1
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Scheiner S, Michalczyk M, Zierkiewicz W. Influence of Internal Angular Arrangement on Pnicogen Bond Strength. Inorg Chem 2023. [PMID: 38016913 DOI: 10.1021/acs.inorgchem.3c03141] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2023]
Abstract
The three Z-X covalent bonds of a ZX3 unit (Z = P, As, Sb, Bi) are normally arranged in a pyramidal structure. Quantum chemical calculations show that pnicogen bonds (ZBs) to the central Z are weakened if ZX3 is flattened, as in the opening of an umbrella. The partial closing of the umbrella has the opposite effect of substantially strengthening these ZBs, even amounting to a 2- or 3-fold magnification in certain cases. The strongest such bonds, wherein Sb and Bi are in a strained configuration within a ZO3CH model system, have interaction energies of 20 kcal/mol with an NH3 base. Most of these systems, whether flattened or more pyramidal, are capable of engaging in three ZBs simultaneously, despite a certain amount of negative cooperativity.
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Affiliation(s)
- Steve Scheiner
- Department of Chemistry and Biochemistry, Utah State University, Logan, Utah 84322-0300, United States
| | - Mariusz Michalczyk
- Faculty of Chemistry, Wrocław University of Science and Technology, Wybrzeże Wyspiańskiego 27, 50-370 Wrocław, Poland
| | - Wiktor Zierkiewicz
- Faculty of Chemistry, Wrocław University of Science and Technology, Wybrzeże Wyspiańskiego 27, 50-370 Wrocław, Poland
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2
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Beckmann JL, Krieft J, Vishnevskiy YV, Neumann B, Stammler HG, Mitzel NW. A Bidentate Antimony Pnictogen Bonding Host System. Angew Chem Int Ed Engl 2023; 62:e202310439. [PMID: 37773008 DOI: 10.1002/anie.202310439] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2023] [Revised: 09/27/2023] [Accepted: 09/27/2023] [Indexed: 09/30/2023]
Abstract
A bidentate pnictogen bonding host-system based on 1,8-diethynylanthracene was synthesized by a selective tin-antimony exchange reaction and investigated regarding its ability to act as a Lewis acidic host component for the complexation of Lewis basic or anionic guests. In this work, the novel C≡C-Sb(C2 F5 )2 unit was established to study the potential of antimony(III) sites as representatives for the scarcely explored pnictogen bonding donors. The capability of this partly fluorinated host system was investigated towards halide anions (Cl- , Br- , I- ), dimethyl chalcogenides Me2 Y (Y=O, S, Se, Te), and nitrogen heterocycles (pyridine, pyrimidine). Insights into the adduct formation behavior as well as the bonding situation of such E⋅⋅⋅Sb-CF moieties were obtained in solution by means of NMR spectroscopy, in the solid state by X-ray diffraction, by elemental analyses, and by computational methods (DFT, QTAIM, IQA), respectively.
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Affiliation(s)
- J Louis Beckmann
- Chair of Inorganic and Structural Chemistry, Center for Molecular Materials CM2 Faculty of Chemistry, Bielefeld University, Universitätsstrasse 25, 33615, Bielefeld, Germany
| | - Jonas Krieft
- Chair of Inorganic and Structural Chemistry, Center for Molecular Materials CM2 Faculty of Chemistry, Bielefeld University, Universitätsstrasse 25, 33615, Bielefeld, Germany
| | - Yury V Vishnevskiy
- Chair of Inorganic and Structural Chemistry, Center for Molecular Materials CM2 Faculty of Chemistry, Bielefeld University, Universitätsstrasse 25, 33615, Bielefeld, Germany
| | - Beate Neumann
- Chair of Inorganic and Structural Chemistry, Center for Molecular Materials CM2 Faculty of Chemistry, Bielefeld University, Universitätsstrasse 25, 33615, Bielefeld, Germany
| | - Hans-Georg Stammler
- Chair of Inorganic and Structural Chemistry, Center for Molecular Materials CM2 Faculty of Chemistry, Bielefeld University, Universitätsstrasse 25, 33615, Bielefeld, Germany
| | - Norbert W Mitzel
- Chair of Inorganic and Structural Chemistry, Center for Molecular Materials CM2 Faculty of Chemistry, Bielefeld University, Universitätsstrasse 25, 33615, Bielefeld, Germany
