021/acs.inorgchem.1c03168] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
Abstract
Adipic (hexane-1,6-dicarboxylic, adpH2) and trans,trans-muconic (trans,trans-hexa-2,4-diene-1,6-dicarboxylic, mucH2) acids have been reacted with uranyl cations under solvo-hydrothermal conditions, yielding nine homo- or heterometallic complexes displaying in their crystal structure the effects of the different flexibility of the ligands. The complexes [PPh4]2[(UO2)2(adp)3] (1) and [Ni(bipy)3][(UO2)2(muc)3]·5H2O (2), where bipy is 2,2'-bipyridine, crystallize as diperiodic networks with the hcb topology, the layers being strongly puckered or quasiplanar, respectively. Whereas [(UO2)2(adp)3Ni(cyclam)]·2H2O (3), where cyclam is 1,4,8,11-tetraazacyclotetradecane, crystallizes as a diperiodic network, [(UO2)2(muc)3Ni(cyclam)]·2H2O (4) is a triperiodic framework in which the NiII cations are introduced as pillars within a uranyl-muc2- framework with the mog topology. [UO2(adp)(HCOO)2Cu(R,S-Me6cyclam)]·2H2O (5), where R,S-Me6cyclam is 7(R),14(S)-5,5,7,12,12,14-hexamethylcyclam, is a diperiodic assembly with the sql topology, and it crystallizes together with [H2NMe2]2[(UO2)2(adp)3] (6), a highly corrugated hcb network with a square-wave profile, which displays 3-fold parallel interpenetration. In contrast, [(UO2)3(muc)2(O)2Cu(R,S-Me6cyclam)] (7) is a diperiodic assembly containing hexanuclear, μ3-oxido-bridged secondary building units which are the nodes of a network with the hxl topology. The two related complexes [PPh3Me]2[(UO2)2(adp)3]·4H2O (8) and [PPh3Me]2[(UO2)2(muc)3]·H2O (9) crystallize as hcb networks, but their different shapes, undulated or quasiplanar, respectively, result in different entanglements, 2-fold parallel interpenetration in 8 and 2-fold inclined 2D → 3D polycatenation in 9.
Collapse
Affiliation(s)
- Pierre Thuéry
- Université Paris-Saclay, CEA, CNRS, NIMBE, 91191 Gif-sur-Yvette, France
| | - Jack Harrowfield
- Université de Strasbourg, ISIS, 8 allée Gaspard Monge, 67083 Strasbourg, France
| |
Collapse
|
11
|
Jin F, Nguyen HL, Zhong Z, Han X, Zhu C, Pei X, Ma Y, Yaghi OM. Entanglement of Square Nets in Covalent Organic Frameworks. J Am Chem Soc 2022; 144:1539-1544. [DOI: 10.1021/jacs.1c13468] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Affiliation(s)
- Fangying Jin
- Department of Chemistry, University of California−Berkeley, Kavli Energy Nanoscience Institute at UC Berkeley, and Berkeley Global Science Institute, Berkeley, California 94720, United States
| | - Ha L. Nguyen
- Department of Chemistry, University of California−Berkeley, Kavli Energy Nanoscience Institute at UC Berkeley, and Berkeley Global Science Institute, Berkeley, California 94720, United States
- Joint UAEU−UC Berkeley Laboratories for Materials Innovations, United Arab Emirates University, Al-Ain 15551, United Arab Emirates
| | - Zhiye Zhong
- School of Physical Science and Technology, ShanghaiTech University, Shanghai 201210, China
| | - Xing Han
- Department of Chemistry, University of California−Berkeley, Kavli Energy Nanoscience Institute at UC Berkeley, and Berkeley Global Science Institute, Berkeley, California 94720, United States
| | - Chenhui Zhu
- Advanced Light Source, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Xiaokun Pei
- Department of Chemistry, University of California−Berkeley, Kavli Energy Nanoscience Institute at UC Berkeley, and Berkeley Global Science Institute, Berkeley, California 94720, United States
| | - Yanhang Ma
- School of Physical Science and Technology, ShanghaiTech University, Shanghai 201210, China
| | - Omar M. Yaghi
- Department of Chemistry, University of California−Berkeley, Kavli Energy Nanoscience Institute at UC Berkeley, and Berkeley Global Science Institute, Berkeley, California 94720, United States
- Joint UAEU−UC Berkeley Laboratories for Materials Innovations, United Arab Emirates University, Al-Ain 15551, United Arab Emirates
| |
Collapse
|
12
|
Blasi D, Quici S, Orlandi S, Mercandelli P, Sokolov AV, Alexandrov EV, Carlucci L. Design and synthesis of new luminescent coordination networks of sql topology showing the highest degrees of interpenetration. CrystEngComm 2022. [DOI: 10.1039/d2ce00884j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The highest degree of interpenetration reported so far of 7- and 8-fold is realized in two luminescent sql 2D networks by self-assembly of a new nanometric-sized ligand with Ag(i) salts.
