Hydrogen- and halogen-bonding-directed trimeric supramolecular motifs in dihalogenated 1,2,4-triazoles

Hydrogen-bonding and halogen-bonding interactions are important noncovalent interactions that play a significant role in the crystal structure of organic molecules. An in-depth analysis is given of the crystal packing of two previously reported crystal structures of dihalogenated 1,2,4-triazole derivatives, namely 3,5-dichloro-1H-1,2,4-triazole and 3,5-dibromo-1H-1,2,4-triazole. This work provides insights into the complex interplay of hydrogen-bonding and halogen-bonding interactions resulting in the formation of multiple trimeric motifs in the crystal structure of 1,2,4-triazole derivatives. Analysis of the crystal packing of these isostructural crystal structures revealed that the molecular arrangement in these molecules is primarily stabilized by the formation of different trimeric motifs stabilized by N-H...N hydrogen bonds, N-H...X (X = Cl/Br) halogen bonds and C-X...X halogen-bonding interactions. Computational studies further revealed that all these trimers are energetically stable. A crystallographic database search further reveals that while the cyclic trimers reported in this study are present in other molecules, structures analyzed in this study are the sole instances where all are present simultaneously.

Catalytic activation via π-backbonding in halogen bonds

The role of halogen bonding (XB) in chemical catalysis has largely involved using XB donors as Lewis acid activators to modulate the reactivity of partner Lewis bases. We explore a more uncommon scenario, where a Lewis base modulates reactivity via a spectator halogen bond interaction. Our computational studies reveal that spectator halogen bonds may play an important role in modulating the rate of SN2 reactions. Most notably, π acceptors such as PF3 significantly decrease the barrier to substitution by decreasing electron density in the very electron rich transition state. Such π-backbonding represents an example of a heretofore unexplored situation in halogen bonding: the combination of both σ-donation and π-backdonation in this "non-covalent" interaction. The broader implications of this observation are discussed.

A new family of one-dimensional bromo-bridged Ir(IV)-Cu(II) complexes based on the hexabromoiridate(IV) metalloligand

By using the iridium(IV) complex (NBu₄)₂[IrBr₆] (1) as a metalloligand towards a Cu(II) metal ion, three novel Ir(IV) one-dimensional (1D) compounds of formula {IrBr₅(μ-Br)Cu(Meim)₄}_n (2), {IrBr₅(μ-Br)Cu(Viim)₄}_n (3) and {IrBr₅(μ-Br)Cu(Buim)₄}_n (4), [Meim = 1-methylimidazole; Viim = 1-vinylimidazole; Buim = 1-butylimidazole] have been prepared and structurally and magnetically characterised. Compounds 2, 3 and 4 crystallise in the triclinic, monoclinic and orthorhombic crystal systems with space groups P1̄, C2/c and Pccn, respectively. Each Ir(IV) ion in 1-4 is six-coordinate and bonded to six bromide ions in a quasi regular octahedral geometry. In compounds 2-4, the Cu^II ion shows an axially elongated octahedron with four N atoms, from four monodentate imidazole derivative ligands, that form the equatorial plane and two bromide ions that occupy the axial positions. Cu(II) and Ir(IV) ions are linked through bridging bromide anions generating Ir(IV)-Cu(II) chains [with intrachain Cu(II)⋯Ir(IV) distances covering the range of ca. 5.10-5.42 Å]. In the crystal lattice of 2 and 3 are observed significant intermolecular Ir-Br⋯Br-Ir contacts and π⋯Br interactions, which organize arrangements that contribute to stabilizing the crystal structure of these Ir(IV)-based compounds. DC magnetic susceptibility measurements reveal that 1 displays magnetic behaviour typical of noninteracting mononuclear centres with S = 1/2. Besides, antiferromagnetic behaviour (2 and 3) and ferromagnetic (4) exchange coupling occur between the Cu(II) and Ir(IV) metal ions in the one-dimensional bromo-bridged compounds 2-4. Moreover, the study of the AC magnetic susceptibility shows a field-induced slow relaxation of the magnetisation for 1, indicating the presence of the single-ion magnet (SIM) phenomenon for the magnetically isolated hexabromoiridate(IV) complex.

Exploring halogen⋯halogen interactions in supramolecular self-assemblies of BODIPY networks

In this study, the efficiency of halogen⋯halogen interactions to control supramolecular assemblies of boron dipyrromethene (BODIPY) (B1–B5) derivatives was explored.

