1
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Sakata Y, Nabekura R, Hazama Y, Hanya M, Nishiyama T, Kii I, Hosoya T. Synthesis of Functionalized Dibenzoazacyclooctynes by a Decomplexation Method for Dibenzo-Fused Cyclooctyne-Cobalt Complexes. Org Lett 2023; 25:1051-1055. [PMID: 36511709 DOI: 10.1021/acs.orglett.2c03832] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
A concise route for dibenzoazacyclooctynes (DIBACs) synthesis was developed based on Pictet-Spengler reaction and a novel cobalt decomplexation method established for dibenzo-fused cyclooctyne-cobalt complexes. The method allowed for the facile preparation of functionalized DIBACs, including bisDIBAC, which served as an efficient bisreactive linker for protein modification via the double-click reaction.
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Affiliation(s)
- Yuki Sakata
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan
| | - Ryoto Nabekura
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan
| | - Yuki Hazama
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan
| | - Miho Hanya
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan
| | - Takashi Nishiyama
- Laboratory for Drug Target Research, Department of Agriculture, Graduate School of Science and Technology, Shinshu University, 8304 Minami-Minowa, Kami-Ina, Nagano 399-4598, Japan
| | - Isao Kii
- Laboratory for Drug Target Research, Department of Agriculture, Graduate School of Science and Technology, Shinshu University, 8304 Minami-Minowa, Kami-Ina, Nagano 399-4598, Japan
| | - Takamitsu Hosoya
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan
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2
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Wu D, Durán-Sampedro G, Fitzgerald S, Garre M, O'Shea DF. Double click macrocyclization with Sondheimer diyne of aza-dipyrrins for B-F ree bioorthogonal imaging. Chem Commun (Camb) 2023; 59:1951-1954. [PMID: 36722871 DOI: 10.1039/d2cc06461h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Abstract
Sequential azide/diyne cycloadditions proved highly effective for the macrocyclization of a bis-azido aza-dipyrrin. Macrocyclic aza-dipyrrin could be produced in 30 min at rt in water with changes in fluorescence intensity and lifetimes measurable upon reaction. Live cell microscopy showed that aza-dipyrrins were suitable for confocal and STED super-resolution imaging and a bioorthogonal response to macrocyclization could be detected in cellular compartments. These results will encourage a broader examination of the sensing and imaging uses of aza-dipyrrins.
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Affiliation(s)
- Dan Wu
- Department of Chemistry, RCSI, 123 St Stephen's Green, Dublin 2, Ireland.
| | | | - Sheila Fitzgerald
- Department of Chemistry, RCSI, 123 St Stephen's Green, Dublin 2, Ireland.
| | - Massimiliano Garre
- Department of Chemistry, RCSI, 123 St Stephen's Green, Dublin 2, Ireland.
| | - Donal F O'Shea
- Department of Chemistry, RCSI, 123 St Stephen's Green, Dublin 2, Ireland.
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3
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Sugiyama K, Sakata Y, Niwa T, Yoshida S, Hosoya T. Azido-type-selective triazole formation by iridium-catalyzed cycloaddition with thioalkynes. Chem Commun (Camb) 2022; 58:6235-6238. [PMID: 35510642 DOI: 10.1039/d2cc01739c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The iridium-catalyzed azide-thioalkyne cycloaddition was found to proceed much faster with benzyl azide than with phenyl azide. The high azido-type selectivity was also observed in other combinations of azides with different steric environments. This finding enabled the efficient assembly of three azidophilic molecules to triazido platforms by three sequential triazole-forming reactions.
