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Huang KY, Li GY, Liang X, Li K, Li L, Cui G, Liu XY. "On-the-Fly" Nonadiabatic Dynamics Simulation on the Ultrafast Photoisomerization of a Molecular Photoswitch Iminothioindoxyl: An RMS-CASPT2 Investigation. J Phys Chem A 2024; 128:7145-7157. [PMID: 39145596 DOI: 10.1021/acs.jpca.4c03685] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/16/2024]
Abstract
Iminothioindoxyl (ITI) is a new class of photoswitch that exhibits many excellent properties including well-separated absorption bands in the visible region for both conformers, ultrafast Z to E photoisomerization as well as the millisecond reisomerization at room temperature for the E isomer, and switchable ability in both solids and various solvents. However, the underlying ultrafast photoisomerization mechanism at the atomic level remains unclear. In this work, we have employed a combination of high-level RMS-CASPT2-based static electronic structure calculations and nonadiabatic dynamics simulations to investigate the ultrafast photoisomerization dynamics of ITI. Based on the minimum-energy structures, minimum-energy conical intersections, linear interpolation internal coordinate paths, and nonadiabatic dynamics simulations, the overall photoisomerization scenario of ITI upon excitation is established. Upon excitation around 416 nm, the molecule will be excited to the S2 state considering its close energy to the experimentally measured absorption maximum and larger oscillator strength, from which ultrafast decay of S2 to S1 state can take place efficiently with a time constant of 62 fs. However, the photoisomerization is not likely to complete in the S2 state since the dihedral associated with the Z to E isomerization changes little during the relaxation. Upon relaxing to the S1 state, the molecule will decay to the S0 state ultrafast with a time constant of 232 fs. In contrast, the decay of the S1 state is important for the isomerization considering that the dihedral related to the isomerization of the hopping structures is close to 90°. Therefore, the S1/S0 intersection region should be important for the isomerization of ITI. Arriving at the S0 state, the molecule can either go back to the original Z reactant or isomerize to the E products. At the end of the 500 fs simulation time, the E configuration accounts for nearly 37% of the final structures. Moreover, the photoisomerization mechanism is different from the isomerization mechanism in the ground state; i.e., instead of the inversion mechanism in the ground state, the photoisomerization prefers the rotation mechanism. Our results not only agree well with previous experimental studies but also provide some novel insights that could be helpful for future improvements in the performance of the ITI photoswitches.
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Affiliation(s)
- Kai-Yue Huang
- College of Chemistry and Material Science, Sichuan Normal University, Chengdu 610068, China
| | - Gao-Yi Li
- College of Chemistry and Material Science, Sichuan Normal University, Chengdu 610068, China
| | - Xiaoqin Liang
- College of Chemistry and Material Science, Sichuan Normal University, Chengdu 610068, China
| | - Kai Li
- College of Chemistry and Material Science, Sichuan Normal University, Chengdu 610068, China
| | - Laicai Li
- College of Chemistry and Material Science, Sichuan Normal University, Chengdu 610068, China
| | - Ganglong Cui
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education, College of Chemistry, Beijing Normal University, Beijing 100875, China
| | - Xiang-Yang Liu
- College of Chemistry and Material Science, Sichuan Normal University, Chengdu 610068, China
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Burns KH, Quincy TJ, Elles CG. Excited-state resonance Raman spectroscopy probes the sequential two-photon excitation mechanism of a photochromic molecular switch. J Chem Phys 2022; 157:234302. [PMID: 36550048 DOI: 10.1063/5.0126974] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022] Open
Abstract
Some diarylethene molecular switches have a low quantum yield for cycloreversion when excited by a single photon, but react more efficiently following sequential two-photon excitation. The increase in reaction efficiency depends on both the relative time delay and the wavelength of the second photon. This paper examines the wavelength-dependent mechanism for sequential excitation using excited-state resonance Raman spectroscopy to probe the ultrafast (sub-30 fs) dynamics on the upper electronic state following secondary excitation. The approach uses femtosecond stimulated Raman scattering (FSRS) to measure the time-gated, excited-state resonance Raman spectrum in resonance with two different excited-state absorption bands. The relative intensities of the Raman bands reveal the initial dynamics in the higher-lying states, Sn, by providing information on the relative gradients of the potential energy surfaces that are accessed via secondary excitation. The excited-state resonance Raman spectra reveal specific modes that become enhanced depending on the Raman excitation wavelength, 750 or 400 nm. Many of the modes that become enhanced in the 750 nm FSRS spectrum are assigned as vibrational motions localized on the central cyclohexadiene ring. Many of the modes that become enhanced in the 400 nm FSRS spectrum are assigned as motions along the conjugated backbone and peripheral phenyl rings. These observations are consistent with earlier measurements that showed higher efficiency following secondary excitation into the lower excited-state absorption band and illustrate a powerful new way to probe the ultrafast dynamics of higher-lying excited states immediately following sequential two-photon excitation.