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3
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Demicheli C, Vallejos VMR, Lanza JS, Ramos GS, Do Prado BR, Pomel S, Loiseau PM, Frézard F. Supramolecular assemblies from antimony(V) complexes for the treatment of leishmaniasis. Biophys Rev 2023; 15:751-765. [PMID: 37681109 PMCID: PMC10480371 DOI: 10.1007/s12551-023-01073-6] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2023] [Accepted: 05/30/2023] [Indexed: 09/09/2023] Open
Abstract
The pentavalent meglumine antimoniate (MA) is still a first-line drug in the treatment of leishmaniasis in several countries. As an attempt to elucidate its mechanism of action and develop new antimonial drugs with improved therapeutic profile, Sb(V) complexes with different ligands, including β-cyclodextrin (β-CD), nucleosides and non-ionic surfactants, have been studied. Interestingly, Sb(V) oxide, MA, its complex with β-CD, Sb(V)-guanosine complex and amphiphilic Sb(V) complexes with N-alkyl-N-methylglucamide, have shown marked tendency to self-assemble in aqueous solutions, forming nanoaggregates, hydrogel or micelle-like nanoparticles. Surprisingly, the resulting assemblies presented in most cases slow dissociation kinetics upon dilution and a strong influence of pH, which impacted on their pharmacokinetic and therapeutic properties against leishmaniasis. To explain this unique property, we raised the hypothesis that multiple pnictogen bonds could contribute to the formation of these assemblies and their kinetic of dissociation. The present article reviews our current knowledge on the structural organization and physicochemical characteristics of Sb-based supramolecular assemblies, as well as their pharmacological properties and potential for treatment of leishmaniasis. This review supports the feasibility of the rational design of new Sb(V) complexes with supramolecular assemblies for the safe and effective treatment of leishmaniasis.
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Affiliation(s)
- Cynthia Demicheli
- Department of Chemistry, Institute of Exact Sciences, Universidade Federal de Minas Gerais, Belo Horizonte, MG 31270-901 Brazil
| | - Virgínia M. R. Vallejos
- Department of Physiology and Biophysics, Institute of Biological Sciences, Universidade Federal de Minas Gerais, Belo Horizonte, MG 31270-901 Brazil
| | | | - Guilherme S. Ramos
- Department of Physiology and Biophysics, Institute of Biological Sciences, Universidade Federal de Minas Gerais, Belo Horizonte, MG 31270-901 Brazil
| | - Bruno R. Do Prado
- Department of Chemistry, Institute of Exact Sciences, Universidade Federal de Minas Gerais, Belo Horizonte, MG 31270-901 Brazil
| | - Sébastien Pomel
- Faculty of Pharmacy, Antiparasite Chemotherapy (PARACHEM), UMR 8076 CNRS BioCIS, University Paris-Saclay, 91400 Orsay, France
| | - Philippe M. Loiseau
- Faculty of Pharmacy, Antiparasite Chemotherapy (PARACHEM), UMR 8076 CNRS BioCIS, University Paris-Saclay, 91400 Orsay, France
| | - Frédéric Frézard
- Department of Physiology and Biophysics, Institute of Biological Sciences, Universidade Federal de Minas Gerais, Belo Horizonte, MG 31270-901 Brazil
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4
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Chishiro A, Akioka I, Sumida A, Oka K, Tohnai N, Yumura T, Imoto H, Naka K. Tetrachlorocatecholates of triarylarsines as a novel class of Lewis acids. Dalton Trans 2022; 51:13716-13724. [PMID: 36004500 DOI: 10.1039/d2dt02145e] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Pnictogen-mediated Lewis acidity is an emerging research subject in organic chemistry, supramolecular chemistry, etc. In contrast to the extensive studies on phosphorus and antimony, the diversity of arsenic-Lewis acids was quite limited. Herein, tetrachlorocatecholates of triarylarsines were newly synthesized. Their structures, electronic properties, and Lewis acidities were experimentally and computationally examined and compared with the corresponding phosphorus and antimony analogs. This is the first systematic study on the relationship between the structure and Lewis acidity of arsenic-mediated Lewis acids.
