BODIPY-fused uracil: synthesis, photophysical properties, and applications

Fluorescent nucleobase and nucleic acid analogs are important tools in chemical and molecular biology as fluorescent labelling of nucleobases has applications in cellular imaging and anti-tumor activity. Boron-dipyrromethene (BODIPY) dyes exhibiting high brightness and good photostability are extensively used as fluorescent labelling agents and as type II photosensitizers for photodynamic therapy. Thus, the combination of nucleobases and BODIPY to obtain new compounds with both anti-tumor activity and fluorescent imaging functions is the focus of our research. We synthesized two new nucleobase analogs 1 and 2 by fusing the BODIPY core directly with uracil which resulted in favorable photophysical properties and high emission quantum efficiencies particularly in organic solvents. Further, we explored the newly synthesized derivatives, which possessed good singlet oxygen generation efficiencies and bio-compatibility, as potential PDT agents and our results show that they exhibit in vitro anti-tumor activities.

Organocatalytic atroposelective construction of axially chiral nonsymmetric biaryltriols and their applications in asymmetric synthesis and heavy metal ion detection

Organocatalytic atroposelective construction of axially chiral nonsymmetric biaryltriols and their applications in asymmetric synthesis and heavy metal ion detection.

A quinoline-based fluorescent chemosensor for palladium ion (Pd2+)-selective detection in aqueous solution

Quinoline-based fluorescent chemosensors have been extensively developed for various metal cations, but it was still rare for Pd²⁺-selective detection. In this work, a novel quinoline-benzimidazole conjugate containing one carboxylic acid group (QBM) was designed, and the QBM displayed highly selective fluorescence quenching response towards Pd²⁺ over other metal cations in aqueous solution. The fluorescence titration revealed a good linear relationship between the fluorescence intensity and the Pd²⁺ concentration in the range of 0.5-10 μmol L^-1, with the detection limit of 0.26 μmol L^-1 (S/N = 3). Fluorescence detection of Pd²⁺ in practical water sample was also successfully achieved.

A Boron Dipyrromethene-Based Fluorescence 'OFF-ON' Probe for Sensitive and Selective Detection of Palladium(II) Ions and Its Application in Live Cell Imaging

A novel boron dipyrromethene (BODIPY)-based fluorescent probe BDP-Pd was designed and synthesized. Upon coordination with Pd²⁺ , the emission of the probe at 508 nm significantly increased, showing an 'OFF-ON' fluorescence response. The complexation of BDP-Pd with Pd²⁺ in both acetonitrile and aqueous solution were then studied by absorption and fluorescence spectra. The binding stoichiometry between the probe and Pd²⁺ was found to be 1 : 2, and the binding constant was determined to be 8.5×10¹⁰  M^-2 and 8.2×10¹⁰  M^-2 in acetonitrile and aqueous solution, respectively. The probe exhibited a detection limit as low as 0.72 ppb toward Pd²⁺ with no obvious interference from up to 21 species of common metal ions, suggesting BDP-Pd as a sensitive and selective fluorescent probe for Pd²⁺ detection. The fast fluorescence 'OFF-ON' phenomenon of the probe upon coordination with Pd²⁺ ions could be easily observed by a hand-hold UV lamp under naked eye in solution as well as on homemade test trips. Density functional theory (DFT) calculations were carried out to give the optimized structure of complex BDP-Pd : 2Pd²⁺ and rationalize the detection mechanism through a prohibited intramolecular photoinduced electron transfer (PET) process. The bio-imaging application of the probe was investigated and it showed excellent cell permeability for fluorescent imaging of Pd²⁺ ions in A549 human non-small cell lung cancer cells.

A Time-Resolved Spectroscopic Investigation of a Novel BODIPY Copolymer and Its Potential Use as a Photosensitiser for Hydrogen Evolution

A novel 4,4-difuoro-4-bora-3a,4a-diaza-s-indacene (BODIPY) copolymer with diethynylbenzene has been synthesised, and its ability to act as a photosensitiser for the photocatalytic generation of hydrogen was investigated by time-resolved spectroscopic techniques spanning the ps- to ns-timescales. Both transient absorption and time-resolved infrared spectroscopy were used to probe the excited state dynamics of this photosensitising unit in a variety of solvents. These studies indicated how environmental factors can influence the photophysics of the BODIPY polymer. A homogeneous photocatalytic hydrogen evolution system has been developed using the BODIPY copolymer and cobaloxime which provides hydrogen evolution rates of 319 μmol h⁻¹ g⁻¹ after 24 h of visible irradiation.

Novel pyrene-pyridine oligomer nanorods for super-sensitive fluorescent detection of Pd2

Conjugated polymers (CPs) can be fabricated into conjugated polymer nanoparticles of various shapes, thus tuning the hydrophobicity and sensing performances of the parent polymers. Herein, two new hydrophobic oligomeric CPs containing pyrene-pyridyl moieties, P1 and P2, were directly prepared and conveniently converted into hydrophilic nanorods, i.e. P1NRs and P2NRs (about 4-21 and 6-20 nm in diameter), by a modified microemulsion method. Notably, separated P1NRs exhibit excellent stability while P2NRs tend to stack on each other perhaps due to their different rigidity of π-delocalized backbones, which may have a profound effect on their fluorescence properties. In addition, Pd²⁺ can coordinate with the pyridyl N atoms, thereby causing ultrasensitive fluorescence quenching of P1NRs and P2NRs owing to the aggregation of oligomeric CP nanorods. These two simple nanosensors can help to determine Pd²⁺ with detection limits as low as 1 and 70 nM, respectively. It is worth noting that biocompatible P1NRs with bright blue fluorescence can be employed for efficient imaging of trace level Pd²⁺ ions in live cells.