Collapse
Affiliation(s)
- Delia Blasi
- Dipartimento di Chimica, Università degli Studi di Milano, via Camillo Golgi 19, 20133 Milano, Italy
| | - Silvio Quici
- Istituto di Scienze e Tecnologie Chimiche “Giulio Natta” (SCITEC), Consiglio Nazionale delle Ricerche (CNR), via Camillo Golgi 19, 20133 Milano, Italy
| | - Simonetta Orlandi
- Istituto di Scienze e Tecnologie Chimiche “Giulio Natta” (SCITEC), Consiglio Nazionale delle Ricerche (CNR), via Camillo Golgi 19, 20133 Milano, Italy
| | - Pierluigi Mercandelli
- Dipartimento di Chimica, Università degli Studi di Milano, via Camillo Golgi 19, 20133 Milano, Italy
| | - Andrey V. Sokolov
- Institute of Experimental Medicine and Biotechnology, Samara State Medical University, Chapayevskaya St. 89, Samara 443099, Russian Federation
| | - Eugeny V. Alexandrov
- Institute of Experimental Medicine and Biotechnology, Samara State Medical University, Chapayevskaya St. 89, Samara 443099, Russian Federation
- Samara Center for Theoretical Material Science (SCTMS), Samara State Technical University, Molodogvardeyskaya St. 244, Samara 443100, Russian Federation
- Samara Branch of P.N. Lebedev Physical Institute of the Russian Academy of Science, Novo-Sadovaya St. 221, Samara 443011, Russian Federation
| | - Lucia Carlucci
- Dipartimento di Chimica, Università degli Studi di Milano, via Camillo Golgi 19, 20133 Milano, Italy
| |
Collapse
|
13
|
Menzel S, Heinen T, Boldog I, Beglau THY, Xing S, Spieß A, Woschko D, Janiak C. Metal-organic framework structures of fused hexagonal motifs with cuprophilic interactions of a triangular Cu(I)3(pyrazolate-benzoate) metallo-linker. CrystEngComm 2022. [DOI: 10.1039/d2ce00268j] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The reaction of the N,O-heteroditopic bifunctional ligand 4-(3,5-dimethyl-1H-pyrazol-4-yl)benzoic acid (H2mpba) with Cu(NO3)2·2.5H2O and Zn(NO3)2·4H2O or Zn(CH3COO)2·2H2O in N,N-dimethylformamide (DMF) results in concomitant formation of three bimetallic metal-organic frameworks (MOFs) with...
Collapse
|
14
|
Ju H, Kim S, Jung JH, Lee SS. A series of entangled MOFs constructed from flexible dipyridyl piperazine and rigid dicarboxylate: interpenetration, self-penetration, and polycatenation. CrystEngComm 2022. [DOI: 10.1039/d2ce00745b] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
By employing a flexible dipyridyl piperazine and a rigid linear dicarboxylate, four MOFs with different entangled structures involving a 3D inclined polycatenane and a 3D self-penetrated framework incorporating cyclic [3]catenane were isolated.
Collapse
Affiliation(s)
- Huiyeong Ju
- Western Seoul Center, Korea Basic Science Institute, Seoul 03759, South Korea
| | - Seulgi Kim
- Department of Chemistry and Research Institute of Natural Science, Gyeongsang National University, Jinju 52828, South Korea
| | - Jong Hwa Jung
- Department of Chemistry and Research Institute of Natural Science, Gyeongsang National University, Jinju 52828, South Korea
| | - Shim Sung Lee
- Department of Chemistry and Research Institute of Natural Science, Gyeongsang National University, Jinju 52828, South Korea
| |
Collapse
|
15
|
Alexandrov EV, Shevchenko AP, Nekrasova NA, Blatov VA. Topological methods for analysis and design of coordination polymers. RUSSIAN CHEMICAL REVIEWS 2022. [DOI: 10.1070/rcr5032] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
|
16
|
Alexandrov EV, Yang Y, Liang L, Wang J, Blatov VA. Topological transformations in metal–organic frameworks: a prospective design route? CrystEngComm 2022. [DOI: 10.1039/d2ce00264g] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We apply a topological approach based on the underlying net and transformation pattern concepts as well as on the ‘supernet–subnet’ formalism to uncover mechanisms of solid-state transformations in coordination polymers and metal–organic frameworks.