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Affiliation(s)
- Akane Chishiro
- Faculty of Molecular Chemistry and Engineering, Graduate School of Science and Technology, Kyoto Institute of Technology, Goshokaido-cho, Matsugasaki, Sakyo-ku, Kyoto 606-8585, Japan.
| | - Ippei Akioka
- Faculty of Molecular Chemistry and Engineering, Graduate School of Science and Technology, Kyoto Institute of Technology, Goshokaido-cho, Matsugasaki, Sakyo-ku, Kyoto 606-8585, Japan.
| | - Akifumi Sumida
- Faculty of Molecular Chemistry and Engineering, Graduate School of Science and Technology, Kyoto Institute of Technology, Goshokaido-cho, Matsugasaki, Sakyo-ku, Kyoto 606-8585, Japan.
| | - Kouki Oka
- Center for Future Innovation (Cfi) and Department of Applied Chemistry, Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka 565-0871, Japan
| | - Norimitsu Tohnai
- Center for Future Innovation (Cfi) and Department of Applied Chemistry, Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka 565-0871, Japan
| | - Takashi Yumura
- Faculty of Material Science and Technology, Graduate School of Science and Technology, Kyoto Institute of Technology, Goshokaido-cho, Matsugasaki, Sakyo-ku, Kyoto 606-8585, Japan
| | - Hiroaki Imoto
- Faculty of Molecular Chemistry and Engineering, Graduate School of Science and Technology, Kyoto Institute of Technology, Goshokaido-cho, Matsugasaki, Sakyo-ku, Kyoto 606-8585, Japan.
| | - Kensuke Naka
- Faculty of Molecular Chemistry and Engineering, Graduate School of Science and Technology, Kyoto Institute of Technology, Goshokaido-cho, Matsugasaki, Sakyo-ku, Kyoto 606-8585, Japan. .,Materials Innovation Lab, Kyoto Institute of Technology, Goshokaido-cho, Matsugasaki, Sakyo-ku, Kyoto 606-8585, Japan
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5
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Ravat P, Uchida H, Sekine R, Kamei K, Yamamoto A, Konovalov O, Tanaka M, Yamada T, Harano K, Nakamura E. De Novo Synthesis of Free-Standing Flexible 2D Intercalated Nanofilm Uniform over Tens of cm 2. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2022; 34:e2106465. [PMID: 34651356 DOI: 10.1002/adma.202106465] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/17/2021] [Revised: 09/12/2021] [Indexed: 06/13/2023]
Abstract
Of a variety of intercalated materials, 2D intercalated systems have attracted much attention both as materials per se, and as a platform to study atoms and molecules confined among nanometric layers. High-precision fabrication of such structures has, however, been a difficult task using the conventional top-down and bottom-up approaches. The de novo synthesis of a 3-nm-thick nanofilm intercalating a hydrogen-bonded network between two layers of fullerene molecules is reported here. The two-layered film can be further laminated into a multiply film either in situ or by sequential lamination. The 3 nm film forms uniformly over an area of several tens of cm2 at an air/water interface and can be transferred to either flat or perforated substrates. A free-standing film in air prepared by transfer to a gold comb electrode shows proton conductivity up to 1.4 × 10-4 S cm-1 . Electron-dose-dependent reversible bending of a free-standing 6-nm-thick nanofilm hung in a vacuum is observed under electron beam irradiation.