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Affiliation(s)
- Kristen H Burns
- Department of Chemistry, University of Kansas, Lawrence, Kansas 66045, USA
| | - Timothy J Quincy
- Department of Chemistry, University of Kansas, Lawrence, Kansas 66045, USA
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Wide-range IR spectra of diarylethene derivatives and their simulation using the density functional theory. Sci Rep 2022; 12:16834. [PMID: 36207351 PMCID: PMC9546887 DOI: 10.1038/s41598-022-20264-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2021] [Accepted: 09/12/2022] [Indexed: 11/30/2022] Open
Abstract
Diarylethenes (DAEs), promising photochromic molecular switches, undergo pericyclic reactions upon ultraviolet or visible light illumination. For this reason, most studies on DAEs employ UV–vis spectroscopies. However, also their infrared (IR) spectra are valuable, in particular, for understanding the vibrational dynamics which accompanies the relevant photoreactions. An accurate assignment of IR bands to molecular modes can be achieved through a comparison between experimental and computed theoretical spectra. Even though more sophisticated computational methods are available, the density functional theory (DFT) is usually employed for this task, because of its modest cost and versatility. Here, we have tested the ability of several DFT functionals to reproduce the wide-range, 400–3200 cm−1, IR spectra of open and closed isomers of four representative DAE molecules. We find that global and range-separated, corrected for anharmonicity by scaling factors, hybrid DFT functionals are able to reproduce the IR spectra of DAEs, however, instead of the popular B3LYP functional we propose the use of the dispersion-corrected PBE0 functional. The paper also proposes a semi-automatic method of band assignment.
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Lietard A, Piani G, Pollet R, Soep B, Mestdagh JM, Poisson L. Excited state dynamics of normal dithienylethene molecules either isolated or deposited on an argon cluster. Phys Chem Chem Phys 2022; 24:10588-10598. [PMID: 35446319 DOI: 10.1039/d1cp05729d] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
Real-time dynamics of the electronically excited open-ring isomer of 1,2-bis(2-methylbenzo[b]thiophen-3-yl)perfluorocyclopentene (BTF6) and 1,2-bis(2,4-dimethyl-5-phenyl-3-thienyl)perfluorocyclopentene (PTF6) molecules was investigated using a set-up that associates a molecular beam, femtosecond lasers and velocity map imaging. The molecules were either free in the gas phase or bound to an argon cluster. DFT and TDDFT calculations were performed on BTF6. The calculated vertical excitation energies indicate an excitation by the pump laser towards a superposition of S5 and S6 states. The free molecule dynamics was found to follow a three wavepacket model. One describes the parallel conformer (P) of these molecules. It is unreactive with respect to the ring closure reaction which is responsible for the photochromic property of these molecules. It has no observable decay at the experiment time scale (up to 350 ps). The other two wavepackets describe the reactive antiparallel conformer (AP). They are formed by an early splitting of the wavepacket that was launched initially by the pump laser. They can be considered as generated by excitation of different, essentially uncoupled, deformation modes. They subsequently evolve along independent pathways. One is directed ballistically towards a conical intersection (CI) and decays through the CI to a potential energy surface where it can no longer be detected. The other fraction of the wavepacket decays also towards undetected states but in this case the driving mechanism is a non-adiabatic electronic relaxation within a potential well of the energy surfaces where it was launched. When BTF6 and PTF6 molecules are bound to an argon cluster, the same three wavepacket model applies. The vibronic relaxation timespan is enhanced by a factor 5 and a larger fraction of AP conformers follows this pathway. In contrast, the time constant associated with the ballistic movement is enhanced by only a factor of 2.