Collapse
Affiliation(s)
- Eugeny V. Alexandrov
- Samara Center for Theoretical Materials Science (SCTMS), Samara State Technical University, Molodogvardeyskaya St. 244, Samara, 443100, Russian Federation
- Samara Branch of P.N. Lebedev Physical Institute of the Russian Academy of Science, Novo-Sadovaya St. 221, Samara 443011, Russian Federation
| | - Yumin Yang
- State Key Laboratory of Solidification Processing, Northwestern Polytechnical University, Xi'an, Shaanxi 710072, People's Republic of China
| | - Lili Liang
- State Key Laboratory of Solidification Processing, Northwestern Polytechnical University, Xi'an, Shaanxi 710072, People's Republic of China
| | - Junjie Wang
- State Key Laboratory of Solidification Processing, Northwestern Polytechnical University, Xi'an, Shaanxi 710072, People's Republic of China
| | - Vladislav A. Blatov
- Samara Center for Theoretical Materials Science (SCTMS), Samara State Technical University, Molodogvardeyskaya St. 244, Samara, 443100, Russian Federation
- State Key Laboratory of Solidification Processing, Northwestern Polytechnical University, Xi'an, Shaanxi 710072, People's Republic of China
| |
Collapse
|
17
|
O'Keeffe M, Treacy MMJ. On Borromean links and related structures. Acta Crystallogr A Found Adv 2021; 77:379-391. [PMID: 34473093 DOI: 10.1107/s2053273321005568] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2021] [Accepted: 05/30/2021] [Indexed: 03/31/2023] Open
Abstract
The creation of knotted, woven and linked molecular structures is an exciting and growing field in synthetic chemistry. Presented here is a description of an extended family of structures related to the classical `Borromean rings', in which no two rings are directly linked. These structures may serve as templates for the designed synthesis of Borromean polycatenanes. Links of n components in which no two are directly linked are termed `n-Borromean' [Liang & Mislow (1994). J. Math. Chem. 16, 27-35]. In the classic Borromean rings the components are three rings (closed loops). More generally, they may be a finite number of periodic objects such as graphs (nets), or sets of strings related by translations as in periodic chain mail. It has been shown [Chamberland & Herman (2015). Math. Intelligencer, 37, 20-25] that the linking patterns can be described by complete directed graphs (known as tournaments) and those up to 13 vertices that are vertex-transitive are enumerated. In turn, these lead to ring-transitive (isonemal) n-Borromean rings. Optimal piecewise-linear embeddings of such structures are given in their highest-symmetry point groups. In particular, isonemal embeddings with rotoinversion symmetry are described for three, five, six, seven, nine, ten, 11, 13 and 14 rings. Piecewise-linear embeddings are also given of isonemal 1- and 2-periodic polycatenanes (chains and chain mail) in their highest-symmetry setting. Also the linking of n-Borromean sets of interleaved honeycomb nets is described.
Collapse
Affiliation(s)
- Michael O'Keeffe
- School of Molecular Sciences, Arizona State University, Tempe, Arizona 85287, USA
| | - Michael M J Treacy
- Department of Physics, Arizona State University, Tempe, Arizona 85287, USA
| |
Collapse
|
18
|
Chakraborty G, Park IH, Medishetty R, Vittal JJ. Two-Dimensional Metal-Organic Framework Materials: Synthesis, Structures, Properties and Applications. Chem Rev 2021; 121:3751-3891. [PMID: 33630582 DOI: 10.1021/acs.chemrev.0c01049] [Citation(s) in RCA: 266] [Impact Index Per Article: 88.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Affiliation(s)
- Gouri Chakraborty
- Department of Chemistry, National University of Singapore, 3 Science Drive 3, Singapore 117543, Singapore
| | - In-Hyeok Park
- Graduate School of Analytical Science and Technology (GRAST), Chungnam National University, Daejeon 34134, South Korea
| | | | - Jagadese J. Vittal
- Department of Chemistry, National University of Singapore, 3 Science Drive 3, Singapore 117543, Singapore
| |
Collapse
|
19
|
Mukherjee S, Zaworotko MJ. Crystal Engineering of Hybrid Coordination Networks: From Form to Function. TRENDS IN CHEMISTRY 2020. [DOI: 10.1016/j.trechm.2020.02.013] [Citation(s) in RCA: 40] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
|
20
|
Power SC, Baburin IA, Proserpio DM. Isotopy classes for 3-periodic net embeddings. Acta Crystallogr A Found Adv 2020; 76:275-301. [PMID: 32356780 PMCID: PMC7233014 DOI: 10.1107/s2053273320000625] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2019] [Accepted: 01/19/2020] [Indexed: 11/22/2022] Open
Abstract
Entangled embedded periodic nets and crystal frameworks are defined, along with their dimension type, homogeneity type, adjacency depth and periodic isotopy type. Periodic isotopy classifications are obtained for various families of embedded nets with small quotient graphs. The 25 periodic isotopy classes of depth-1 embedded nets with a single-vertex quotient graph are enumerated. Additionally, a classification is given of embeddings of n-fold copies of pcu with all connected components in a parallel orientation and n vertices in a repeat unit, as well as demonstrations of their maximal symmetry periodic isotopes. The methodology of linear graph knots on the flat 3-torus [0,1)3 is introduced. These graph knots, with linear edges, are spatial embeddings of the labelled quotient graphs of an embedded net which are associated with its periodicity bases.
Collapse
Affiliation(s)
- Stephen C. Power
- Department of Mathematics and Statistics, Lancaster University, Bailrigg, Lancaster LA1 1SQ, United Kingdom
| | - Igor A. Baburin
- Theoretische Chemie, Technische Universität Dresden, D-01062 Dresden, Germany
| | - Davide M. Proserpio
- Dipartimento di Chimica, Università degli Studi di Milano, Milano 20133, Italy
- Samara Center for Theoretical Materials Science (SCTMS), Samara State Technical University, Samara 443100, Russian Federation
| |
Collapse
|
21
|
Li YL, Alexandrov EV, Yin Q, Li L, Fang ZB, Yuan W, Proserpio DM, Liu TF. Record Complexity in the Polycatenation of Three Porous Hydrogen-Bonded Organic Frameworks with Stepwise Adsorption Behaviors. J Am Chem Soc 2020; 142:7218-7224. [PMID: 32212652 DOI: 10.1021/jacs.0c02406] [Citation(s) in RCA: 88] [Impact Index Per Article: 22.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Hydrogen-bonded organic frameworks (HOFs) show great potential in many applications, but few structure-property correlations have been explored in this field. In this work, we report that self-assembly of a rigid and planar ligand gives rise to flat hexagonal honeycomb motifs which are extended into undulated two-dimensional (2D) layers and finally generate three polycatenated HOFs with record complexity. This kind of undulation is absent in the 2D layers built from a very similar but nonplanar ligand, indicating that a slight torsion of ligand produces overwhelming structural change. This change delivers materials with unique stepwise adsorption behaviors under a certain pressure originating from the movement between mutually interwoven hexagonal networks. Meanwhile, high chemical stability, phase transformation, and preferential adsorption of aromatic compounds were observed in these HOFs. The results presented in this work would help us to understand the self-assembly behaviors of HOFs and shed light on the rational design of HOF materials for practical applications.