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Affiliation(s)
- Prince Ravat
- Department of Chemistry, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-0033, Japan
| | - Hikaru Uchida
- Department of Chemistry, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-0033, Japan
| | - Ryosuke Sekine
- Department of Chemistry, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-0033, Japan
| | - Ko Kamei
- Department of Chemistry, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-0033, Japan
| | - Akihisa Yamamoto
- Center for Integrative Medicine and Physics, Institute for Advanced Study, Kyoto University, Kyoto, 606-8501, Japan
| | - Oleg Konovalov
- European Synchrotron Radiation Facility, Grenoble, 38043, France
| | - Motomu Tanaka
- Center for Integrative Medicine and Physics, Institute for Advanced Study, Kyoto University, Kyoto, 606-8501, Japan
- Physical Chemistry of Biosystems, Institute of Physical Chemistry, Heidelberg University, Heidelberg, 69120, Germany
| | - Teppei Yamada
- Department of Chemistry, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-0033, Japan
| | - Koji Harano
- Department of Chemistry, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-0033, Japan
| | - Eiichi Nakamura
- Department of Chemistry, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-0033, Japan
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6
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Humeniuk H, Gini A, Hao X, Coelho F, Sakai N, Matile S. Pnictogen-Bonding Catalysis and Transport Combined: Polyether Transporters Made In Situ. JACS AU 2021; 1:1588-1593. [PMID: 34723261 PMCID: PMC8549043 DOI: 10.1021/jacsau.1c00345] [Citation(s) in RCA: 27] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/10/2021] [Indexed: 05/16/2023]
Abstract
The combination of catalysis and transport across lipid bilayer membranes promises directional access to a solvent-free and structured nanospace that could accelerate, modulate, and, at best, enable new chemical reactions. To elaborate on these expectations, anion transport and catalysis with pnictogen and tetrel bonds are combined with polyether cascade cyclizations into bioinspired cation transporters. Characterized separately, synergistic anion and cation transporters of very high activity are identified. Combined for catalysis in membranes, cascade cyclizations are found to occur with a formal rate enhancement beyond one million compared to bulk solution and product formation is detected in situ as an increase in transport activity. With this operational system in place, intriguing perspectives open up to exploit all aspects of this unique nanospace for important chemical transformations.
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7
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8
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Moaven S, Watson BT, Polaske TJ, Karl BM, Unruh DK, Bowling NP, Cozzolino AF. Self-Assembly of Complementary Components Using a Tripodal Bismuth Compound: Pnictogen Bonding or Coordination Chemistry? Inorg Chem 2021; 60:11242-11250. [DOI: 10.1021/acs.inorgchem.1c01232] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
- Shiva Moaven
- Department of Chemistry and Biochemistry, Texas Tech University, 1204 Boston Avenue, Lubbock, Texas 79409-1061, United States
| | - Brandon T. Watson
- Department of Chemistry and Biochemistry, Texas Tech University, 1204 Boston Avenue, Lubbock, Texas 79409-1061, United States
| | - Thomas J. Polaske
- Department of Chemistry, University of Wisconsin—Stevens Point, 2101 Fourth Avenue, Stevens Point, Wisconsin 54481, United States
| | - Brian M. Karl
- Department of Chemistry, University of Wisconsin—Stevens Point, 2101 Fourth Avenue, Stevens Point, Wisconsin 54481, United States
| | - Daniel K. Unruh
- Department of Chemistry and Biochemistry, Texas Tech University, 1204 Boston Avenue, Lubbock, Texas 79409-1061, United States
| | - Nathan P. Bowling
- Department of Chemistry, University of Wisconsin—Stevens Point, 2101 Fourth Avenue, Stevens Point, Wisconsin 54481, United States
| | - Anthony F. Cozzolino
- Department of Chemistry and Biochemistry, Texas Tech University, 1204 Boston Avenue, Lubbock, Texas 79409-1061, United States
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9
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Zhang J, Wei J, Ding WY, Li S, Xiang SH, Tan B. Asymmetric Pnictogen-Bonding Catalysis: Transfer Hydrogenation by a Chiral Antimony(V) Cation/Anion Pair. J Am Chem Soc 2021; 143:6382-6387. [PMID: 33904724 DOI: 10.1021/jacs.1c02808] [Citation(s) in RCA: 24] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
Pnictogen-bonding catalysis based on σ-hole interactions has recently attracted the attention of synthetic chemists. As a proof-of-concept for asymmetric pnictogen-bonding catalysis, we report herein an enantioselective transfer hydrogenation of benzoxazines catalyzed by a novel chiral antimony cation/anion pair. The chiral pnictogen catalyst library could be rapidly accessed from triarylstibine with readily available mandelic acid analogues, and the catalyst displays remarkable efficiency and enantiocontrol potency even at 0.05 mol % loading. Moreover, the properties of the catalyst and the mechanistic insights have been investigated by nonlinear effect studies, 1H NMR, LC-MS, and control experiments.