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Affiliation(s)
- Kazuya Sugiyama
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan.
| | - Yuki Sakata
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan.
| | - Takashi Niwa
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan. .,Laboratory for Chemical Biology, RIKEN Center for Biosystems Dynamics Research, 6-7-3 Minatojima-minamimachi, Chuo-ku, Kobe 650-0047, Japan
| | - Suguru Yoshida
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan.
| | - Takamitsu Hosoya
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan. .,Laboratory for Chemical Biology, RIKEN Center for Biosystems Dynamics Research, 6-7-3 Minatojima-minamimachi, Chuo-ku, Kobe 650-0047, Japan
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4
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Yoshida S, Sakata Y, Misawa Y, Morita T, Kuribara T, Ito H, Koike Y, Kii I, Hosoya T. Assembly of four modules onto a tetraazide platform by consecutive 1,2,3-triazole formations. Chem Commun (Camb) 2021; 57:899-902. [PMID: 33367381 DOI: 10.1039/d0cc07789e] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Abstract
Efficient consecutive 1,2,3-triazole formations using multiazide platforms are disclosed. On the basis of unique clickability of the 1-adamantyl azido group, a four-step synthesis of tetrakis(triazole)s was achieved from a tetraazide platform molecule. This method was applied to a convergent synthesis of tetrafunctionalized probes in a modular synthetic manner.
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Affiliation(s)
- Suguru Yoshida
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan.
| | - Yuki Sakata
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan.
| | - Yoshihiro Misawa
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan.
| | - Takamoto Morita
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan.
| | - Tomoko Kuribara
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan.
| | - Harumi Ito
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan. and Pathophysiological and Health Science Team, Division of Bio-Function Dynamics Imaging, Imaging Platform and Innovation Group, RIKEN Center for Life Science Technologies (CLST), 6-7-3 Minatojima-minamimachi, Chuo-ku, Kobe 650-0047, Japan
| | - Yuka Koike
- Common Facilities Unit, Compass to Healthy Life Research Complex Program, RIKEN Cluster for Science and Technology Hub, 6-7-3 Minatojima-minamimachi, Chuo-ku, Kobe 650-0047, Japan
| | - Isao Kii
- Pathophysiological and Health Science Team, Division of Bio-Function Dynamics Imaging, Imaging Platform and Innovation Group, RIKEN Center for Life Science Technologies (CLST), 6-7-3 Minatojima-minamimachi, Chuo-ku, Kobe 650-0047, Japan and Common Facilities Unit, Compass to Healthy Life Research Complex Program, RIKEN Cluster for Science and Technology Hub, 6-7-3 Minatojima-minamimachi, Chuo-ku, Kobe 650-0047, Japan
| | - Takamitsu Hosoya
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan.
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5
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Deb T, Tu J, Franzini RM. Mechanisms and Substituent Effects of Metal-Free Bioorthogonal Reactions. Chem Rev 2021; 121:6850-6914. [DOI: 10.1021/acs.chemrev.0c01013] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
Affiliation(s)
- Titas Deb
- Department of Medicinal Chemistry, University of Utah, 30 S 2000 E, Salt Lake City, Utah 84112, United States
| | - Julian Tu
- Department of Medicinal Chemistry, University of Utah, 30 S 2000 E, Salt Lake City, Utah 84112, United States
| | - Raphael M. Franzini
- Department of Medicinal Chemistry, University of Utah, 30 S 2000 E, Salt Lake City, Utah 84112, United States
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6
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Maegawa K, Tanimoto H, Onishi S, Tomohiro T, Morimoto T, Kakiuchi K. Taming the reactivity of alkyl azides by intramolecular hydrogen bonding: site-selective conjugation of unhindered diazides. Org Chem Front 2021. [DOI: 10.1039/d1qo01088c] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
The intramolecular hydrogen bonding in the α-azido secondary acetamides (α-AzSAs) enabled site-selective integration onto the diazide modular hubs even without steric hindrance.