Halogen Interactions in Halogenated Oxindoles: Crystallographic and Computational Investigations of Intermolecular Interactions

X-ray structural determinations and computational studies were used to investigate halogen interactions in two halogenated oxindoles. Comparative analyses of the interaction energy and the interaction properties were carried out for Br···Br, C-H···Br, C-H···O and N-H···O interactions. Employing Møller-Plesset second-order perturbation theory (MP2) and density functional theory (DFT), the basis set superposition error (BSSE) corrected interaction energy (E_int(BSSE)) was determined using a supramolecular approach. The E_int(BSSE) results were compared with interaction energies obtained by Quantum Theory of Atoms in Molecules (QTAIM)-based methods. Reduced Density Gradient (RDG), QTAIM and Natural bond orbital (NBO) calculations provided insight into possible pathways for the intermolecular interactions examined. Comparative analysis employing the electron density at the bond critical points (BCP) and molecular electrostatic potential (MEP) showed that the interaction energies and the relative orientations of the monomers in the dimers may in part be understood in light of charge redistribution in these two compounds.

Modulation of supramolecular self-assembly of BODIPY tectons via halogen bonding

In this study, the efficiency of halogen bonding strategies to control over the supramolecular assemblies of boron dipyrromethene (BODIPY) (B-1, B-2, and B-3) derivatives was explored.

Carbon (sp3) tetrel bonding mediated BODIPY supramolecular assembly via unprecedented synergy of Csp3⋯N and Csp3⋯F pair interactions

Here, we present the first example of sp³ hybridized carbon centered (C_sp3) tetrel bonding mediated 3D BODIPY assembly via the exceptional synergy of C_sp3⋯N and C_sp3⋯F pair interactions.

An integrated urea and halogen bond donor based receptor for superior and selective sensing of phosphates

A new RuII based bis-heteroleptic ditopic receptor, 1[PF6]2 (C44H33F12IN10OP2Ru), having integrated anion binding iodotriazole (halogen bond donor) and urea units (-NH bond donor) is employed for selective sensing of phosphates (e.g., H2PO4- and HP2O73-). 1[PF6]2 showed superiority in phosphate sensing in CH3CN as compared to its hydrogen bond donor analogue, 2[PF6]2 (C44H34F12N10OP2Ru), non-urea halogen bond analogue, 3[PF6]2 (C38H27F12IN8P2Ru) and non-urea hydrogen bond donor analogue, 4[PF6]2 (C38H28F12N8P2Ru) in terms of enhanced binding constant values, longer excited state lifetimes and lower detection limit values. 1H-NMR, Isothermal Titration Calorimetry (ITC) and photophysical studies revealed the implementation of the combined role of both the halogen bond donor iodotriazole unit and the -NH unit of the urea moiety for selective and enhanced binding of phosphates.

Copper(I) iodide ribbons coordinated with thiourea derivatives

Two products of the reactions of CuI with 1-benzoyl-3-(4-bromophenyl)thiourea and with 1-benzoyl-3-(2-iodophenyl)thiourea have been obtained and characterized, namely poly[[[1-benzoyl-3-(4-bromophenyl)thiourea-κS]-μ₃-iodido-copper(I)] acetone hemisolvate], {[CuI(C₁₄H₁₁BrN₂OS)]·0.5C₃H₆O}_n, and poly[μ₄-iodido-μ₃-iodido-[N-(benzo[d]thiazol-2-yl)benzamide-κN]dicopper(I)], [Cu₂I₂(C₁₄H₁₀N₂OS)]_n. Their structures, determined by single-crystal X-ray diffraction analysis, exhibit different stoichiometries and molecular organizations; however, both compounds are polymeric and possess close Cu...Cu contacts. The first product contains a (CuI)_n double chain supported by the thiourea derivative coordinated via the S atom. In the second case, the ligand undergoes dehalogenation and cyclization to form N-(benzo[d]thiazol-2-yl)benzamide that serves as the N-donor ligand which is connected to both sides of a (CuI)_n quadruple chain. In both hybrid inorganic chains, I atoms bridge three or four Cu atoms. The coordination centres adopt more or less distorted tetrahedral geometries. The structures of the (CuI)_n kernels of the ribbons are similar to fragments of the layers in high-pressure phase V copper(I) iodide. Only weak S...O, C-H...O, C-H...I and π-π interactions hold the ribbons together, allowing the formation of crystals.

Halogen⋯halogen interactions in the self-assembly of one-dimensional 2,2′-bipyrimidine-based CuIIReIV systems

Two one-dimensional Cu^IIRe^IV coordination polymers of the general formula {[Re^IVCl₄(μ-bpym)Cu^IIX₂]·solvent}_n [where bpym = 2,2′-bipyrimidine, X = Cl (1) and Br (2), and solvent = H₂O (1) and CHCl₃ (2)] have been prepared and characterised structurally and magnetically.