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Escobedo-González RG, Moyers-Montoya ED, Martínez-Pérez CA, García-Casillas PE, Miranda-Ruvalcaba R, Nicolás-Vázquez MIN. In Silico Study of Novel Cyclodextrin Inclusion Complexes of Polycaprolactone and Its Correlation with Skin Regeneration. Int J Mol Sci 2023; 24:ijms24108932. [PMID: 37240276 DOI: 10.3390/ijms24108932] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2023] [Revised: 04/26/2023] [Accepted: 05/04/2023] [Indexed: 05/28/2023] Open
Abstract
Three novel biomaterials obtained via inclusion complexes of β-cyclodextrin, 6-deoxi-6-amino-β-cyclodextrin and epithelial growth factor grafted to 6-deoxi-6-amino-β-cyclodextrin with polycaprolactone. Furthermore, some physicochemical, toxicological and absorption properties were predicted using bioinformatics tools. The electronic, geometrical and spectroscopical calculated properties agree with the properties obtained via experimental methods, explaining the behaviors observed in each case. The interaction energy was obtained, and its values were -60.6, -20.9 and -17.1 kcal/mol for β-cyclodextrin/polycaprolactone followed by the 6-amino-β-cyclodextrin-polycaprolactone complex and finally the complex of epithelial growth factor anchored to 6-deoxy-6-amino-β-cyclodextrin/polycaprolactone. Additionally, the dipolar moments were calculated, achieving values of 3.2688, 5.9249 and 5.0998 Debye, respectively, and in addition the experimental wettability behavior of the studied materials has also been explained. It is important to note that the toxicological predictions suggested no mutagenic, tumorigenic or reproductive effects; moreover, an anti-inflammatory effect has been shown. Finally, the improvement in the cicatricial effect of the novel materials has been conveniently explained by comparing the poly-caprolactone data obtained in the experimental assessments.
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Affiliation(s)
- René Gerardo Escobedo-González
- Department of Industrial Maintenance, Technological University of the City of Juárez, Av. Universidad Tecnológica No. 3051, Col. Lote Bravo II, Ciudad Juárez 32695, Mexico
| | - Edgar Daniel Moyers-Montoya
- Institute of Engineering and Technology, Autonomous University of the City of Juárez (UACJ), Ave. Del Charro 450 Norte, Ciudad Juárez 32310, Mexico
| | - Carlos Alberto Martínez-Pérez
- Institute of Engineering and Technology, Autonomous University of the City of Juárez (UACJ), Ave. Del Charro 450 Norte, Ciudad Juárez 32310, Mexico
| | - Perla Elvia García-Casillas
- Institute of Engineering and Technology, Autonomous University of the City of Juárez (UACJ), Ave. Del Charro 450 Norte, Ciudad Juárez 32310, Mexico
- Applied Chemistry Research Center, Blvd. Enrique Reyna Hermosillo No. 140, Saltillo 25294, Mexico
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Akhter S, Usman M, Arjmand F, Tabassum S. Synthesis, structural characterization, in vitro comparative DNA/RNA binding, and computational studies of half-sandwich Ru (II)(ƞ6-p-cymene) aminoquinoline complex. Polyhedron 2022. [DOI: 10.1016/j.poly.2021.115618] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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3
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Guk DA, Krasnovskaya OO, Beloglazkina EK. Coordination compounds of biogenic metals as cytotoxic agents in cancer therapy. RUSSIAN CHEMICAL REVIEWS 2021. [DOI: 10.1070/rcr5016] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
Abstract
The review summarizes the data on the structures and methods for the synthesis of compounds with anticancer activity based on biogenic metals, which can replace platinum drugs prevailing in cytotoxic therapy. The main focus is given to the comparison of the mechanisms of the cytotoxic action of these complexes, their efficacy and prospects of their use in clinical practice. This is the first systematic review of cytotoxic zinc, iron, cobalt and copper compounds. The structure – activity relationships and the mechanisms of antitumour action are formulated for each type of metal complexes.
The bibliography includes 181 references.