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Affiliation(s)
- Koshiro Maegawa
- Division of Materials Science, Nara Institute of Science and Technology (NAIST), 8916-5 Takayamacho, Ikoma, Nara 630-0192, Japan
| | - Hiroki Tanimoto
- Division of Materials Science, Nara Institute of Science and Technology (NAIST), 8916-5 Takayamacho, Ikoma, Nara 630-0192, Japan
- Faculty of Pharmaceutical Sciences, University of Toyama, 2630 Sugitani, Toyama 930-0194, Japan
| | - Seiji Onishi
- Division of Materials Science, Nara Institute of Science and Technology (NAIST), 8916-5 Takayamacho, Ikoma, Nara 630-0192, Japan
| | - Takenori Tomohiro
- Faculty of Pharmaceutical Sciences, University of Toyama, 2630 Sugitani, Toyama 930-0194, Japan
| | - Tsumoru Morimoto
- Division of Materials Science, Nara Institute of Science and Technology (NAIST), 8916-5 Takayamacho, Ikoma, Nara 630-0192, Japan
| | - Kiyomi Kakiuchi
- Division of Materials Science, Nara Institute of Science and Technology (NAIST), 8916-5 Takayamacho, Ikoma, Nara 630-0192, Japan
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7
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Takemura H, Goto S, Hosoya T, Yoshida S. 2-Azidoacrylamides as compact platforms for efficient modular synthesis. Chem Commun (Camb) 2020; 56:15541-15544. [PMID: 33241832 DOI: 10.1039/d0cc07212e] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
Efficient methods to assemble modules with compact platform molecules by triazole formations and Michael reactions are disclosed. The good electrophilicity of 2-triazolylacrylamides realized Michael additions using various nucleophiles. An iterative synthesis of a tetrakis(triazole) was accomplished by orthogonal triazole formations and Michael reactions.
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Affiliation(s)
- Hinano Takemura
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan.
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8
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Terashima N, Sakata Y, Meguro T, Hosoya T, Yoshida S. Triazole formation of phosphinyl alkynes with azides through transient protection of phosphine by copper. Chem Commun (Camb) 2020; 56:14003-14006. [PMID: 33094760 DOI: 10.1039/d0cc06551j] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
An efficient preparation method of functionalized phosphines by copper-catalyzed azide-alkyne cycloaddition (CuAAC) through the transient protection of phosphine from the Staudinger reaction is disclosed. Diverse phosphines were prepared from phosphinyl alkynes and azides by the click reaction at the ethynyl group without damaging the phosphinyl group. Double- and triple-click assemblies of azides were accomplished by triazole formations and robust azaylide formation.
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Affiliation(s)
- Norikazu Terashima
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan.
| | - Yuki Sakata
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan.
| | - Tomohiro Meguro
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan.
| | - Takamitsu Hosoya
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan.
| | - Suguru Yoshida
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan.
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9
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Makio N, Sakata Y, Kuribara T, Adachi K, Hatakeyama Y, Meguro T, Igawa K, Tomooka K, Hosoya T, Yoshida S. (Hexafluoroacetylacetonato)copper(I)-cycloalkyne complexes as protected cycloalkynes. Chem Commun (Camb) 2020; 56:11449-11452. [PMID: 32852507 DOI: 10.1039/d0cc05182a] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Abstract
A protection method for cycloalkynes by the formation of (hexafluoroacetylacetonato)copper(i)-cycloalkyne complexes is disclosed. Various complexes having functional groups were efficiently prepared, which are easily purified by silica-gel column chromatography. Selective click reactions were realized through the complexation of cycloalkynes with copper.
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Affiliation(s)
- Naoaki Makio
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan.
| | - Yuki Sakata
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan.
| | - Tomoko Kuribara
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan.
| | - Keisuke Adachi
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan.
| | - Yasutomo Hatakeyama
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan.
| | - Tomohiro Meguro
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan.
| | - Kazunobu Igawa
- Institute for Materials Chemistry and Engineering, Kyushu University, 6-1 Kasuga-koen, Kasuga, Fukuoka 816-8580, Japan
| | - Katsuhiko Tomooka
- Institute for Materials Chemistry and Engineering, Kyushu University, 6-1 Kasuga-koen, Kasuga, Fukuoka 816-8580, Japan
| | - Takamitsu Hosoya
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan.
| | - Suguru Yoshida
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan.