Collapse
Affiliation(s)
- Yu-Lin Li
- State Key Laboratory of Structural Chemistry, Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences, Fuzhou 350002, P. R. China
| | - Eugeny V Alexandrov
- Samara Center for Theoretical Material Science (SCTMS), Samara State Technical University, Molodogvardeyskaya St. 244, Samara 443100, Russia.,Samara Branch of P. N. Lebedev Physical Institute of the Russian Academy of Sciences, Novo-Sadovaya St. 221, Samara 443011, Russia
| | - Qi Yin
- State Key Laboratory of Structural Chemistry, Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences, Fuzhou 350002, P. R. China
| | - Lan Li
- State Key Laboratory of Structural Chemistry, Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences, Fuzhou 350002, P. R. China.,University of the Chinese Academy of Sciences, Beijing 100049, China
| | - Zhi-Bin Fang
- State Key Laboratory of Structural Chemistry, Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences, Fuzhou 350002, P. R. China
| | - Wenbing Yuan
- School of Environmental and Chemical Engineering, Foshan University, Foshan 528000, China
| | - Davide M Proserpio
- Samara Center for Theoretical Material Science (SCTMS), Samara State Technical University, Molodogvardeyskaya St. 244, Samara 443100, Russia.,Dipartimento di Chimica, Università degli studi di Milano, Via C. Golgi 19, 20133 Milano, Italy
| | - Tian-Fu Liu
- State Key Laboratory of Structural Chemistry, Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences, Fuzhou 350002, P. R. China.,University of the Chinese Academy of Sciences, Beijing 100049, China
| |
Collapse
|
22
|
O'Keeffe M, Treacy MMJ. Crystallographic descriptions of regular 2-periodic weavings of threads, loops and nets. ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES 2020; 76:110-120. [PMID: 32124849 DOI: 10.1107/s2053273320001278] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/04/2019] [Accepted: 01/29/2020] [Indexed: 11/11/2022]
Abstract
Piecewise linear descriptions are presented of weavings of threads, loops and 2-periodic nets. Crystallographic data are provided for regular structures, defined as those with one kind (symmetry-related) of vertex (corner) and edge (stick). These include infinite families of biaxial thread weaves, interwoven square lattices (sql), honeycomb (hcb) nets, and tetragonal and hexagonal polycatenanes.
Collapse
Affiliation(s)
- Michael O'Keeffe
- School of Molecular Sciences, Arizona State University, 551 E. University Drive, Tempe, Arizona 85281, USA
| | - Michael M J Treacy
- Department of Physics, Arizona State University, 550 E. Tyler Mall, Tempe, Arizona 85287, USA
| |
Collapse
|
23
|
Qiu SE, Yang SY. Reversible photo/thermal solid-state transformation of a coordination polymer. CrystEngComm 2020. [DOI: 10.1039/d0ce00905a] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
A 2D coordination polymer, 1, was synthesized, characterized, and investigated with single-crystal-to-single-crystal photoreaction and thermal pyrolysis.
Collapse
Affiliation(s)
- Sheng-En Qiu
- Department of Chemistry
- College of Chemistry and Chemical Engineering
- Xiamen University
- Xiamen 361005
- China
| | - Shi-Yao Yang
- Department of Chemistry
- College of Chemistry and Chemical Engineering
- Xiamen University
- Xiamen 361005
- China
| |
Collapse
|
24
|
Thuéry P, Atoini Y, Harrowfield J. Tubelike Uranyl-Phenylenediacetate Assemblies from Screening of Ligand Isomers and Structure-Directing Counterions. Inorg Chem 2019; 58:6550-6564. [PMID: 31017777 DOI: 10.1021/acs.inorgchem.9b00804] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Abstract
Reaction of 1,2-, 1,3-, or 1,4-phenylenediacetic acids (1,2-, 1,3-, or 1,4-H2PDA) with uranyl ions under solvo-hydrothermal conditions and in the presence of [M(L) n] q+ cations, in which M = transition metal cation, L = 2,2'-bipyridine (bipy) or 1,10-phenanthroline (phen), n = 2 or 3, and q = 1 or 2, gave 10 complexes which have been crystallographically characterized. The diacetate ligands are bis-chelating and the uranyl cations are tris-chelated in all cases. [UO2(1,2-PDA)2Zn(phen)2]·2H2O (1) and [UO2(1,4-PDA)2Mn(bipy)2]·H2O (2) are heterometallic, neutral one-dimensional (1D) coordination polymers in which the carboxylate-coordinated 3d block metal cation is either decorating only (1) or participates in polymer building (2). [Zn(phen)3][(UO2)2(1,3-PDA)3] (3) and [Ni(phen)3][(UO2)2(1,4-PDA)3]·H2O (4), with separate counterions, crystallize as anionic two-dimensional (2D) networks, as does [Cu(bipy)2][H2NMe2][(UO2)2(1,4-PDA)3] (5), which displays parallel 2D interpenetration. The complex [Zn(phen)3][(UO2)2(1,2-PDA)3]·7H2O (6) crystallizes as a ladderlike, slightly inflated ribbon. The same topology is found in [Zn(bipy)3][(UO2)2(1,3-PDA)3] (7), but the larger separation between coordination sites and the coexistence of curved and divergent ligand conformations produce a tubelike assembly. An analogous but more regular and spacious tubular geometry is found in [M(bipy)3][(UO2)2(1,4-PDA)3], with M = Co (8) or Ni (9), and {Λ-[Ru(bipy)3]}[(UO2)2(1,4-PDA)3] (10). The disordered counterions in 8 and 9 are replaced by well-ordered, enantiomerically pure chiral counterions in 10. The tubular assemblies formed in 7-10 are characterized by an oblong section and the presence of gaps in the walls, which enable the inclusion of two rows of counterions in the cavity.