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Affiliation(s)
- Jian Zhang
- School of Chemistry and Chemical Engineering, Harbin Institute of Technology, Harbin 150001, China.,Shenzhen Grubbs Institute, Department of Chemistry, Southern University of Science and Technology, Shenzhen 518055, China
| | - Jun Wei
- Shenzhen Grubbs Institute, Department of Chemistry, Southern University of Science and Technology, Shenzhen 518055, China
| | - Wei-Yi Ding
- Shenzhen Grubbs Institute, Department of Chemistry, Southern University of Science and Technology, Shenzhen 518055, China
| | - Shaoyu Li
- Shenzhen Grubbs Institute, Department of Chemistry, Southern University of Science and Technology, Shenzhen 518055, China.,Academy for Advanced Interdisciplinary Studies, Southern University of Science and Technology, Shenzhen 518055, China
| | - Shao-Hua Xiang
- Shenzhen Grubbs Institute, Department of Chemistry, Southern University of Science and Technology, Shenzhen 518055, China.,Academy for Advanced Interdisciplinary Studies, Southern University of Science and Technology, Shenzhen 518055, China
| | - Bin Tan
- Shenzhen Grubbs Institute, Department of Chemistry, Southern University of Science and Technology, Shenzhen 518055, China
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10
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CO2 and photo-controlled reversible conversion of supramolecular assemblies based on water soluble pillar[5]arene and coumarin-containing guest. CHINESE CHEM LETT 2021. [DOI: 10.1016/j.cclet.2020.03.058] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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11
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Mokrai R, Barrett J, Apperley DC, Benkő Z, Heift D. Tweaking the Charge Transfer: Bonding Analysis of Bismuth(III) Complexes with a Flexidentate Phosphane Ligand. Inorg Chem 2020; 59:8916-8924. [PMID: 32530279 PMCID: PMC7467670 DOI: 10.1021/acs.inorgchem.0c00734] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2020] [Indexed: 11/28/2022]
Abstract
To account for the charge transfer and covalent character in bonding between P and Bi centers, the electronic structures of [P(C6H4-o-CH2SCH3)3BiCln](3-n)+ (n = 0-3) model species have been investigated computationally. On the basis of this survey a synthetic target compound with a dative P→Bi bond has been selected. Consecutively, the highly reactive bismuth cage [P(C6H4-o-CH2SCH3)3Bi]3+ has been accessed experimentally and characterized. Importantly, our experiments (single-crystal X-ray diffraction and solid-state NMR spectroscopy) and computations (NBO and AIM analysis) reveal that the P···Bi bonding in this trication can be described as a dative bond. Here we have shown that our accordion-like molecular framework allows for tuning of the interaction between P and Bi centers.
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Affiliation(s)
- Réka Mokrai
- Budapest University
of Technology and Economics, H-1111 Budapest, Hungary
| | - Jamie Barrett
- Department of Chemistry, Durham
University, DH1 3LE Durham, United Kingdom
| | - David C. Apperley
- Department of Chemistry, Durham
University, DH1 3LE Durham, United Kingdom
| | - Zoltán Benkő
- Budapest University
of Technology and Economics, H-1111 Budapest, Hungary
| | - Dominikus Heift
- Department of Chemistry, Durham
University, DH1 3LE Durham, United Kingdom
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12
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Gini A, Paraja M, Galmés B, Besnard C, Poblador-Bahamonde AI, Sakai N, Frontera A, Matile S. Pnictogen-bonding catalysis: brevetoxin-type polyether cyclizations. Chem Sci 2020; 11:7086-7091. [PMID: 33250977 PMCID: PMC7690316 DOI: 10.1039/d0sc02551h] [Citation(s) in RCA: 47] [Impact Index Per Article: 11.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/05/2020] [Accepted: 06/17/2020] [Indexed: 12/30/2022] Open
Abstract
This study marks chemical space available for pnictogen-bonding catalysis, and demonstrates that reactivity accessible in this space is unique.
Pnictogen-bond donors are attractive for use in catalysis because of deep σ holes, high multivalency, rich hypervalency, and chiral binding pockets. We here report natural product inspired epoxide-opening polyether cyclizations catalyzed by fluoroarylated Sb(v) > Sb(iii) > Bi > Sn > Ge. The distinctive characteristic found for pnictogen-bonding catalysis is the breaking of the Baldwin rules, that is selective endo cyclization into the trans-fused ladder oligomers known from the brevetoxins. Moreover, tris(3,4,5-trifluorophenyl)stibines and their hypervalent stiborane catecholates afford different anti-Baldwin stereoselectivity. Lewis (SbCl3), Brønsted (AcOH) and π acids fail to provide similar access to these forbidden rings. Like hydrogen-bonding catalysis differs from Brønsted acid catalysis, pnictogen-bonding catalysis thus emerges as the supramolecular counterpart of covalent Lewis acid catalysis.