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10
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Zhang L, Wu Y, Li S, Zhang Y, Zhang K. Scalable Bimolecular Ring-Closure Method for Cyclic Polymers. Macromolecules 2020. [DOI: 10.1021/acs.macromol.0c01511] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Affiliation(s)
- Liangcai Zhang
- Laboratory of Polymer Physics and Chemistry, Beijing National Laboratory for Molecular Sciences, Institute of Chemistry, The Chinese Academy of Sciences, Beijing 100190, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Ying Wu
- Institute of Polymer Chemistry and Physics, College of Chemistry, Beijing Normal University, Beijing 100875, China
| | - Shumu Li
- Laboratory of Polymer Physics and Chemistry, Beijing National Laboratory for Molecular Sciences, Institute of Chemistry, The Chinese Academy of Sciences, Beijing 100190, China
| | - Yuanxing Zhang
- Laboratory of Polymer Physics and Chemistry, Beijing National Laboratory for Molecular Sciences, Institute of Chemistry, The Chinese Academy of Sciences, Beijing 100190, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Ke Zhang
- Laboratory of Polymer Physics and Chemistry, Beijing National Laboratory for Molecular Sciences, Institute of Chemistry, The Chinese Academy of Sciences, Beijing 100190, China
- University of Chinese Academy of Sciences, Beijing 100049, China
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11
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Adachi K, Meguro T, Sakata Y, Igawa K, Tomooka K, Hosoya T, Yoshida S. Selective strain-promoted azide-alkyne cycloadditions through transient protection of bicyclo[6.1.0]nonynes with silver or gold. Chem Commun (Camb) 2020; 56:9823-9826. [PMID: 32716445 DOI: 10.1039/d0cc04606j] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
Complexation of bicyclo[6.1.0]nonynes with a cationic silver or gold salt results in protection from a click reaction with azides. The cycloalkyne protection using the silver or gold salt enables selective strain-promoted azide-alkyne cycloadditions of diynes keeping the bicyclo[6.1.0]nonyne moiety unreacted.
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Affiliation(s)
- Keisuke Adachi
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan.
| | - Tomohiro Meguro
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan.
| | - Yuki Sakata
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan.
| | - Kazunobu Igawa
- Institute for Materials Chemistry and Engineering, Kyushu University, 6-1 Kasuga-koen, Kasuga, Fukuoka 816-8580, Japan
| | - Katsuhiko Tomooka
- Institute for Materials Chemistry and Engineering, Kyushu University, 6-1 Kasuga-koen, Kasuga, Fukuoka 816-8580, Japan
| | - Takamitsu Hosoya
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan.
| | - Suguru Yoshida
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan.
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12
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Yoshida S. Sequential conjugation methods based on triazole formation and related reactions using azides. Org Biomol Chem 2020; 18:1550-1562. [PMID: 32016260 DOI: 10.1039/c9ob02698c] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
The recent remarkable progress in azide chemistry has realized sequential conjugation methods with selective 1,2,3-triazole formation. On the basis of the diverse reactivities of azides and azidophiles, including terminal alkynes and cyclooctynes, various selective reactions to furnish triazoles and a wide range of platform molecules, such as diynes, diazides, triynes, and triazides, have been developed so far for bis- and tris(triazole) syntheses. This review highlights recent transformations involving selective triazole formation, allowing the efficient preparation of unsymmetric bis- and tris(triazole)s using diverse platform molecules.
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Affiliation(s)
- Suguru Yoshida
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan.
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13
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Meguro T, Sakata Y, Morita T, Hosoya T, Yoshida S. Facile assembly of three cycloalkyne-modules onto a platform compound bearing thiophene S,S-dioxide moiety and two azido groups. Chem Commun (Camb) 2020; 56:4720-4723. [DOI: 10.1039/d0cc01810d] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
An efficient method to assemble three cycloalkyne-modules onto a platform bearing a thiophene S,S-dioxide moiety and two azido groups has been developed. The sequential reactions without catalysis or additives enabled the facile preparation of trifunctional molecules by a simple procedure.