Collapse
Affiliation(s)
- Pierre Thuéry
- NIMBE, CEA, CNRS , Université Paris-Saclay, CEA Saclay , 91191 Gif-sur-Yvette , France
| | - Youssef Atoini
- ISIS , Université de Strasbourg , 8 allée Gaspard Monge , 67083 Strasbourg , France
| | - Jack Harrowfield
- ISIS , Université de Strasbourg , 8 allée Gaspard Monge , 67083 Strasbourg , France
| |
Collapse
|
25
|
Sanii R, Hua C, Patyk-Kaźmierczak E, Zaworotko MJ. Solvent-directed control over the topology of entanglement in square lattice (sql) coordination networks. Chem Commun (Camb) 2019; 55:1454-1457. [DOI: 10.1039/c8cc09152h] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
Abstract
We report herein that the mode of entanglement in square lattice, sql, coordination networks formed by an extended bis-imidazole ligand, L, can be controlled by the solvent used during solvothermal synthesis.
Collapse
Affiliation(s)
- Rana Sanii
- Department of Chemical Sciences and Bernal Institute, University of Limerick, Castletroy Co
- Limerick
- Ireland
| | - Carol Hua
- School of Chemistry, University of Melbourne
- Victoria
- Australia
| | - Ewa Patyk-Kaźmierczak
- Department of Chemical Sciences and Bernal Institute, University of Limerick, Castletroy Co
- Limerick
- Ireland
- Department of Materials Chemistry, Faculty of Chemistry, Adam Mickiewicz University
- Poznań
| | - Michael J. Zaworotko
- Department of Chemical Sciences and Bernal Institute, University of Limerick, Castletroy Co
- Limerick
- Ireland
| |
Collapse
|
26
|
Balestri D, Scilabra P, Carraro C, Delledonne A, Bacchi A, Mazzeo PP, Carlucci L, Pelagatti P. Structural, thermal and topological characterization of coordination networks containing flexible aminocarboxylate ligands with a central biphenylene scaffold. CrystEngComm 2019. [DOI: 10.1039/c9ce01230c] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Flexible aminocarboxylate ligands have been used to construct coordination networks containing Zr, Zn and Cd featured by different dimensionalities and topologies.
Collapse
Affiliation(s)
- Davide Balestri
- Department of Chemical Sciences
- Life Sciences and Environmental Sustainability
- University of Parma
- 43124 Parma
- Italy
| | - Patrick Scilabra
- Department of Chemistry
- Materials and Chemistry Engineering “Giulio Natta”
- Politecnico di Milano
- 20131 Milano
- Italy
| | - Claudia Carraro
- Department of Chemical Sciences
- Life Sciences and Environmental Sustainability
- University of Parma
- 43124 Parma
- Italy
| | - Andrea Delledonne
- Department of Chemical Sciences
- Life Sciences and Environmental Sustainability
- University of Parma
- 43124 Parma
- Italy
| | - Alessia Bacchi
- Department of Chemical Sciences
- Life Sciences and Environmental Sustainability
- University of Parma
- 43124 Parma
- Italy
| | - Paolo Pio Mazzeo
- Department of Chemical Sciences
- Life Sciences and Environmental Sustainability
- University of Parma
- 43124 Parma
- Italy
| | - Lucia Carlucci
- Department of Chemistry
- Università degli Studi di Milano
- 20133 Milano
- Italy
| | - Paolo Pelagatti
- Department of Chemical Sciences
- Life Sciences and Environmental Sustainability
- University of Parma
- 43124 Parma
- Italy
| |
Collapse
|
27
|
Sun Y, Chen X, Wang F, Ma R, Guo X, Sun S, Guo H, Alexandrov EV. Variation of topologies and entanglements in metal–organic frameworks with mixed tris[4-(1H-imidazol-1-yl)phenyl]phosphine oxide and dicarboxylate ligands. Dalton Trans 2019; 48:5450-5458. [DOI: 10.1039/c9dt00249a] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Abstract
Six metal–organic frameworks with variation of topologies and entanglements have been successfully synthesized with mixed tris[4-(1H-imidazol-1-yl)phenyl]phosphine oxide and dicarboxylate ligands.