Cation-π induced lithium-doped conjugated microporous polymer with remarkable hydrogen storage performance

A cation-π induced lithium-doped conjugated microporous polymer, Li+-PTAT, was constructed. It was proved that the point to face cation-π interactions between Li+ and indole can endow the resulting Li+-PTAT with high Li+ content and without agglomeration, which further leads to its encouraging hydrogen storage capacity.

A novel carboxylic-functional indole-based aerogel for highly effective removal of heavy metals from aqueous solution via synergistic effects of face-point and point-point interactions

A new type of carboxylic-functional indole-based aerogel (CHIFA) has been successfully prepared via a facile sol–gel technology, which possessed a highly effective removal of heavy metals from aqueous solution through the synergistic effects of face–point and point–point interactions.

A new type of carboxylic-functional indole-based aerogel (CHIFA) has been successfully prepared, which possessed highly effective removal of heavy metals from aqueous solution through the synergistic effects of face–point and point–point interactions.

A recyclable indole-based polymer for trinitrotoluene adsorption via the synergistic effect of dipole–π and donor–acceptor interactions

A new type of indole-based porous organic polymer with amine units (PAIN) has been constructed, which possesses encouraging and effective adsorption properties for trinitrotoluene by taking advantage of the synergistic effect of dipole–π and donor–acceptor interactions.

A chemosensor with a paddle structure based on a BODIPY chromophore for sequential recognition of Cu2+ and HSO3−

In this study, a highly selective chemosensor ML based on a BODIPY fluorescent chromophore was synthesized for sequential recognition of Cu²⁺ and HSO₃⁻ in a CH₃OH/H₂O (99 : 1 v/v) system, which contained three recognition sites and its structure characterized by ¹H NMR, ¹³C NMR and ESI-HR-MS. The sensor ML showed an obvious “on–off” fluorescence quenching response toward Cu²⁺ and the ML-Cu²⁺ complex showed an “off–on” fluorescence enhancement response toward HSO₃⁻. The detection limit of the sensor ML was 0.36 μM to Cu²⁺ and 1.4 μM to HSO₃⁻. In addition, the sensor ML showed a 1 : 3 binding stoichiometry to Cu²⁺ and the recovery rate of ML-Cu²⁺ complex identifying HSO₃⁻ could be over 70%. Sensor ML showed remarkable detection ability in a pH range of 4–8.

A highly selective chemosensor based on a BODIPY chromophore for sequential recognition of Cu²⁺ and HSO₃⁻.

A reversible, colorimetric, pH-responsive indole-based hydrogel and its application in urea detection

A new type of pH-responsive indole-based (4-HINF) hydrogel, fabricated by a sol–gel method, was utilized as a platform for colorimetric detection of urea in aqueous solution. The colorimetric sensor was established by virtue of the synergistic effect of cation–π interaction and hydrogen bonding with good regenerative ability. The results exhibited linear response in the range of 0–10 mM with a limit of detection of 10 μM. The prepared 4-HINF hydrogel possessed high selectivity to pH change under complicated environments ensuring further applications in environmental and bio-systems.

A new type of pH-responsive indole-based (4-HINF) hydrogel, fabricated by a sol–gel method, was utilized as a platform for colorimetric detection of urea in aqueous solution.

A novel and effective benzo[d]thiazole-based fluorescent probe with dual recognition factors for highly sensitive and selective imaging of cysteine in vitro and in vivo

Double recognition groups significantly improved the selectivity of a fluorescent probe to Cys in living cells.

Renewable 4-HIF/NaOH aerogel for efficient methylene blue removal via cation–π interaction induced electrostatic interaction

A novel porous organic material 4-hydroxyindole-formaldehyde/NaOH (4-HIF/NaOH) aerogel was prepared via a facile polymerization, soaking in NaOH aqueous solution and ambient drying method. 4-HIF/NaOH aerogel porous polymer networks with high surface area have been applied as efficient adsorbents to remove methylene blue from wastewater via synergistic effects of cation–π interaction induced electrostatic interaction, electrostatic interaction and π–π interaction. The adsorption capacity calculated by adsorption isotherms at 303 K was 1016.9 mg g⁻¹ which is higher than those observed for methylene blue on other aerogels and most other materials. Furthermore, the methylene blue loaded 4-HIF aerogel can easily be regenerated with 0.1 M HCl solution and ethanol wash, retaining over 75% of the adsorption capacity after recycling five times.

A novel porous organic material 4-hydroxyindole-formaldehyde/NaOH (4-HIF/NaOH) aerogel was prepared via a facile polymerization, soaking in NaOH aqueous solution and ambient drying method.