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Affiliation(s)
- Tomohiro Meguro
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering
- Tokyo Medical and Dental University (TMDU)
- 2-3-10 Kanda-Surugadai
- Chiyoda-ku
- Tokyo 101-0062
| | - Yuki Sakata
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering
- Tokyo Medical and Dental University (TMDU)
- 2-3-10 Kanda-Surugadai
- Chiyoda-ku
- Tokyo 101-0062
| | - Takamoto Morita
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering
- Tokyo Medical and Dental University (TMDU)
- 2-3-10 Kanda-Surugadai
- Chiyoda-ku
- Tokyo 101-0062
| | - Takamitsu Hosoya
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering
- Tokyo Medical and Dental University (TMDU)
- 2-3-10 Kanda-Surugadai
- Chiyoda-ku
- Tokyo 101-0062
| | - Suguru Yoshida
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering
- Tokyo Medical and Dental University (TMDU)
- 2-3-10 Kanda-Surugadai
- Chiyoda-ku
- Tokyo 101-0062
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14
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Tera M, Luedtke NW. Three-Component Bioorthogonal Reactions on Cellular DNA and RNA. Bioconjug Chem 2019; 30:2991-2997. [DOI: 10.1021/acs.bioconjchem.9b00630] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
Affiliation(s)
- Masayuki Tera
- Department of Chemistry, University of Zurich, Winterthurerstrasse 190, 8057 Zurich, Switzerland
| | - Nathan W. Luedtke
- Department of Chemistry, University of Zurich, Winterthurerstrasse 190, 8057 Zurich, Switzerland
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15
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Yoshida S, Goto S, Nishiyama Y, Hazama Y, Kondo M, Matsushita T, Hosoya T. Effect of Resonance on the Clickability of Alkenyl Azides in the Strain-promoted Cycloaddition with Dibenzo-fused Cyclooctynes. CHEM LETT 2019. [DOI: 10.1246/cl.190400] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Affiliation(s)
- Suguru Yoshida
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan
| | - Sayuri Goto
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan
| | - Yoshitake Nishiyama
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan
| | - Yuki Hazama
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan
| | - Masakazu Kondo
- Ichihara Research Center, JNC Petrochemical Corporation, 5-1 Goikaigan, Ichihara, Chiba 290-8551, Japan
| | - Takeshi Matsushita
- Ichihara Research Center, JNC Petrochemical Corporation, 5-1 Goikaigan, Ichihara, Chiba 290-8551, Japan
| | - Takamitsu Hosoya
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), 2-3-10 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-0062, Japan
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16
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Guselnikova O, Postnikov P, Chehimi MM, Kalachyovaa Y, Svorcik V, Lyutakov O. Surface Plasmon-Polariton: A Novel Way To Initiate Azide-Alkyne Cycloaddition. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2019; 35:2023-2032. [PMID: 30657691 DOI: 10.1021/acs.langmuir.8b03041] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
Plasmon catalysis has recently generated tremendous interest in the field of modern chemistry. Application of plasmon introduces the principally new stimulus for the activation of organic reactions, keeping the optical energy concentrated in the vicinity of plasmonic structure, creating an optical near-field enhancement as well as hot electron injection. In this work, for the first time, we presented a new way for the initiation of the azide-alkyne cycloaddition (AAC) using the surface plasmon-polariton wave, supported by the gold grating. With this concept in hand, the plasmon-active gold grating was functionalized with 4-ethynylbenzenediazonium compound. Then, surface-grafted 4-ethynylphenyl groups were plasmon activated and clicked with 4-azidobenzoic acid. Additional experiments allowed to exclude the potential effect of photon, heating, and metal impurities confirmed the key role of surface plasmon-polariton AAC activation. For the investigation of plasmon-induced AAC mechanism, 4-azidophenyl groups (instead of 4-ethynylphenyl groups) were also grafted to the grating surface. Further careful evaluation of reaction kinetics demonstrates that the AAC reaction rate is significantly higher in the case of acetylene activation than in the case of azide activation.
