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Biswas S, Umesh, Das B, Koley P, Acharya S, Bhattacharya S. Molecular Propeller Tethering on a Dipeptide Induces a One-Step Conversion of Its Secondary Structure on Water Surface Promoted by Chiral Supramolecular Assembly. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2025; 21:e2408634. [PMID: 39610158 DOI: 10.1002/smll.202408634] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/21/2024] [Indexed: 11/30/2024]
Abstract
Water provides a unique surface for the formation of directed self-assembly and transformation of secondary structures of peptides and proteins as witnessed in the biological systems. Herein a one-step transformation of an amyloid-derived dipeptide is reported from β-sheet to α-helix structures on the water surface, facilitated by chiral supramolecular assembly. The study utilizes various analytical techniques to elucidate the structural transformation and the supramolecular packing of the peptide assemblies. Organizations such as spherical aggregates and molecular nanowires containing β-sheet structure are converted into (2D) molecular sheets comprising a larger planar area yet with a molecular level thickness of α-helix structure. The conformational features of the β-sheet to α-helix structural transformation are dominated by the intermolecular H-bonding, π-π stacking, and C─H···π interactions. Strikingly, the dynamic changes in the dihedral (intramolecular) angle between the aromatic rings of the dipeptide at the water surface alter the molecular packing and shorten the intermolecular H-bonds with larger binding energies required for the secondary structural transformation. Thus, the novel one-step strategy reports herein offers a simple, efficient, and hitherto unprecedented way of chiral supramolecular assembly directed total secondary structural transformation of the dipeptide on water surface.
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Affiliation(s)
- Sandip Biswas
- School of Applied & Interdisciplinary Sciences (SAIS), Indian Association for the Cultivation of Science, Kolkata, 700032, India
| | - Umesh
- School of Applied & Interdisciplinary Sciences (SAIS), Indian Association for the Cultivation of Science, Kolkata, 700032, India
| | - Bidisa Das
- School of Applied & Interdisciplinary Sciences (SAIS), Indian Association for the Cultivation of Science, Kolkata, 700032, India
- Research Institute of Sustainable Energy (RISE), TCG-CREST, Sector V, Salt Lake, Kolkata, 700091, India
| | - Pradyot Koley
- School of Applied & Interdisciplinary Sciences (SAIS), Indian Association for the Cultivation of Science, Kolkata, 700032, India
| | - Somobrata Acharya
- School of Applied & Interdisciplinary Sciences (SAIS), Indian Association for the Cultivation of Science, Kolkata, 700032, India
| | - Santanu Bhattacharya
- School of Applied & Interdisciplinary Sciences (SAIS), Indian Association for the Cultivation of Science, Kolkata, 700032, India
- Department of Organic Chemistry, Indian Institute of Science, Bengaluru, 560012, India
- Department of Chemistry, Indian Institute of Science Education and Research, Tirupati, 517619, India
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Lago-Silva M, Fernández-Míguez M, Rodríguez R, Quiñoá E, Freire F. Stimuli-responsive synthetic helical polymers. Chem Soc Rev 2024; 53:793-852. [PMID: 38105704 DOI: 10.1039/d3cs00952a] [Citation(s) in RCA: 24] [Impact Index Per Article: 24.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2023]
Abstract
Synthetic dynamic helical polymers (supramolecular and covalent) and foldamers share the helix as a structural motif. Although the materials are different, these systems also share many structural properties, such as helix induction or conformational communication mechanisms. The introduction of stimuli responsive building blocks or monomer repeating units in these materials triggers conformational or structural changes, due to the presence/absence of the external stimulus, which are transmitted to the helix resulting in different effects, such as assymetry amplification, helix inversion or even changes in the helical scaffold (elongation, J/H helical aggregates). In this review, we show through selected examples how different stimuli (e.g., temperature, solvents, cations, anions, redox, chiral additives, pH or light) can alter the helical structures of dynamic helical polymers (covalent and supramolecular) and foldamers acting on the conformational composition or molecular structure of their components, which is also transmitted to the macromolecular helical structure.