Collapse
Affiliation(s)
- Yingying Sun
- Department of Chemistry
- Changchun Normal University
- Changchun 130032
- People's Republic of China
| | - Xiaojie Chen
- State Key Laboratory of Inorganic Synthesis and Preparative Chemistry
- Jilin University
- Changchun 130012
- People's Republic of China
| | - Fengyuan Wang
- Department of Chemistry
- Changchun Normal University
- Changchun 130032
- People's Republic of China
| | - Ruidan Ma
- Department of Chemistry
- Changchun Normal University
- Changchun 130032
- People's Republic of China
| | - Xianmin Guo
- Department of Chemistry
- Changchun Normal University
- Changchun 130032
- People's Republic of China
| | - Shaowen Sun
- Department of Chemistry
- Changchun Normal University
- Changchun 130032
- People's Republic of China
| | - Huadong Guo
- Department of Chemistry
- Changchun Normal University
- Changchun 130032
- People's Republic of China
| | - Eugeny V. Alexandrov
- Samara State Technical University
- Samara 443100
- Russia
- Samara Center for Theoretical Material Science (SCTMS)
- Samara University
| |
Collapse
|
28
|
Sun S, Sun Y, Guo H, Fu X, Guo M, Liu S, Guo X, Zhang L, Alexandrov EV. Construction of Cd(II) coordination polymers from a fluorene-based bisimidazole ligand and polycarboxylic acids: syntheses, structures and properties. Inorganica Chim Acta 2018. [DOI: 10.1016/j.ica.2018.08.018] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
|
29
|
Thompson B, Hyde ST. A Theoretical Schema for Building Weavings of Nets via Colored Tilings of Two-Dimensional Spaces and Some Simple Polyhedral, Planar and Three-Periodic Examples. Isr J Chem 2018. [DOI: 10.1002/ijch.201800121] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Benjamin Thompson
- Dept of Applied Mathematics, Research School of Physical Sciences; Australian National University; Canberra Australia
| | - Stephen T. Hyde
- Dept of Applied Mathematics, Research School of Physical Sciences; Australian National University; Canberra Australia
| |
Collapse
|
30
|
Liu S, Guo M, Sun Y, Guo H, Guo X, Alexandrov E. Coordination polymers from bent ligands or how to obtain rare topologies with simple linkers and nodes. Inorganica Chim Acta 2018. [DOI: 10.1016/j.ica.2018.01.018] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
|
31
|
Barthel S, Alexandrov EV, Proserpio DM, Smit B. Distinguishing Metal-Organic Frameworks. CRYSTAL GROWTH & DESIGN 2018; 18:1738-1747. [PMID: 29541002 PMCID: PMC5843951 DOI: 10.1021/acs.cgd.7b01663] [Citation(s) in RCA: 49] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/28/2017] [Revised: 01/18/2018] [Indexed: 05/19/2023]
Abstract
We consider two metal-organic frameworks as identical if they share the same bond network respecting the atom types. An algorithm is presented that decides whether two metal-organic frameworks are the same. It is based on distinguishing structures by comparing a set of descriptors that is obtained from the bond network. We demonstrate our algorithm by analyzing the CoRe MOF database of DFT optimized structures with DDEC partial atomic charges using the program package ToposPro.
Collapse
Affiliation(s)
- Senja Barthel
- Laboratory
of Molecular Simulation, Institut des Sciences et Ingénierie
Chimiques, Valais, Ecole Polytechnique Fédérale
de Lausanne (EPFL), Rue
de l’Industrie 17, CH-1951 Sion, Switzerland
| | - Eugeny V. Alexandrov
- Samara
Center for Theoretical Material Science (SCTMS), Samara University, Moskovskoe
shosse 34, 443086 Samara, Russian Federation
- Samara
State Technical University, Molodogvardeyskaya street 244, 443100 Samara, Russian Federation
| | - Davide M. Proserpio
- Samara
Center for Theoretical Material Science (SCTMS), Samara University, Moskovskoe
shosse 34, 443086 Samara, Russian Federation
- Dipartimento
di Chimica, Università degli Studi
di Milano, Via Golgi
19, 20133 Milano, Italy
| | - Berend Smit
- Laboratory
of Molecular Simulation, Institut des Sciences et Ingénierie
Chimiques, Valais, Ecole Polytechnique Fédérale
de Lausanne (EPFL), Rue
de l’Industrie 17, CH-1951 Sion, Switzerland
| |
Collapse
|
32
|
Ji NN, Shi ZQ, Hu HL. A new Cd II coordination polymer with a self-penetrating architecture induced by the molecular conformation of a rigid bithiophene ligand. ACTA CRYSTALLOGRAPHICA SECTION C-STRUCTURAL CHEMISTRY 2018; 74:218-223. [PMID: 29400338 DOI: 10.1107/s2053229618001006] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/10/2017] [Accepted: 01/17/2018] [Indexed: 11/10/2022]
Abstract
The design and synthesis of coordination polymers with a self-penetrating architecture has attracted much interest not only due to their interesting structures but also due to their potential applications. 5,5'-Bis(pyridin-4-yl)-2,2'-bithiophene (bpbp), as a conjugated bithiophene ligand, can exhibit trans and cis conformations and this can lead to the construction of a self-penetrating architecture. In addition, the semi-rigid ancillary ligand 4,4'-oxybis(benzoic acid) (H2oba) can adopt different coordination modes, resulting in coordination polymers with high-dimensional skeletons. A new CdII coordination polymer based on mixed ligands, namely poly[diaquapentakis[μ-5,5'-bis(pyridin-4-yl)-2,2'-bithiophene-κ2N:N']bis(nitrato-κ2O,O')tetrakis(μ3-4,4'-oxydibenzoato)-κ10O:O,O':O'',O''';κ6O:O':O''-pentacadmium(II)], [Cd5(C14H14O5)4(NO3)2(C18H12N2S2)5(H2O)2]n, (I), has been synthesized under solvothermal conditions and characterized by single-crystal X-ray diffraction, IR spectroscopy and elemental analysis. Single-crystal X-ray diffraction indicates that there are three crystallographically independent CdII cations, three bpbp ligands, two deprotonated oba2- ligands, one nitrate ligand and one coordinated water molecule in the asymmetric unit. One CdII centre is seven-coordinated, exhibiting a distorted {CdN2O5} pentagonal bipyramidal geometry, while the other two Cd centres are both six-coordinated, showing slightly distorted {CdN2O4} octahedral geometries. The most interesting feature is the co-existence of trans and cis conformations in a single net, allowing structural interpenetration via self-threading and yet the expected self-penetrating structure was obtained. Topological analysis shows that the whole three-dimensional framework can be classified as a 3-nodal (4,6,6)-c net with Schläfli symbol {613.82}2{66}, which is a new topology. Furthermore, the luminescence properties of (I) were examined in the solid state at room temperature.