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Affiliation(s)
- Olga Guselnikova
- Department of Solid State Engineering , University of Chemistry and Technology , 16628 Prague , Czech Republic
- Research School of Chemistry and Applied Biomedical Sciences , Tomsk Polytechnic University , Tomsk 634050 , Russian Federation
| | - Pavel Postnikov
- Department of Solid State Engineering , University of Chemistry and Technology , 16628 Prague , Czech Republic
- Research School of Chemistry and Applied Biomedical Sciences , Tomsk Polytechnic University , Tomsk 634050 , Russian Federation
| | | | - Yevgeniya Kalachyovaa
- Research School of Chemistry and Applied Biomedical Sciences , Tomsk Polytechnic University , Tomsk 634050 , Russian Federation
| | - Vaclav Svorcik
- Research School of Chemistry and Applied Biomedical Sciences , Tomsk Polytechnic University , Tomsk 634050 , Russian Federation
| | - Oleksiy Lyutakov
- Department of Solid State Engineering , University of Chemistry and Technology , 16628 Prague , Czech Republic
- Research School of Chemistry and Applied Biomedical Sciences , Tomsk Polytechnic University , Tomsk 634050 , Russian Federation
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17
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Yoshida S, Kuribara T, Ito H, Meguro T, Nishiyama Y, Karaki F, Hatakeyama Y, Koike Y, Kii I, Hosoya T. A facile preparation of functional cycloalkynes via an azide-to-cycloalkyne switching approach. Chem Commun (Camb) 2019; 55:3556-3559. [DOI: 10.1039/c9cc01113g] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Abstract
Terminal alkyne-selective click conjugation of diynes bearing strained and terminal alkyne moieties with functional azides has been achieved by transient protection of strained alkynes via complexation with copper to easily afford various functional cycloalkynes.
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Affiliation(s)
- Suguru Yoshida
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering
- Tokyo Medical and Dental University (TMDU)
- Tokyo 101-0062
- Japan
| | - Tomoko Kuribara
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering
- Tokyo Medical and Dental University (TMDU)
- Tokyo 101-0062
- Japan
| | - Harumi Ito
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering
- Tokyo Medical and Dental University (TMDU)
- Tokyo 101-0062
- Japan
- Laboratory for Pathophysiological and Health Science
| | - Tomohiro Meguro
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering
- Tokyo Medical and Dental University (TMDU)
- Tokyo 101-0062
- Japan
| | - Yoshitake Nishiyama
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering
- Tokyo Medical and Dental University (TMDU)
- Tokyo 101-0062
- Japan
| | - Fumika Karaki
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering
- Tokyo Medical and Dental University (TMDU)
- Tokyo 101-0062
- Japan
| | - Yasutomo Hatakeyama
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering
- Tokyo Medical and Dental University (TMDU)
- Tokyo 101-0062
- Japan
| | - Yuka Koike
- Common Facilities Unit
- Compass to Healthy Life Research Complex Program
- RIKEN Cluster for Science
- Technology and Innovation Hub
- Kobe 650-0047
| | - Isao Kii
- Laboratory for Pathophysiological and Health Science
- RIKEN Center for Biosystems Dynamics Research (BDR)
- Kobe 650-0047
- Japan
- Common Facilities Unit
| | - Takamitsu Hosoya
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering
- Tokyo Medical and Dental University (TMDU)
- Tokyo 101-0062
- Japan
- Laboratory for Chemical Biology
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18
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Yokoi T, Ueda T, Tanimoto H, Morimoto T, Kakiuchi K. Site-selective conversion of azido groups at carbonyl α-positions into oxime groups leading triazide to a triple click conjugation scaffold. Chem Commun (Camb) 2019; 55:1891-1894. [DOI: 10.1039/c8cc09415b] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
Abstract
This paper reports the selective conversion of alkyl azido groups at the carbonyl α-position into oximes, and one-pot triple click conjugation is demonstrated.
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Affiliation(s)
- Taiki Yokoi
- Division of Materials Science
- Graduate School of Science and Technology
- Nara Institute of Science and Technology (NAIST)
- 8916-5 Takayamacho
- Ikoma
| | - Tomomi Ueda
- Division of Materials Science
- Graduate School of Science and Technology
- Nara Institute of Science and Technology (NAIST)
- 8916-5 Takayamacho
- Ikoma
| | - Hiroki Tanimoto
- Division of Materials Science
- Graduate School of Science and Technology
- Nara Institute of Science and Technology (NAIST)
- 8916-5 Takayamacho
- Ikoma
| | - Tsumoru Morimoto
- Division of Materials Science
- Graduate School of Science and Technology
- Nara Institute of Science and Technology (NAIST)
- 8916-5 Takayamacho
- Ikoma
| | - Kiyomi Kakiuchi
- Division of Materials Science
- Graduate School of Science and Technology
- Nara Institute of Science and Technology (NAIST)
- 8916-5 Takayamacho
- Ikoma
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