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4
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Bilgiçli AT, Kandemir T, Tüzün B, Arıduru R, Günsel A, Abak Ç, Yarasir MN, Arabaci G. Octa‐substituted Zinc(II), Cu(II), and Co(II) phthalocyanines with 1‐(4‐hydroxyphenyl)propane‐1‐one: Synthesis, sensitive protonation behaviors, Ag(I) induced H‐type aggregation properties, antibacterial–antioxidant activity, and molecular docking studies. Appl Organomet Chem 2021. [DOI: 10.1002/aoc.6353] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Affiliation(s)
| | | | - Burak Tüzün
- Department of Chemistry Cumhuriyet University Sivas Turkey
| | - Rana Arıduru
- Department of Chemistry Sakarya University Sakarya Turkey
| | - Armağan Günsel
- Department of Chemistry Sakarya University Sakarya Turkey
| | - Çağla Abak
- Department of Chemistry Sakarya University Sakarya Turkey
| | | | - Gulnur Arabaci
- Department of Chemistry Sakarya University Sakarya Turkey
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5
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Synthesis, antioxidant, DNA cleavage and antimicrobial properties of phthalocyanine complexes bearing the poly-hydroxyl groups. CHEMICAL PAPERS 2020. [DOI: 10.1007/s11696-020-01432-7] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
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6
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Genç Bilgiçli H, Bilgiçli AT, Günsel A, Tüzün B, Ergön D, Yarasir MN, Zengin M. Turn‐on fluorescent probe for Zn
2+
ions based on thiazolidine derivative. Appl Organomet Chem 2020. [DOI: 10.1002/aoc.5624] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Affiliation(s)
| | | | - Armağan Günsel
- Department of ChemistrySakarya University 54050 Sakarya Turkey
| | - Burak Tüzün
- Department of ChemistryCumhuriyet University Sivas Turkey
| | - Derya Ergön
- Department of ChemistrySakarya University 54050 Sakarya Turkey
| | | | - Mustafa Zengin
- Department of ChemistrySakarya University 54050 Sakarya Turkey
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Acetophenone substituted phthalocyanines and their graphene quantum dots conjugates as photosensitizers for photodynamic antimicrobial chemotherapy against Staphylococcus aureus. Photodiagnosis Photodyn Ther 2020; 29:101607. [DOI: 10.1016/j.pdpdt.2019.101607] [Citation(s) in RCA: 24] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2019] [Revised: 11/21/2019] [Accepted: 11/22/2019] [Indexed: 11/18/2022]
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8
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Experimental and Theoretical Study of Effect of Allium sativum Extracts as Corrosion Inhibitor on Mild Steel in 1 M HCl Medium. ACTA ACUST UNITED AC 2020. [DOI: 10.1007/s40735-020-00336-z] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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9
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Tüzün B. Investi̇gati̇on of pyrazoly derivatives schi̇ff base li̇gands and thei̇r metal complexes used as anti-cancer drug. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2020; 227:117663. [PMID: 31655391 DOI: 10.1016/j.saa.2019.117663] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/20/2018] [Revised: 10/11/2019] [Accepted: 10/14/2019] [Indexed: 06/10/2023]
Abstract
In this study, six pyrazole derivatives containing hetero atoms have been analyzed using theoretical calculation method. The ligands were tested by HF, B3LYP and M06-2X methods using 3-21G, 6-31G, 6-31G(d, p), and sdd basis sets. The results showed that Ligand 5 has a HOMO value of -7.470 at HF / 6-31g (d.p) level. These ligands were investigated in IR, NMR, and UV-VIS spectrum, then experimental values were compared with IR and NMR spectrum data. The solvents, whose effects were investigated in UV-VIS spectrum, were gas phase (ε = 1), toluene (ε = 2.3741), chloroform (ε = 4.7113), methanol (ε = 32.613), water (ε = 78.3553), and n-methylformamide-mixture (ε = 181.56). Metal complexes of tested ligands were produced with copper, nickel, and zinc. Lastly, the interactions between these six pyrazole derivatives and three proteins, namely 3dju, 2IJN, and 1JNX, were also examined. Biological and anti-cancer properties of six pyrazole derivatives were analyzed by DockingServer. In docking calculations, Estimated Free Energy of Binding value of Ligand 5 was found to be -4.87, -4.82, -1.73 respectively, which indicated the highest biological activity.
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Affiliation(s)
- Burak Tüzün
- Sivas Cumhuriyet University, Faculty of Science, Chemistry Department, SİVAS, Turkey.
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10
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Bytyqi-Damoni A, Kestane A, Taslimi P, Tuzun B, Zengin M, Bilgicli HG, Gulcin İ. Novel carvacrol based new oxypropanolamine derivatives: Design, synthesis, characterization, biological evaluation, and molecular docking studies. J Mol Struct 2020. [DOI: 10.1016/j.molstruc.2019.127297] [Citation(s) in RCA: 26] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
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11
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Günsel A, Kobyaoğlu A, Bilgiçli AT, Tüzün B, Tosun B, Arabaci G, Yarasir MN. Novel biologically active metallophthalocyanines as promising antioxidant-antibacterial agents: Synthesis, characterization and computational properties. J Mol Struct 2020. [DOI: 10.1016/j.molstruc.2019.127127] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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12
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Günsel A, Bilgiçli AT, Tüzün B, Pişkin H, Yarasir MN, Gündüz B. Optoelectronic parameters of peripherally tetra-substituted copper(ii) phthalocyanines and fabrication of a photoconductive diode for various conditions. NEW J CHEM 2020. [DOI: 10.1039/c9nj05287a] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
In this study, the molecular structure of 4-(4-(trifluoromethoxy)phenoxy)phthalonitrile (1) has been elucidated and its supra-molecular dynamics have been revealed by the analysis of single crystal X-ray diffraction measurements.