Collapse
Affiliation(s)
- Ning Ning Ji
- College of Chemistry and Chemical Engineering, Taishan University, Taian, Shandong 271021, People's Republic of China
| | - Zhi Qiang Shi
- College of Chemistry and Chemical Engineering, Taishan University, Taian, Shandong 271021, People's Republic of China
| | - Hai Liang Hu
- College of Chemical Engineering, Guizhou Institute of Technology, Guiyang, Guizhou 550003, People's Republic of China
| |
Collapse
|
33
|
Liu S, Guo M, Guo H, Sun Y, Guo X, Sun S, Alexandrov EV. Structural diversity of six metal–organic frameworks from a rigid bisimidazole ligand and their adsorption of organic dyes. RSC Adv 2018. [DOI: 10.1039/c7ra11754j] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Six entangled coordination polymers from a bisimidazole ligand and versatile carboxylate acids have been synthesized and structurally characterized. Their adsorption behaviors to organic dyes have also been evaluated.
Collapse
Affiliation(s)
- Siyu Liu
- Department of Chemistry
- Changchun Normal University
- Changchun
- P. R. China
| | - Mingming Guo
- Department of Chemistry
- Changchun Normal University
- Changchun
- P. R. China
| | - Huadong Guo
- Department of Chemistry
- Changchun Normal University
- Changchun
- P. R. China
| | - Yingying Sun
- Department of Chemistry
- Changchun Normal University
- Changchun
- P. R. China
| | - Xianmin Guo
- Department of Chemistry
- Changchun Normal University
- Changchun
- P. R. China
| | - Shaowen Sun
- Department of Chemistry
- Changchun Normal University
- Changchun
- P. R. China
| | - Eugeny V. Alexandrov
- Samara Center for Theoretical Materials Science (SCTMS)
- Samara National Research University
- Samara
- Russia 443011
| |
Collapse
|
34
|
Thuéry P, Harrowfield J. Structural Consequences of 1,4-Cyclohexanedicarboxylate Cis/Trans Isomerism in Uranyl Ion Complexes: From Molecular Species to 2D and 3D Entangled Nets. Inorg Chem 2017; 56:13464-13481. [PMID: 29039945 DOI: 10.1021/acs.inorgchem.7b02176] [Citation(s) in RCA: 45] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
trans-1,4-Cyclohexanedicarboxylic acid (t-1,4-chdcH2) or the commercially available mixture of the cis and trans isomers (c,t-1,4-chdcH2) has been used in the synthesis of a series of 14 uranyl ion complexes, all obtained under solvohydrothermal conditions, some in the presence of additional metal cations and/or 2,2'-bipyridine (bipy). With its two isomeric forms having very different shapes and its great sensitivity to the experimental conditions, 1,4-chdc2- appears to be suitable for the synthesis of uranyl ion complexes displaying a wide range of architectures. Under the conditions used, the pure trans isomer gives only the complexes [UO2(t-1,4-chdc)(H2O)2] (1) and [UO2(t-1,4-chdc)] (2), which crystallize as one- and two-dimensional (1D and 2D) species, respectively. Complexes containing either the cis isomer alone or mixtures of the two isomers in varying proportion were obtained from the isomer mixture. The neutral complexes [UO2(c-1,4-chdc)(DMF)] (3) and [UO2(c-1,4-chdc)(bipy)] (4) are 2D and 1D assemblies, respectively, while all the other complexes are anionic and include various counterions. [C(NH2)3]3[H2NMe2][(UO2)4(c-1,4-chdc)6]·H2O (5) crystallizes as a three-dimensional (3D) framework with {103} topology. While [H2NMe2]2[(UO2)2(c-1,4-chdc)2(t-1,4-chdc)]·DMF·2H2O (6) is a 1D ladderlike polymer, [H2NMe2]2[(UO2)2(c-1,4-chdc)(t-1,4-chdc)2]·2H2O (7), which differs in the cis/trans ratio, is a 3-fold 2D interpenetrated network with {63} honeycomb topology. The related [H2NMe2]2[(UO2)2(c,t-1,4-chdc)3]·2.5H2O (8), with one disordered ligand of uncertain geometry, is a 3-fold 3D interpenetrated system. The two isomorphous complexes [Co(bipy)3][(UO2)2(c-1,4-chdc)3]·1.5H2O (9) and [Cd(bipy)3][(UO2)2(c-1,4-chdc)3]·1.5H2O (10) form 3D frameworks with the {103} srs topological type. In contrast, [Ni(bipy)3]2[(UO2)4(c-1,4-chdc)2(t-1,4-chdc)(NO3)6]·2H2O (11) is a molecular, tetranuclear complex due to