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Tomović AŽ, Miljkovic H, Dražić MS, Jovanović VP, Zikic R. Tunnel junction sensing of TATP explosive at the single-molecule level. Phys Chem Chem Phys 2023; 25:26648-26658. [PMID: 37772423 DOI: 10.1039/d3cp02767h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/30/2023]
Abstract
Triacetone triperoxide (TATP) is a highly potent homemade explosive commonly used in terrorist attacks. Its detection poses a significant challenge due to its volatility, and the lack of portability of current sensing techniques. To address this issue, we propose a novel approach based on single-molecule TATP detection in the air using a device where tunneling current in N-terminated carbon-nanotubes nanogaps is measured. By employing the density functional theory combined with the non-equilibrium Green's function method, we show that current of tens of nanoamperes passes through TATP trapped in the nanogap, with a discrimination ratio of several orders of magnitude even against prevalent indoor volatile organic compounds (VOCs). This high tunneling current through TATP's highest occupied molecular orbital (HOMO) is facilitated by the strong electric field generated by N-C polar bonds at the electrode ends and by the hybridization between TATP and the electrodes, driven by oxygen atoms within the probed molecule. The application of the same principle is discussed for graphene nanogaps and break-junctions.
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Affiliation(s)
- Aleksandar Ž Tomović
- University of Belgrade, Institute for Multidisciplinary Research, Kneza Višeslava 1, 11030 Belgrade, Serbia.
| | - Helena Miljkovic
- University of Belgrade, Institute for Multidisciplinary Research, Kneza Višeslava 1, 11030 Belgrade, Serbia.
| | - Miloš S Dražić
- University of Belgrade, Institute for Multidisciplinary Research, Kneza Višeslava 1, 11030 Belgrade, Serbia.
| | - Vladimir P Jovanović
- University of Belgrade, Institute for Multidisciplinary Research, Kneza Višeslava 1, 11030 Belgrade, Serbia.
| | - Radomir Zikic
- University of Belgrade, Institute for Multidisciplinary Research, Kneza Višeslava 1, 11030 Belgrade, Serbia.
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2
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Safari R, Hadi H, Shamlouei HR. Quantum study of symmetrical/asymmetrical charge and energy transfer in a simple candidate molecular switch. Struct Chem 2022. [DOI: 10.1007/s11224-022-01917-z] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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3
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Djurišić I, Jovanović VP, Dražić MS, Tomović AŽ, Zikic R. Predicting Finite-Bias Tunneling Current Properties from Zero-Bias Features: The Frontier Orbital Bias Dependence at an Exemplar Case of DNA Nucleotides in a Nanogap. NANOMATERIALS 2021; 11:nano11113021. [PMID: 34835784 PMCID: PMC8624643 DOI: 10.3390/nano11113021] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/09/2021] [Revised: 11/05/2021] [Accepted: 11/08/2021] [Indexed: 01/06/2023]
Abstract
The electrical current properties of single-molecule sensing devices based on electronic (tunneling) transport strongly depend on molecule frontier orbital energy, spatial distribution, and position with respect to the electrodes. Here, we present an analysis of the bias dependence of molecule frontier orbital properties at an exemplar case of DNA nucleotides in the gap between H-terminated (3, 3) carbon nanotube (CNT) electrodes and its relation to transversal current rectification. The electronic transport properties of this simple single-molecule device, whose characteristic is the absence of covalent bonding between electrodes and a molecule between them, were obtained using density functional theory and non-equilibrium Green's functions. As in our previous studies, we could observe two distinct bias dependences of frontier orbital energies: the so-called strong and the weak pinning regimes. We established a procedure, from zero-bias and empty-gap characteristics, to estimate finite-bias electronic tunneling transport properties, i.e., whether the molecular junction would operate in the weak or strong pinning regime. We also discuss the use of the zero-bias approximation to calculate electric current properties at finite bias. The results from this work could have an impact on the design of new single-molecule applications that use tunneling current or rectification applicable in high-sensitivity sensors, protein, or DNA sequencing.