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Affiliation(s)
- María Lago-Silva
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CiQUS) and Departamento de Química Orgánica, Universidade de Santiago de Compostela, E-15782 Santiago de Compostela, Spain.
| | - Manuel Fernández-Míguez
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CiQUS) and Departamento de Química Orgánica, Universidade de Santiago de Compostela, E-15782 Santiago de Compostela, Spain.
| | - Rafael Rodríguez
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CiQUS) and Departamento de Química Orgánica, Universidade de Santiago de Compostela, E-15782 Santiago de Compostela, Spain.
| | - Emilio Quiñoá
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CiQUS) and Departamento de Química Orgánica, Universidade de Santiago de Compostela, E-15782 Santiago de Compostela, Spain.
| | - Félix Freire
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CiQUS) and Departamento de Química Orgánica, Universidade de Santiago de Compostela, E-15782 Santiago de Compostela, Spain.
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Umesh, Bera S, Bhattacharya S. Dual Circularly Polarized Luminescence (CPL) and Piezoelectric Responses in Self-Assembled Chiral Nanostructures Derived from a Dipeptide Based Piezorganogel. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2023:e2308104. [PMID: 37955918 DOI: 10.1002/smll.202308104] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/15/2023] [Revised: 10/17/2023] [Indexed: 11/14/2023]
Abstract
Next-generation medical and consumer electrical devices require soft, flexible materials. Piezoelectric materials, capable of converting mechanical stress into electrical energy, are of interest across various fields. Chiral nanostructures, with inherent chirality, have emerged as potential piezoelectric materials. Peptide-based materials, known for self-assembly and stimuli responsiveness, hold promise for the utilization of chiral nanostructures. When combined with luminescent chromophores, peptides can generate aggregation-induced chiroptical effects like Circularly Polarized Luminescence (CPL) and Circular Dichroism (CD). In this study, a chiral organogel, L,L-1 is synthesized, and its self-assembly, mechanical properties, and chiroptical features are examined. The organogel exhibits thermo-reversible and thixotropic behavior, forming fibrillar networks and 2D-sheets upon cooling. CD spectroscopy reveals aggregation-induced chirality on pyrene chromophore, resulting in CPL with glum values of 3.0 (± 0.2) × 10-3 and 3.1 (± 0.2) × 10-3 for L,L-1 and D,D-1, respectively. Notably, the 2D-sheets exhibit an enhanced piezoelectric response (d33 ≈76.0 pm V-1 ) compared to the fibrillar network (d33 ≈64.1 pm V-1 ). Introducing an electron-deficient molecule into the solution forms a Charge-transfer (CT) complex, modulating the piezoelectric response to d33 ≈52.44 pm V-1 . This study offers a promising approach to optoelectronics design, presenting a chiral system with both CPL and piezoelectric responses, opening new possibilities for innovative applications.
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Affiliation(s)
- Umesh
- School of Applied and Interdisciplinary Sciences, Indian Association for the Cultivation of Science, Kolkata, 700032, India
| | - Sayan Bera
- School of Applied and Interdisciplinary Sciences, Indian Association for the Cultivation of Science, Kolkata, 700032, India
| | - Santanu Bhattacharya
- School of Applied and Interdisciplinary Sciences, Indian Association for the Cultivation of Science, Kolkata, 700032, India
- Department of Organic Chemistry, Indian Institute of Science, Bangalore, 560012, India
- Technical Research Centre, Indian Association for the Cultivation of Science, Kolkata, 700032, India
- Department of Chemistry, Indian Institute of Science Education and Research, Tirupati, 517619, India
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Bassan GA, Marchesan S. Peptide-Based Materials That Exploit Metal Coordination. Int J Mol Sci 2022; 24:ijms24010456. [PMID: 36613898 PMCID: PMC9820281 DOI: 10.3390/ijms24010456] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2022] [Revised: 12/12/2022] [Accepted: 12/22/2022] [Indexed: 12/29/2022] Open
Abstract
Metal-ion coordination has been widely exploited to control the supramolecular behavior of a variety of building blocks into functional materials. In particular, peptides offer great chemical diversity for metal-binding modes, combined with inherent biocompatibility and biodegradability that make them attractive especially for medicine, sensing, and environmental remediation. The focus of this review is the last 5 years' progress in this exciting field to conclude with an overview of the future directions that this research area is currently undertaking.
