Self-assembly of conformationally flexible molecules under 2D confinement: structural analysis from computer simulations

Topology selectivity of a conformationally flexible precursor through selenium doping

Conformational arrangements within nanostructures play a crucial role in shaping the overall configuration and determining the properties, for example in covalent/metal organic frameworks. In on-surface synthesis, conformational diversity often leads to uncontrollable or disordered structures. Therefore, the exploration of controlling and directing the conformational arrangements is significant in achieving desired nanoarchitectures. Herein, a conformationally flexible precursor 2,4,6-tris(3-bromophenyl)-1,3,5-triazine is employed, and a random phase consisting of C3h and Cs conformers is firstly obtained after deposition of the precursor on Cu(111) at room temperature to 365 K. At low coverage (0.01 ML) selenium doping, we achieve the selectivity of the C3h conformer and improve the nanopore structural homogeneity. The ordered two-dimensional metal organic nanostructure can be fulfilled by selenium doping from room temperature to 365 K. The formation of the conformationally flexible precursor on Cu(111) is explored through the combination of high-resolution scanning tunneling microscopy and non-contact atomic force microscopy. The regulation of energy diagrams in the absence or presence of the Se atom is revealed by density functional theory calculations. These results can enrich the on-surface synthesis toolbox of conformationally flexible precursors, for the design of complex nanoarchitectures, and for future development of engineered nanomaterials.

Theoretical modeling of the metal-organic precursors of anthracene-based covalent networks on surfaces

Surface-assisted fabrication of molecular network architectures has been a promising route to low-dimensional materials with unique physicochemical properties and functionalities. One versatile way in this field is the Ullmann coupling reaction of halogenated organic monomers on catalytically active metallic surfaces. In this work, using the coarse grained Monte Carlo simulations, we studied the on-surface self-assembly of metal-organic precursors preceding the covalent Ullman-type linkage of tetrahalogenated anthracene building blocks. To that end a series of positional isomers was examined and classified with respect to their ability of creation of extended network structures. Our simulations focused on the identification of basic types of self-assembly scenarios distinguishing enantiopure and racemic systems and producing periodic and aperiodic networks. The calculations carried out for selected tectons demonstrated wide possibilities of controlling porosity (e.g. pore size, shape, periodicity, chirality, heterogeneity) of the networks by suitable functionalization of the monomeric unit. The findings reported here can be helpful in rational designing of 2D polymeric networks with predefined structures and properties.

On-Surface Synthesis of Porous Carbon Nanoribbons on Silver: Reaction Kinetics and the Influence of the Surface Structure

We report on the influence of the surface structure and the reaction kinetics in the bottom-up fabrication of porous nanoribbons on silver surfaces using low-temperature scanning tunneling microscopy. The porous carbon nanoribbons are fabricated by the polymerization of 1,3,5-tris(3-bromophenyl)benzene directly on the Ag surface using an Ullmann-type reaction in combination with dehydrogenative coupling reactions. We demonstrate the successful on-surface synthesis of porous nanoribbons on Ag(111) and Ag(100) even though the self-assemblies of the intermediate organometallic structures and covalently-linked polymer chains are different on both surfaces. Furthermore, we present the formation of isolated porous nanoribbons by kinetic control. Our results give valuable insights into the role of substrate-induced templating effects and the reaction kinetics in the on-surface synthesis of conformationally flexible molecules.