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Affiliation(s)
- Andrea Gini
- Department of Organic Chemistry , University of Geneva , Geneva , Switzerland . ; http://www.unige.ch/sciences/chiorg/matile/ ; Tel: +41 22 379 6523
| | - Miguel Paraja
- Department of Organic Chemistry , University of Geneva , Geneva , Switzerland . ; http://www.unige.ch/sciences/chiorg/matile/ ; Tel: +41 22 379 6523
| | - Bartomeu Galmés
- Department de Química , Universitat de les Illes Balears , Palma de Mallorca , Spain
| | - Celine Besnard
- Department of Organic Chemistry , University of Geneva , Geneva , Switzerland . ; http://www.unige.ch/sciences/chiorg/matile/ ; Tel: +41 22 379 6523
| | - Amalia I Poblador-Bahamonde
- Department of Organic Chemistry , University of Geneva , Geneva , Switzerland . ; http://www.unige.ch/sciences/chiorg/matile/ ; Tel: +41 22 379 6523
| | - Naomi Sakai
- Department of Organic Chemistry , University of Geneva , Geneva , Switzerland . ; http://www.unige.ch/sciences/chiorg/matile/ ; Tel: +41 22 379 6523
| | - Antonio Frontera
- Department de Química , Universitat de les Illes Balears , Palma de Mallorca , Spain
| | - Stefan Matile
- Department of Organic Chemistry , University of Geneva , Geneva , Switzerland . ; http://www.unige.ch/sciences/chiorg/matile/ ; Tel: +41 22 379 6523
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13
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Moaven S, Watson BT, Thompson SB, Lyons VJ, Unruh DK, Casadonte DJ, Pappas D, Cozzolino AF. Self-assembly of reversed bilayer vesicles through pnictogen bonding: water-stable supramolecular nanocontainers for organic solvents. Chem Sci 2020; 11:4374-4380. [PMID: 33224458 PMCID: PMC7659706 DOI: 10.1039/d0sc00206b] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2020] [Accepted: 04/09/2020] [Indexed: 12/21/2022] Open
Abstract
A new air and moisture stable antimony thiolate compound has been prepared that spontaneously forms stable hollow vesicles. Structural data reveals that pnictogen bonding drives the self-assembly of these molecules into a reversed bilayer. The ability to make these hollow, spherical, and chemically and temporally stable vesicles that can be broken and reformed by sonication allows these systems to be used for encapsulation and compartmentalisation in organic media. This was demonstrated through the encapsulation and characterization of several small organic reporter molecules.
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Affiliation(s)
- Shiva Moaven
- Department of Chemistry and Biochemistry , Texas Tech University , Box 41061 , Lubbock , Texas 79409-1061 , USA .
| | - Brandon T Watson
- Department of Chemistry and Biochemistry , Texas Tech University , Box 41061 , Lubbock , Texas 79409-1061 , USA .
| | - Shelby B Thompson
- Department of Chemistry and Biochemistry , Texas Tech University , Box 41061 , Lubbock , Texas 79409-1061 , USA .
| | - Veronica J Lyons
- Department of Chemistry and Biochemistry , Texas Tech University , Box 41061 , Lubbock , Texas 79409-1061 , USA .
| | - Daniel K Unruh
- Department of Chemistry and Biochemistry , Texas Tech University , Box 41061 , Lubbock , Texas 79409-1061 , USA .
| | - Dominick J Casadonte
- Department of Chemistry and Biochemistry , Texas Tech University , Box 41061 , Lubbock , Texas 79409-1061 , USA .
| | - Dimitri Pappas
- Department of Chemistry and Biochemistry , Texas Tech University , Box 41061 , Lubbock , Texas 79409-1061 , USA .
| | - Anthony F Cozzolino
- Department of Chemistry and Biochemistry , Texas Tech University , Box 41061 , Lubbock , Texas 79409-1061 , USA .