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Affiliation(s)
- Aude Lietard
- Université Paris-Saclay, CEA, CNRS, LIDYL, 91191, Gif-sur-Yvette, France.
| | - Giovanni Piani
- Université Paris-Saclay, CEA, CNRS, LIDYL, 91191, Gif-sur-Yvette, France.
| | - Rodolphe Pollet
- Université Paris-Saclay, CEA, CNRS, NIMBE, 91191, Gif-sur-Yvette, France
| | - Benoît Soep
- Université Paris-Saclay, CEA, CNRS, LIDYL, 91191, Gif-sur-Yvette, France. .,Université Paris-Saclay, CNRS, Institut des Sciences Moléculaires d'Orsay, 91405, Orsay, France
| | | | - Lionel Poisson
- Université Paris-Saclay, CEA, CNRS, LIDYL, 91191, Gif-sur-Yvette, France. .,Université Paris-Saclay, CNRS, Institut des Sciences Moléculaires d'Orsay, 91405, Orsay, France
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Amirjalayer S. Understanding the Molecular Origin of the Collective Movement in a Diarylethene-based Photo-Responsive Actuator. Chemphyschem 2021; 22:1658-1661. [PMID: 34213042 PMCID: PMC8456835 DOI: 10.1002/cphc.202100446] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2021] [Revised: 06/29/2021] [Indexed: 11/30/2022]
Abstract
Remotely controlling macroscopic movement is one of the key elements to realize intelligent materials for applications ranging from sensing to robotics. Over the last few years, a number of photomechanical materials based on diarylethene derivatives have been developed. However, a detailed picture of the structural evolution within these soft actuators is often missing. In this work, an atomistic investigation uncovers how the photo-induced molecular dynamics propagates to large-scale motion and results in macroscopic deformation of the crystal. By correlating the intramolecular rearrangement within the photo-responsive switching unit with the intermolecular packing, the molecular mechanism for the photomechanical phenomena is deciphered, which is fundamental for a rational development of photo-responsive actuators.
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Affiliation(s)
- Saeed Amirjalayer
- Westfälische Wilhelms-Universität MünsterPhysikalisches InstituteCenter for Nanotechnology (CeNTech) and Center for Multiscale Theory and Computation (CMTC)Heisenbergstr. 1148149MünsterGermany
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Jankowska J, Martyka M, Michalski M. Photo-cycloreversion mechanism in diarylethenes revisited: A multireference quantum-chemical study at the ODM2/MRCI level. J Chem Phys 2021; 154:204305. [PMID: 34241185 DOI: 10.1063/5.0045830] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Photoswitchable diarylethenes (DAEs), over years of intense fundamental and applied research, have been established among the most commonly chosen molecular photoswitches, often employed as controlling units in molecular devices and smart materials. At the same time, providing reliable explanation for their photophysical behavior, especially the mechanism of the photo-cycloreversion transformation, turned out to be a highly challenging task. Herein, we investigate this mechanism in detail by means of multireference semi-empirical quantum chemistry calculations, allowing, for the first time, for a balanced treatment of the static and dynamic correlation effects, both playing a crucial role in DAE photochemistry. In the course of our study, we find the second singlet excited state of double electronic-excitation character to be the key to understanding the nature of the photo-cycloreversion transformation in DAE molecular photoswitches.
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Affiliation(s)
- J Jankowska
- Faculty of Chemistry, University of Warsaw, Warsaw 02-093, Poland
| | - M Martyka
- Faculty of Chemistry, University of Warsaw, Warsaw 02-093, Poland
| | - M Michalski
- Faculty of Chemistry, University of Warsaw, Warsaw 02-093, Poland
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KOBAYASHI T. Advanced time-resolved absorption spectroscopy with an ultrashort visible/near IR laser and a multi-channel lock-in detector. PROCEEDINGS OF THE JAPAN ACADEMY. SERIES B, PHYSICAL AND BIOLOGICAL SCIENCES 2021; 97:236-260. [PMID: 33980754 PMCID: PMC8141836 DOI: 10.2183/pjab.97.014] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/11/2020] [Accepted: 02/17/2021] [Indexed: 06/12/2023]
Abstract
Ultrashort visible-near infrared (NIR) pulse generation and its applications to ultrafast spectroscopy are discussed. Femtosecond pulses of around 800 nm from a Ti:sapphire laser are used as a pump of an optical parametric amplifier (OPA) in a non-collinear configuration to generate ultrashort visible (500-780 nm) pulses and deep-ultraviolet (DUV, 259-282 nm) pulses. The visible-NIR pulses and DUV pulses were compressed to 3.9 fs and 10.4 fs, respectively, and used to elucidate various ultrafast dynamics in condensed matter with a sub-10 fs resolution by pump-probe measurements. We have also developed a 128-channel lock-in amplifier. The combined system of the world-shortest visible pulse from the OPA and the lock-in amplifier with the world-largest channel-number can clarify the sub-10 fs-dynamics in condensed matter. This system clarified structural changes in an excited state, reaction intermediate, and a transition state. This is possible even during molecular vibration and reactions via a real-time-resolved vibronic spectrum, which provides molecular structural change information. Also, ultrafast dynamics in exotic materials like carbon nanotubes, topological insulators, and novel solar battery systems have been clarified. Furthermore, the carrier-envelope phase in the ultrashort pulse has been controlled and measured.
