In vitro Production of Hemin-Based Artificial Metalloenzymes

Developing enzyme alternatives is pivotal to improving and enabling new processes in biotechnology and industry. Artificial metalloenzymes (ArMs) are combinations of protein scaffolds with metal elements, such as metal nanoclusters or metal-containing molecules with specific catalytic properties, which can be customized. Here, we engineered an ArM based on the consensus tetratricopeptide repeat (CTPR) scaffold by introducing a unique histidine residue to coordinate the hemin cofactor. Our results show that this engineered system exhibits robust peroxidase-like catalytic activity driven by the hemin. The expression of the scaffold and subsequent coordination of hemin was achieved by recombinant expression in bulk and through in vitro transcription and translation systems in water-in-oil drops. The ability to synthesize this system in emulsio paves the way to improve its properties by means of droplet microfluidic screenings, facilitating the exploration of the protein combinatorial space to discover improved or novel catalytic activities.

Haem-Mediated Albumin Biosensing: Towards Voltammetric Detection of PFOA

The haem group is a promising redox probe for the design of albumin-based voltammetric sensors. Among the endogenous ligands carried by human serum albumin (hSA), haem is characterised by a reversible redox behaviour and its binding kinetics strongly depend on hSA's conformation, which, in turn, depends on the presence of other ligands. In this work, the potential applicability of haem, especially hemin, as a redox probe was first tested in a proof-of-concept study using perfluorooctanoic acid (PFOA) as model analyte. PFOA is known to bind hSA by occupying Sudlow's I site (FA7) which is spatially related to the haem-binding site (FA1). The latter undergoes a conformational change, which is expected to affect hemin's binding kinetics. To verify this hypothesis, hemin:albumin complexes in the presence/absence of PFOA were first screened by UV-Vis spectroscopy. Once the complex formation was verified, haem was further characterised via electrochemical methods to estimate its electron transfer kinetics. The hemin:albumin:PFOA system was studied in solution, with the aim of describing the multiple equilibria at stake and designing an electrochemical assay for PFOA monitoring. This latter could be integrated with protein-based bioremediation approaches for the treatment of per- and polyfluoroalkyl substances polluted waters. Overall, our preliminary results show how hemin can be applied as a redox probe in albumin-based voltammetric sensing strategies.

Self-Assembled Biohybrid: A Living Material To Bridge the Functions between Electronics and Multilevel Biological Modules/Systems

Exoelectrogens are known to be specialized in reducing various extracellular electron acceptors to form conductive nanomaterials that are integrated with their cell bodies both structurally and functionally. Utilizing this unique capacity, we created a strategy toward the design and fabrication of a biohybrid electronic material by exploiting bioreduced graphene oxide (B-rGO) as the structural and functional linker to facilitate the interaction between the exoelectrogen community and external electronics. The metabolic functions of exoelectrogens encoded in this living hybrid can therefore be effectively translated toward corresponding microbial fuel cell applications. Furthermore, this material can serve as a fundamental building block to be integrated with other microorganisms for constructing various electronic components. Toward a broad impact of this biohybridization strategy, photosynthetic organelles and cells were explored to replace exoelectrogens as the active bioreducing components and as formed materials exhibited 4- and 8-fold improvements in photocurrent intensities as compared with native bioelectrode interfaces. Overall, a biologically driven strategy for the fabrication and assembly of electronic materials is demonstrated, which provides a unique opportunity to precisely probe and modulate desired biofunctions through deterministic electronic inputs/outputs and revolutionize the design and manufacturing of next-generation (bio)electronics.

Biorecognition of hydrogen peroxide using a novel electrochemical platform designed with Glossoscolex paulistus giant hemoglobin

The giant extracellular hemoglobin of the annelid Glossoscolex paulistus (HbGp; 3.6 MDa) is a valuable and underexplored supramolecular hemoprotein system for the biorecognition of reactive oxygen species. In this work, an efficient and simple electrochemical platform was designed for analyzing H₂O₂, using HbGp covalently immobilized on Nafion®-modified glassy carbon electrode, named as HbGp/Nafion/GCE. Voltammetric and spectroscopic studies revealed the importance of prior modification of the electrodic support with the conducting polymer to obtain satisfactory hemoglobin electroactivity, as well as a biocompatible microenvironment for its immobilization. In terms of biological activity, it was observed a greater reactivity of the biomolecule in acidic medium, enabling the detection of the analyte by a quasi-reversible mechanism, whose kinetics was limited by analyte diffusion. In the presence of H₂O₂, the native structure of hemoglobin (oxy-HbGp (Fe²⁺)) oxidizes to ferryl-HbGp (Fe⁴⁺) and this redox reaction can be monitored on HbGp/Nafion/GCE with a detection limit of 8.5 × 10^‒7  mol L^-1. In addition to high sensitivity, the electrochemical biosensor also provided reproducible, consistent, and accurate measurements. The electroanalytical method showed an appropriate performance to quantify different levels of H₂O₂ in milk samples, proving the potential of HbGp/Nafion/GCE for this purpose.