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14
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Moaven S, Andrews MC, Polaske TJ, Karl BM, Unruh DK, Bosch E, Bowling NP, Cozzolino AF. Triple-Pnictogen Bonding as a Tool for Supramolecular Assembly. Inorg Chem 2019; 58:16227-16235. [PMID: 31718176 DOI: 10.1021/acs.inorgchem.9b02761] [Citation(s) in RCA: 29] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
Supramolecular assembly utilizing simultaneous formation of three pnictogen bonds around a single antimony vertex was explored via X-ray crystallography, solution NMR, and computational chemistry. An arylethynyl (AE) ligand was designed to complement the three electrophilic regions around the Sb compound. Though solution studies reveal large binding constants for individual pyridyl units with the Sb donor, the rigidity and prearrangement of the AE acceptor proved necessary to achieve simultaneous binding of three acceptors to the Sb-centered pnictogen-bond donor. Calculations and X-ray structures suggest that negative cooperativity upon sequential binding of three acceptors to a Sb center limits the utility of triple-pnictogen bonding pyridyl acceptors. These limitations can be negated, however, when positive cooperativity is designed into a complementary acceptor ligand.
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Affiliation(s)
- Shiva Moaven
- Department of Chemistry and Biochemistry , Texas Tech University , 1204 Boston Avenue , Lubbock , Texas 79409-1061 , United States
| | - Miranda C Andrews
- Department of Chemistry and Biochemistry , Texas Tech University , 1204 Boston Avenue , Lubbock , Texas 79409-1061 , United States
| | - Thomas J Polaske
- Department of Chemistry , University of Wisconsin-Stevens Point , 2101 Fourth Avenue , Stevens Point , Wisconsin 54481 , United States
| | - Brian M Karl
- Department of Chemistry , University of Wisconsin-Stevens Point , 2101 Fourth Avenue , Stevens Point , Wisconsin 54481 , United States
| | - Daniel K Unruh
- Department of Chemistry and Biochemistry , Texas Tech University , 1204 Boston Avenue , Lubbock , Texas 79409-1061 , United States
| | - Eric Bosch
- Chemistry Department , Missouri State University , 901 S. National Ave. , Springfield , Missouri 65897 , United States
| | - Nathan P Bowling
- Department of Chemistry , University of Wisconsin-Stevens Point , 2101 Fourth Avenue , Stevens Point , Wisconsin 54481 , United States
| | - Anthony F Cozzolino
- Department of Chemistry and Biochemistry , Texas Tech University , 1204 Boston Avenue , Lubbock , Texas 79409-1061 , United States
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Mokrai R, Barrett J, Apperley DC, Batsanov AS, Benkő Z, Heift D. Weak Pnictogen Bond with Bismuth: Experimental Evidence Based on Bi-P Through-Space Coupling. Chemistry 2019; 25:4017-4024. [PMID: 30680824 PMCID: PMC6593703 DOI: 10.1002/chem.201900266] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2019] [Indexed: 12/21/2022]
Abstract
To study pnictogen bonding involving bismuth, flexible accordion-like molecular complexes of the composition [P(C6 H4 -o-CH2 SCH3 )3 BiX3 ], (X=Cl, Br, I) have been synthesised and characterised. The strength of the weak and mainly electrostatic interaction between the Bi and P centres strongly depends on the character of the halogen substituent on bismuth, which is confirmed by single-crystal X-ray diffraction analyses, DFT and ab initio computations. Significantly, 209 Bi-31 P through-space coupling (J=2560 Hz) is observed in solid-state 31 P NMR spectra, which is so far unprecedented in the literature, delivering direct information on the magnitude of this pnictogen interaction.