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Affiliation(s)
- Takayoshi KOBAYASHI
- Center for Neuroscience and Biomedical Engineering, The University of Electro-Communications, Chofu, Tokyo, Japan
- Department of Electrophysics, National Chiao Tung University, Hsinchu, Taiwan
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Sotome H, Okajima H, Nagasaka T, Tachii Y, Sakamoto A, Kobatake S, Irie M, Miyasaka H. Geometrical Evolution and Formation of the Photoproduct in the Cycloreversion Reaction of a Diarylethene Derivative Probed by Vibrational Spectroscopy. Chemphyschem 2020; 21:1524-1530. [PMID: 32489017 DOI: 10.1002/cphc.202000315] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/17/2020] [Revised: 05/19/2020] [Indexed: 02/04/2023]
Abstract
The geometrical evolution of the reactant and formation of the photoproduct in the cycloreversion reaction of a diarylethene derivative were probed using time-resolved absorption spectroscopies in the visible to near-infrared and mid-infrared regions. The time-domain vibrational data in the visible region show that the initially formed Franck-Condon state is geometrically relaxed into the minimum in the excited state potential energy surface, concomitantly with the low-frequency coherent vibrations. Theoretical calculations indicate that the nuclear displacement in this coherent vibration is nearly parallel to that in the geometrical relaxation. Time-resolved mid-infrared spectroscopy directly detected the formation of the open-ring isomer with the same time constant as the decrease of the closed-ring isomer in the excited state minimum. This observation reveals that no detectable intermediate, in which the population is accumulated, is present between the excited closed-ring isomer and the open-ring isomer in the ground state.
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Affiliation(s)
- Hikaru Sotome
- Division of Frontier Materials Science and, Center for Advanced Interdisciplinary Research, Graduate School of Engineering Science, Osaka University, Toyonaka, Osaka, Japan
| | - Hajime Okajima
- Department of Chemistry and Biological Science, College of Science and Engineering, Aoyama Gakuin University, Sagamihara, Kanagawa, Japan
| | - Tatsuhiro Nagasaka
- Division of Frontier Materials Science and, Center for Advanced Interdisciplinary Research, Graduate School of Engineering Science, Osaka University, Toyonaka, Osaka, Japan
| | - Yuka Tachii
- Division of Frontier Materials Science and, Center for Advanced Interdisciplinary Research, Graduate School of Engineering Science, Osaka University, Toyonaka, Osaka, Japan
| | - Akira Sakamoto
- Department of Chemistry and Biological Science, College of Science and Engineering, Aoyama Gakuin University, Sagamihara, Kanagawa, Japan
| | - Seiya Kobatake
- Department of Applied Chemistry Graduate School of Engineering, Osaka City University, Sumiyoshi, Osaka, Japan
| | - Masahiro Irie
- Department of Chemistry and, Research Center for Smart Molecules, Rikkyo University, Toshima-ku, Tokyo, Japan
| | - Hiroshi Miyasaka
- Division of Frontier Materials Science and, Center for Advanced Interdisciplinary Research, Graduate School of Engineering Science, Osaka University, Toyonaka, Osaka, Japan
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Jarota A, Pastorczak E, Abramczyk H. A deeper look into the photocycloreversion of a yellow diarylethene photoswitch: why is it so fast? Phys Chem Chem Phys 2020; 22:5408-5412. [DOI: 10.1039/c9cp05452a] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Abstract
The DMT photoswitch features an efficient ring-opening reaction at a sub-picosecond timescale owing to a single-channel relaxation from the S1 state which leads to a conical intersection with the ground state.