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Affiliation(s)
- Armağan Günsel
- Department of Chemistry
- Sakarya University
- 54187 Esentepe
- Turkey
| | | | - Burak Tüzün
- Department of Chemistry
- Cumhuriyet University
- 58140 Sivas
- Turkey
| | - Hasan Pişkin
- Department of Physics
- Gebze Technical University
- 41400 Gebze
- Turkey
| | | | - Bayram Gündüz
- Department of Science Education
- Faculty of Education
- Muş Alparslan University
- 49250 Muş
- Turkey
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13
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Genc Bilgicli H, Taslimi P, Akyuz B, Tuzun B, Gulcin İ. Synthesis, characterization, biological evaluation, and molecular docking studies of some piperonyl‐based 4‐thiazolidinone derivatives. Arch Pharm (Weinheim) 2019; 353:e1900304. [DOI: 10.1002/ardp.201900304] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2019] [Revised: 10/30/2019] [Accepted: 11/15/2019] [Indexed: 01/20/2023]
Affiliation(s)
- Hayriye Genc Bilgicli
- Department of Chemistry, Faculty of Arts and SciencesSakarya University Servidan Sakarya Turkey
| | - Parham Taslimi
- Department of Biotechnology, Faculty of ScienceBartin University Bartin Turkey
| | - Busra Akyuz
- Department of Chemistry, Faculty of Arts and SciencesSakarya University Servidan Sakarya Turkey
| | - Burak Tuzun
- Department of Chemistry, Faculty of ScienceCumhuriyet University Sivas Turkey
| | - İlhami Gulcin
- Department of Chemistry, Faculty of SciencesAtaturk University Erzurum Turkey
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15
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Comparison of spectroscopic, electronic, theoretical, optical and surface morphological properties of functional manganese(III) phthalocyanine compounds for various conditions. J Mol Struct 2019. [DOI: 10.1016/j.molstruc.2019.05.045] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
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16
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Günsel A, Bilgiçli AT, Tüzün B, Pişkin H, Atmaca GY, Erdoğmuş A, Yarasir MN. Synthesis of tetra-substituted phthalocyanines bearing 2-(ethyl(m-tolyl)amino)ethanol: Computational and photophysicochemical studies. J Photochem Photobiol A Chem 2019. [DOI: 10.1016/j.jphotochem.2018.12.038] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
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17
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Selective chemosensor phthalocyanines for Pd2+ ions; synthesis, characterization, quantum chemical calculation, photochemical and photophysical properties. J Mol Struct 2019. [DOI: 10.1016/j.molstruc.2018.11.094] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
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18
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Günsel A, Bilgiçli AT, Pişkin H, Tüzün B, Yarasir MN, Gündüz B. Synthesis of non-peripherally tetra-substituted copper(ii) phthalocyanines: characterization, optical and surface properties, fabrication and photo-electrical properties of a photosensitive diode. Dalton Trans 2019; 48:14839-14852. [DOI: 10.1039/c9dt02868d] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
This study describes the synthesis and characterization of a non-peripherally tetra-substituted copper(ii) phthalocyanine bearing 4-(trifluoromethoxy)phenol groups.
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Affiliation(s)
- Armağan Günsel
- Department of Chemistry
- Sakarya University
- 54187 Esentepe
- Turkey
| | | | - Hasan Pişkin
- Department of Physics
- Gebze Technical University
- 41400 Gebze
- Turkey
| | - Burak Tüzün
- Department of Chemistry
- Cumhuriyet University
- 58140 Sivas
- Turkey
| | | | - Bayram Gündüz
- Department of Science Education
- Faculty of Education
- Muş Alparslan University
- 49250 Muş
- Turkey
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Güzel E, Günsel A, Tüzün B, Atmaca GY, Bilgiçli AT, Erdoğmuş A, Yarasir MN. Synthesis of tetra-substituted metallophthalocyanines: Spectral, structural, computational studies and investigation of their photophysical and photochemical properties. Polyhedron 2019. [DOI: 10.1016/j.poly.2018.10.072] [Citation(s) in RCA: 23] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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20
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Investigation of DNA–RNA Molecules for the Efficiency and Activity of Corrosion Inhibition by DFT and Molecular Docking. ACTA ACUST UNITED AC 2018. [DOI: 10.1007/s40735-018-0185-5] [Citation(s) in RCA: 27] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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