the presence of terminal nitrate ligands. A 2-fold 3D interpenetration of frameworks with {103} ths topology is observed in [Cu(bipy)2]2[(UO2)2(c-1,4-chdc)2(t-1,4-chdc)]·2H2O (12), while [Zn(bipy)3][(UO2)2(c-1,4-chdc)3]·4H2O (13) crystallizes as a 2D net with the common {4.82} fes topological type. The additional PbII cation is an essential part of the 3D framework formed in [UO2Pb2(c-1,4-chdc)(t-1,4-chdc)2(bipy)2] (14), in which uranyl and its ligands alone form 1D subunits. Together with previous results, the solid-state uranyl emission properties of seven of the present complexes evidence a general trend, with the maxima for the complexes with O6 equatorial environments being blue-shifted with respect to those for complexes with O5 environments.
Collapse
Affiliation(s)
- Pierre Thuéry
- NIMBE, CEA, CNRS, Université Paris-Saclay, CEA Saclay , 91191 Gif-sur-Yvette, France
| | - Jack Harrowfield
- ISIS, Université de Strasbourg , 8 allée Gaspard Monge, 67083 Strasbourg, France
| |
Collapse
|
35
|
Li K, Blatov VA, Fan T, Zheng TR, Zhang YQ, Li BL, Wu B. A series of Cd(ii) coordination polymers based on flexible bis(triazole) and multicarboxylate ligands: topological diversity, entanglement and properties. CrystEngComm 2017. [DOI: 10.1039/c7ce01176h] [Citation(s) in RCA: 33] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Eight Cd(ii) coordination polymers with diverse topologies based on 1,4-bis(1,2,4-triazol-4-ylmethyl)benzene and multicarboxylate ligands were synthesized and characterized. The 3D topologies of 1, 2 and 3 are unprecedented.
Collapse
Affiliation(s)
- Ke Li
- State and Local Joint Engineering Laboratory for Functional Polymeric Materials
- College of Chemistry
- Chemical Engineering and Materials Science
- Soochow University
- Suzhou 215123
| | - Vladislav A. Blatov
- Samara Center for Theoretical Materials Science (SCTMS)
- Samara University
- Samara 443011
- Russia
- School of Materials Science and Engineering
| | - Tao Fan
- School of Materials Science and Engineering
- Northwestern Polytechnical University
- PR China
| | - Tian-Rui Zheng
- State and Local Joint Engineering Laboratory for Functional Polymeric Materials
- College of Chemistry
- Chemical Engineering and Materials Science
- Soochow University
- Suzhou 215123
| | - Ya-Qian Zhang
- State and Local Joint Engineering Laboratory for Functional Polymeric Materials
- College of Chemistry
- Chemical Engineering and Materials Science
- Soochow University
- Suzhou 215123
| | - Bao-Long Li
- State and Local Joint Engineering Laboratory for Functional Polymeric Materials
- College of Chemistry
- Chemical Engineering and Materials Science
- Soochow University
- Suzhou 215123
| | - Bing Wu
- State and Local Joint Engineering Laboratory for Functional Polymeric Materials
- College of Chemistry
- Chemical Engineering and Materials Science
- Soochow University
- Suzhou 215123
| |
Collapse
|
36
|
He YP, Yuan LB, Zhang J. Polycatenation tuned microporosity of two metal–tris(4′-carboxybiphenyl)amine frameworks with multilayer structures. Dalton Trans 2017; 46:13352-13355. [DOI: 10.1039/c7dt02976d] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Abstract
By employing a nanosized tris(4′-carboxybiphenyl)amine ligand to assemble with Zn2+ ions, a novel trilayer network (FIR-37) and an unprecedented 2D → 3D microporous polycatenation framework (FIR-38) based on unusual tetralayers have been synthesized and structurally characterized.
Collapse
Affiliation(s)
- Yan-Ping He
- State Key Laboratory of Structural Chemistry
- Fujian Institute of Research on the Structure of Matter
- Chinese Academy of Sciences
- Fuzhou
- China
| | - Lv-Bing Yuan
- State Key Laboratory of Structural Chemistry
- Fujian Institute of Research on the Structure of Matter
- Chinese Academy of Sciences
- Fuzhou
- China
| | - Jian Zhang
- State Key Laboratory of Structural Chemistry
- Fujian Institute of Research on the Structure of Matter
- Chinese Academy of Sciences
- Fuzhou
- China
| |
Collapse
|