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Affiliation(s)
- Arkadiusz Jarota
- Institute of Applied Radiation Chemistry
- Lodz University of Technology
- 93-590 Łódź
- Poland
| | - Ewa Pastorczak
- Institute of Physics
- Lodz University of Technology
- Łódź
- Poland
| | - Halina Abramczyk
- Institute of Applied Radiation Chemistry
- Lodz University of Technology
- 93-590 Łódź
- Poland
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Abramczyk H, Brozek-Pluska B, Jarota A, Surmacki J, Imiela A, Kopec M. A look into the use of Raman spectroscopy for brain and breast cancer diagnostics: linear and non-linear optics in cancer research as a gateway to tumor cell identity. Expert Rev Mol Diagn 2020; 20:99-115. [PMID: 32013616 DOI: 10.1080/14737159.2020.1724092] [Citation(s) in RCA: 23] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2019] [Accepted: 01/28/2020] [Indexed: 12/14/2022]
Abstract
Introduction: Currently, intensely developing of linear and non-linear optical methods for cancer detection provides a valuable tool to improve sensitivity and specificity. One of the main reasons for insufficient progress in cancer diagnostics is related to the fact that most cancer types are not only heterogeneous in their genetic composition but also reside in varying microenvironments and interact with different cell types. Until now, no technology has been fully proven for effective detecting of invasive cancer, which infiltrating the extracellular matrix.Areas covered: This review investigates the current status of Raman spectroscopy and Raman imaging for brain and breast cancer diagnostics. Moreover, the review provides a comprehensive overview of the applicability of atomic force microscopy (AFM), linear and non-linear optics in cancer research as a gateway to tumor cell identity.Expert commentary: A combination of linear and non-linear optics, particularly Raman-driven methods, has many additional advantages to identify alterations in cancer cells that are crucial for their proliferation and that distinguish them from normal cells.
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Affiliation(s)
- Halina Abramczyk
- Laboratory of Laser Molecular Spectroscopy, Lodz University of Technology, Lodz, Poland
| | - Beata Brozek-Pluska
- Laboratory of Laser Molecular Spectroscopy, Lodz University of Technology, Lodz, Poland
| | - Arkadiusz Jarota
- Laboratory of Laser Molecular Spectroscopy, Lodz University of Technology, Lodz, Poland
| | - Jakub Surmacki
- Laboratory of Laser Molecular Spectroscopy, Lodz University of Technology, Lodz, Poland
| | - Anna Imiela
- Laboratory of Laser Molecular Spectroscopy, Lodz University of Technology, Lodz, Poland
| | - Monika Kopec
- Laboratory of Laser Molecular Spectroscopy, Lodz University of Technology, Lodz, Poland
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Schweigert C, Babii O, Afonin S, Schober T, Leier J, Michenfelder NC, Komarov IV, Ulrich AS, Unterreiner AN. Real‐Time Observation of Diarylethene‐Based Photoswitches in a Cyclic Peptide Environment. CHEMPHOTOCHEM 2019. [DOI: 10.1002/cptc.201900005] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Affiliation(s)
- Caroline Schweigert
- Institute of Physical ChemistryKarlsruhe Institute of Technology (KIT) Fritz-Haber-Weg 2 76131 Karlsruhe (Germany
| | - Oleg Babii
- Institute of Biological Interfaces (IBG-2)Karlsruhe Institute of Technology (KIT) POB 3640 76021 Karlsruhe Germany
| | - Sergii Afonin
- Institute of Biological Interfaces (IBG-2)Karlsruhe Institute of Technology (KIT) POB 3640 76021 Karlsruhe Germany
| | - Tim Schober
- Institute of Organic ChemistryKarlsruhe Institute of Technology (KIT) Fritz-Haber-Weg 6 76131 Karlsruhe Germany
| | - Julia Leier
- Institute of Physical ChemistryKarlsruhe Institute of Technology (KIT) Fritz-Haber-Weg 2 76131 Karlsruhe (Germany
| | - Nadine C. Michenfelder
- Institute of Physical ChemistryKarlsruhe Institute of Technology (KIT) Fritz-Haber-Weg 2 76131 Karlsruhe (Germany
| | - Igor V. Komarov
- Taras Shevchenko National University of Kyiv vul. Volodymyrska 60 01601 Kyiv Ukraine
- Lumobiotics GmbH Auer Str. 2 76227 Karlsruhe Germany
| | - Anne S. Ulrich
- Institute of Biological Interfaces (IBG-2)Karlsruhe Institute of Technology (KIT) POB 3640 76021 Karlsruhe Germany
- Institute of Organic ChemistryKarlsruhe Institute of Technology (KIT) Fritz-Haber-Weg 6 76131 Karlsruhe Germany
| | - Andreas Neil Unterreiner
- Institute of Physical ChemistryKarlsruhe Institute of Technology (KIT) Fritz-Haber-Weg 2 76131 Karlsruhe (Germany
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