Structure-Redox Response Correlation in a Few Select Heme Systems Using X-ray Absorption Spectroelectrochemistry

Heme based biomolecules control some of the most crucial life processes, such as oxygen and electron transport during respiration and energy metabolism, respectively. The active site of the heme, viz., the metal center, plays a key role and attributes functionality to these biomolecules. During the oxygen binding and debinding processes, it is important to note that the oxidation state of iron in hemoglobin (+II in the native form) does not undergo any change. However, the spin states of the metal center change. We present here a comprehensive study of the redox response of such molecules, based on the electronic structure of the active site. The local electronic structure of heme in a few selective molecular systems is studied in operando via synchrotron X-ray absorption spectroscopy (Fe K-edge) and cyclic voltammetry. Our objective is to identify the electronic structural parameters that can effectively be correlated with the redox reversibility. Evolution in these parameters can be followed to trace the overall changes in redox state of the system. Our data indicate that axial coordination and spin state of the iron center are two such parameters that are intimately connected with the redox response.

Spirulina sp. LEB 18-extracted phycocyanin: Effects on liposomes' physicochemical parameters and correlation with antiradical/antioxidant properties

This study describes the physicochemical properties of soybean asolectin (ASO) liposomes loaded with phycocyanin (Phy) extracted from Spirulina sp. LEB 18. The effects of Phy in the liposomes' properties were investigated by Fourier transform infrared spectroscopy (FTIR), ¹H and ³¹P nuclear magnetic resonance (NMR), zeta (ζ)-potential, dynamic light scattering (DLS) and ultraviolet-visible (UV-vis) techniques. Phy restricted the motion of ASO polar and interface groups and disrupted the package arrangement of the lipid hydrophobic regions, as a likely effect of dipolar and π interactions related to its amino acid residues and pyrrole portions. These interactions were correlated to antiradical/antioxidant Phy responses obtained by 2,2-diphenyl-1-picrylhidrazil (DPPH) assay, thiobarbituric acid reactive substances (TBARS) and ferric reducing antioxidant power (FRAP) methods, and discussed to bring new chemical perspectives about Phy-loaded liposomes-related nutraceutical applications in inflammatory and viral infection processes.

Participation in Negative Capacitance of Diffusion-Controlled Voltammograms of Hemin

Hemin in dimethyl sulfoxide solution has exhibited voltammograms controlled by diffusion at glassy carbon electrodes for slow scan rates, although it is adsorbed slightly. In contrast, voltammograms for high scan rates, v > 1 V s^-1, were governed by some kinds of kinetics judging from the scan rate dependence of peaks. The kinetics is close to that of a ferrocenyl derivative, in which the currents include the capacitive component with negative values. The capacitive one can be identified with the proportionality to the scan rates. The variation of the peak currents with v yielded -200 μF cm^-2. This negative value, being associated with the charge transfer reaction, makes cyclic voltammograms deviated downward from the diffusion-controlled behavior, resembling an irreversible reaction of the Butler-Volmer kinetics. Double layer capacitances are generally formed so that the applied electric field may be relaxed. The reduction of hemin forms a dipole coupled with a cation of the salt. The dipole orients from the electrode to the bulk, whereas the solvent dipoles orients in the opposite direction. Therefore, the capacitance is observed negatively. The capacitance determined by ac impedance took also negative values when the applied dc potential was only in the potential domain for the charge transfer. These complications can be avoided in electrocatalysis by use of such slow voltammetry as scan rates of 0.1 V s^-1 and ac frequency of 0.2 Hz.

Unravelling electron transfer in peptide-cation complexes: a model for mimicking redox centres in proteins

We provide evidence that bound zinc promotes electron transfer in a peptide by changing the electronic properties of the peptide.

Biophysical approaches for the study of metal-protein interactions

Protein-protein interactions play important roles for a variety of cell functions, often involving metal ions; in fact, metal-ion binding mediates and regulates the activity of a wide range of biomolecules. Enlightening all of the specific features of metal-protein and metal-mediated protein-protein interactions can be a very challenging task; a detailed knowledge of the thermodynamic and spectroscopic parameters and the structural changes of the protein is normally required. For this purpose, many experimental techniques are employed, embracing all fields of Analytical and Bioinorganic Chemistry. In addition, the use of peptide models, reproducing the primary sequence of the metal-binding sites, is also proved to be useful. In this paper, a review of the most useful techniques for studying ligand-protein interactions with a special emphasis on metal-protein interactions is provided, with a critical summary of their strengths and limitations.