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Zhang XH, Liu SJ, Tian L, Wan Q, Hu AM, Li XF. Rectification with controllable directions in sulfur-doped armchair graphene nanoribbon heterojunctions. Chem Phys 2021. [DOI: 10.1016/j.chemphys.2021.111140] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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Djurišić I, Dražić MS, Tomović AŽ, Spasenović M, Šljivančanin Ž, Jovanović VP, Zikic R. Field Effect and Local Gating in Nitrogen-Terminated Nanopores (NtNP) and Nanogaps (NtNG) in Graphene. Chemphyschem 2021; 22:336-341. [PMID: 33245835 DOI: 10.1002/cphc.202000771] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2020] [Revised: 11/26/2020] [Indexed: 11/08/2022]
Abstract
Functionalization of electrodes is a wide-used strategy in various applications ranging from single-molecule sensing and protein sequencing, to ion trapping, to desalination. We demonstrate, employing non-equilibrium Green's function formalism combined with density functional theory, that single-species (N, H, S, Cl, F) termination of graphene nanogap electrodes results in a strong in-gap electrostatic field, induced by species-dependent dipoles formed at the electrode ends. Consequently, the field increases or decreases electronic transport through a molecule (benzene) placed in the nanogap by shifting molecular levels by almost 2 eV in respect to the electrode Fermi level via a field effect akin to the one used for field-effect transistors. We also observed the local gating in graphene nanopores terminated with different single-species atoms. Nitrogen-terminated nanogaps (NtNGs) and nanopores (NtNPs) show the strongest effect. The in-gap potential can be transformed from a plateau-like to a saddle-like shape by tailoring NtNG and NtNP size and termination type. In particular, the saddle-like potential is applicable in single-ion trapping and desalination devices.
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Affiliation(s)
- Ivana Djurišić
- University of Belgrade, Institute for Multidisciplinary Research, Kneza Višeslava 1, 11030, Belgrade, Serbia
| | - Miloš S Dražić
- University of Belgrade, Institute for Multidisciplinary Research, Kneza Višeslava 1, 11030, Belgrade, Serbia
| | - Aleksandar Ž Tomović
- University of Belgrade, Institute for Multidisciplinary Research, Kneza Višeslava 1, 11030, Belgrade, Serbia
| | - Marko Spasenović
- University of Belgrade, Institute of Chemistry, Technology and Metallurgy, Center of Microelectronic Technologies, Njegoševa 12, 11000, Belgrade, Serbia
| | - Željko Šljivančanin
- University of Belgrade, "Vinča" Institute of Nuclear Sciences - National Institute of the Republic of Serbia, PO Box 522, 11001, Belgrade, Serbia
| | - Vladimir P Jovanović
- University of Belgrade, Institute for Multidisciplinary Research, Kneza Višeslava 1, 11030, Belgrade, Serbia
| | - Radomir Zikic
- University of Belgrade, Institute for Multidisciplinary Research, Kneza Višeslava 1, 11030, Belgrade, Serbia
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Polakovsky A, Showman J, Valdiviezo J, Palma JL. Quantum interference enhances rectification behavior of molecular devices. Phys Chem Chem Phys 2021; 23:1550-1557. [DOI: 10.1039/d0cp05801g] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A theoretical and computational study of the effect of quantum interference on the rectification behavior of unimolecular devices.
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Affiliation(s)
| | - Janai Showman
- Department of Chemistry
- The Pennsylvania State University
- Lemont Furnace
- USA
| | | | - Julio L. Palma
- Department of Chemistry
- The Pennsylvania State University
- Lemont Furnace
- USA
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Siddiqui SA. Molecular modelling and simulation for the design of molecular diodes using density functional theory. MOLECULAR SIMULATION 2020. [DOI: 10.1080/08927022.2020.1726913] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
Affiliation(s)
- Shamoon Ahmad Siddiqui
- Promising Centre for Sensors and Electronic Devices, Najran University, Najran, Saudi Arabia
- Department of Physics, College of Arts and Science, Najran University, Najran, Saudi Arabia
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Clancy AJ, Bayazit MK, Hodge SA, Skipper NT, Howard CA, Shaffer MSP. Charged Carbon Nanomaterials: Redox Chemistries of Fullerenes, Carbon Nanotubes, and Graphenes. Chem Rev 2018; 118:7363-7408. [DOI: 10.1021/acs.chemrev.8b00128] [Citation(s) in RCA: 129] [Impact Index Per Article: 21.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Adam J. Clancy
- Department of Chemistry, Imperial College London, London SW7 2AZ, U.K
- Institute for Materials Discovery, University College London, London WC1E 7JE, U.K
| | - Mustafa K. Bayazit
- Department of Chemistry, Imperial College London, London SW7 2AZ, U.K
- Department of Chemical Engineering, University College London, London WC1E 7JE, U.K
| | - Stephen A. Hodge
- Department of Chemistry, Imperial College London, London SW7 2AZ, U.K
- Cambridge Graphene Centre, Engineering Department, University of Cambridge, Cambridge CB3 0FA, U.K