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Affiliation(s)
- Réka Mokrai
- Budapest University of Technology and EconomicsH-1111BudapestHungary
| | - Jamie Barrett
- Department of ChemistryDurham UniversityDH1 3LEDurhamUK
| | | | | | - Zoltán Benkő
- Budapest University of Technology and EconomicsH-1111BudapestHungary
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Leroy C, Johannson R, Bryce DL. 121/123Sb Nuclear Quadrupole Resonance Spectroscopy: Characterization of Non-Covalent Pnictogen Bonds and NQR Crystallography. J Phys Chem A 2019; 123:1030-1043. [PMID: 30633524 DOI: 10.1021/acs.jpca.8b11490] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Pnictogen (or pnicogen) bonding is an attractive interaction between the electrophilic region of group 15 elements (N, P, As, Sb, Bi) and a nucleophile. This interaction for which unique applications in catalysis have recently been uncovered continues to gain popularity. Here, we investigate a series of pnictogen-bonded cocrystals based on SbF3 and SbCl3, prepared via mechanochemical ball milling, with 121/123Sb ( I = 5/2 and 7/2, respectively) nuclear quadrupole resonance (NQR) spectroscopy. Observed NQR frequency shifts upon cocrystallization are on the order of 0.1 to 10 MHz and are clearly diagnostic of the formation of pnictogen bonds to antimony. Further evidence for pnictogen bonding is obtained by complementary 13C cross-polarization magic-angle spinning solid-state NMR experiments. DFT calculations of NMR parameters as well as natural localized molecular orbital analyses support the experimental findings and elucidate the electronic origins of the experimental NQR frequency shifts. This work provides insights into the changes in the antimony quadrupolar coupling constant upon pnictogen bonding: strikingly, the decreases noted here parallel those known for hydrogen bonds, but contrast with the increases reported for halogen bonds. The utility of the observed antimony nuclear quadrupolar coupling constants in constraining structural models of cocrystals for which diffraction-based structures are unavailable, i.e., a rudimentary implementation of NQR crystallography, is established. Overall, this work offers a new approach to understand emerging classes of electrophilic interactions and to contextualize them in the broader landscape of established chemical bonding paradigms.
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Affiliation(s)
- César Leroy
- Department of Chemistry and Biomolecular Sciences & Centre for Catalysis Research and Innovation , University of Ottawa , 10 Marie Curie Private , Ottawa , Ontario K1N 6N5 Canada
| | - Ryan Johannson
- Department of Chemistry and Biomolecular Sciences & Centre for Catalysis Research and Innovation , University of Ottawa , 10 Marie Curie Private , Ottawa , Ontario K1N 6N5 Canada
| | - David L Bryce
- Department of Chemistry and Biomolecular Sciences & Centre for Catalysis Research and Innovation , University of Ottawa , 10 Marie Curie Private , Ottawa , Ontario K1N 6N5 Canada
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Lee LM, Tsemperouli M, Poblador-Bahamonde AI, Benz S, Sakai N, Sugihara K, Matile S. Anion Transport with Pnictogen Bonds in Direct Comparison with Chalcogen and Halogen Bonds. J Am Chem Soc 2019; 141:810-814. [DOI: 10.1021/jacs.8b12554] [Citation(s) in RCA: 118] [Impact Index Per Article: 23.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Affiliation(s)
- Lucia M. Lee
- School of Chemistry and Biochemistry, NCCR Chemical Biology, University of Geneva, CH-1211 Geneva, Switzerland
| | - Maria Tsemperouli
- School of Chemistry and Biochemistry, NCCR Chemical Biology, University of Geneva, CH-1211 Geneva, Switzerland
| | | | - Sebastian Benz
- School of Chemistry and Biochemistry, NCCR Chemical Biology, University of Geneva, CH-1211 Geneva, Switzerland
| | - Naomi Sakai
- School of Chemistry and Biochemistry, NCCR Chemical Biology, University of Geneva, CH-1211 Geneva, Switzerland
| | - Kaori Sugihara
- School of Chemistry and Biochemistry, NCCR Chemical Biology, University of Geneva, CH-1211 Geneva, Switzerland
| | - Stefan Matile
- School of Chemistry and Biochemistry, NCCR Chemical Biology, University of Geneva, CH-1211 Geneva, Switzerland
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18
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Trubenstein HJ, Moaven S, Vega M, Unruh DK, Cozzolino AF. Pnictogen bonding with alkoxide cages: which pnictogen is best? NEW J CHEM 2019. [DOI: 10.1039/c9nj03648b] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
Antimony cages have the best balance between strength and directionality compared to the other congeners.
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Affiliation(s)
| | - Shiva Moaven
- Department of Chemistry & Biochemistry
- Texas Tech University
- Lubbock
- USA
| | - Maythe Vega
- Department of Chemistry & Biochemistry
- Texas Tech University
- Lubbock
- USA
| | - Daniel K. Unruh
- Department of Chemistry & Biochemistry
- Texas Tech University
- Lubbock
- USA
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