| | - Neal T. Skipper
- Department of Physics & Astronomy, University College London, London WC1E 6BT, U.K
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Thong AZ, Shaffer MSP, Horsfield AP. Rectification and negative differential resistance via orbital level pinning. Sci Rep 2018; 8:9120. [PMID: 29904142 PMCID: PMC6002475 DOI: 10.1038/s41598-018-27557-0] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2017] [Accepted: 05/31/2018] [Indexed: 11/09/2022] Open
Abstract
A donor-acceptor system, 4-thiophenyl-azafulleroid (4TPA-C60), is investigated at the point of HOMO/LUMO resonance and beyond to understand how negative differential resistance (NDR) features may be observed in such systems. Our previous investigation showed that charge transfer between the occupied and unoccupied states at resonance hindered crossing of the HOMO and LUMO levels, thus preventing the formation of an NDR feature. In this work, it is shown that the negative differential resistance feature of 4TPA-C60 can be tailored based on the couplings at the metal/molecule interface. Ab initio calculations show that limited charge extraction from atomically sharp contacts results in a HOMO-LUMO pinning effect which delays the onset of the NDR feature. Subsequent unpinning of the states can only occur when additional charge extraction channels enter the bias window, highlighting an important role which non-frontier states play in charge transport. The proposed charge transfer mechanism is then exploited by introducing a fluorine atom into the C60 cage to tune the energies of the acceptor, and narrow the width of the current peak. These findings not only demonstrate the importance of the metal/molecule interface in the design of molecular electronic architectures but also serve to inform future design of molecular diodes and RTDs.
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Affiliation(s)
- Aaron Zhenghui Thong
- Deparment of Materials and Thomas Young Centre, Imperial College London, London, SW7 2AZ, UK
| | - Milo S P Shaffer
- Deparment of Chemistry, Imperial College London, London, SW7 2AZ, UK
| | - Andrew P Horsfield
- Deparment of Materials and Thomas Young Centre, Imperial College London, London, SW7 2AZ, UK.
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Koley S, Chakrabarti S. Large Negative Differential Resistance and Rectification from a Donor-σ-Acceptor Molecule in the Presence of Dissimilar Electrodes. Chemistry 2018; 24:5876-5882. [DOI: 10.1002/chem.201705683] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2017] [Indexed: 11/08/2022]
Affiliation(s)
- Sayantanu Koley
- Department of Chemistry; University of Calcutta; 92, A. P. C. Road Kolkata 700009 India
| | - Swapan Chakrabarti
- Department of Chemistry; University of Calcutta; 92, A. P. C. Road Kolkata 700009 India
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Shao Y, Pang R, Pan H, Shi X. Fullerene/layered antiferromagnetic reconstructed spinterface: Subsurface layer dominates molecular orbitals' spin-split and large induced magnetic moment. J Chem Phys 2018; 148:114704. [PMID: 29566528 DOI: 10.1063/1.5012926] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
The interfaces between organic molecules and magnetic metals have gained increasing interest for both fundamental reasons and applications. Among them, the C60/layered antiferromagnetic (AFM) interfaces have been studied only for C60 bonded to the outermost ferromagnetic layer [S. L. Kawahara et al., Nano Lett. 12, 4558 (2012) and D. Li et al., Phys. Rev. B 93, 085425 (2016)]. Here, via density functional theory calculations combined with evidence from the literature, we demonstrate that C60 adsorption can reconstruct the layered-AFM Cr(001) surface at elevated annealing temperatures so that C60 bonds to both the outermost and the subsurface Cr layers in opposite spin directions. Surface reconstruction drastically changes the adsorbed molecule spintronic properties: (1) the spin-split p-d hybridization involves multi-orbitals of C60 and top two layers of Cr with opposite spin-polarization, (2) the subsurface Cr atom dominates the C60 electronic properties, and (3) the reconstruction induces a large magnetic moment of 0.58 μB in C60 as a synergistic effect of the top two Cr layers. The induced magnetic moment in C60 can be explained by the magnetic direct-exchange mechanism, which can be generalized to other C60/magnetic metal systems. Understanding these complex hybridization behaviors is a crucial step for molecular spintronic applications.
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Affiliation(s)
- Yangfan Shao
- Department of Physics, Southern University of Science and Technology, Shenzhen 518055, China
| | - Rui Pang
- International Laboratory of Quantum Functional Materials of Henan and School of Physics and Engineering, Zhengzhou University, Zhengzhou 450001, China
| | - Hui Pan
- Institute of Applied Physics and Materials Engineering, University of Macau, Macau, China
| | - Xingqiang Shi
- Department of Physics, Southern University of Science and Technology, Shenzhen 518055, China
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