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Probing the supramolecular assembly in solid, solution and gel phase in uriede based thiazole derivatives and its potential application as iodide ion sensor. J Mol Liq 2022. [DOI: 10.1016/j.molliq.2022.119763] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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V D, P J S, Rajeev N, S AL, Chandran A, G B G, Sadanandan S. Recent Advances in Peptides-Based Stimuli-Responsive Materials for Biomedical and Therapeutic Applications: A Review. Mol Pharm 2022; 19:1999-2021. [PMID: 35730605 DOI: 10.1021/acs.molpharmaceut.1c00983] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
Smart materials are engineered materials that have one or more properties that are introduced in a controlled fashion by surrounding stimuli. Engineering of biomacromolecules like proteins into a smart material call for meticulous artistry. Peptides have grabbed notable attention as a preferred source for smart materials in the medicinal field, promoted by their versatile chemical and biophysical attributes of biocompatibility, and biodegradability. Recent advances in the synthesis of multifunctional peptides have proliferated their application in diverse domains: agriculture, nanotechnology, medicines, biosensors, therapeutics, and soft robotics. Stimuli such as pH, temperature, light, metal ions, and enzymes have vitalized physicochemical properties of peptides by augmented sensitivity, stability, and selectivity. This review elucidates recent (2018-2021) advances in the design and synthesis of smart materials, from stimuli-responsive peptides followed by their biomedical and therapeutic applications.
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Affiliation(s)
- Devika V
- Department of Chemistry, Amrita Vishwa Vidyapeetham, Amritapuri 690525, India
| | - Sreelekshmi P J
- Department of Chemistry, Amrita Vishwa Vidyapeetham, Amritapuri 690525, India
| | - Niranjana Rajeev
- Department of Chemistry, Amrita Vishwa Vidyapeetham, Amritapuri 690525, India
| | - Aiswarya Lakshmi S
- Department of Chemistry, Amrita Vishwa Vidyapeetham, Amritapuri 690525, India
| | - Amrutha Chandran
- Department of Chemistry, Amrita Vishwa Vidyapeetham, Amritapuri 690525, India
| | - Gouthami G B
- Department of Chemistry, Amrita Vishwa Vidyapeetham, Amritapuri 690525, India
| | - Sandhya Sadanandan
- Department of Chemistry, Amrita Vishwa Vidyapeetham, Amritapuri 690525, India
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Biswakarma D, Dey N, Bhattacharya S. A biocompatible hydrogel as a template for oxidative decomposition reactions: a chemodosimetric analysis and in vitro imaging of hypochlorite. Chem Sci 2022; 13:2286-2295. [PMID: 35310481 PMCID: PMC8864679 DOI: 10.1039/d1sc05424d] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/02/2021] [Accepted: 01/06/2022] [Indexed: 11/21/2022] Open
Abstract
The self-assembly properties of new biocompatible, thermoreversible fluorescent hydrogels, composed of amino acid residues have been reported. A unique gel-to-sol transition is triggered by chemodosimetric interaction in the presence of hypochlorite.
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Affiliation(s)
- Dipen Biswakarma
- Department of Organic Chemistry, Indian Institute of Science, Bangalore, Karnataka 560012, India
- Jawaharlal Nehru Centre for Advanced Scientific Research, Jakkur, Bengaluru 560064, Karnataka, India
| | - Nilanjan Dey
- Department of Chemistry, BITS Pilani, Hyderabad Campus, Jawahar Nagar, Shameerpet Mandal, Hyderabad-500078, India
| | - Santanu Bhattacharya
- Department of Organic Chemistry, Indian Institute of Science, Bangalore, Karnataka 560012, India
- School of Applied & Interdisciplinary Sciences, Indian Association for the Cultivation of Science, Kolkata 700032, India
- Jawaharlal Nehru Centre for Advanced Scientific Research, Jakkur, Bengaluru 560064, Karnataka, India
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Das AK, Gavel PK. Low molecular weight self-assembling peptide-based materials for cell culture, antimicrobial, anti-inflammatory, wound healing, anticancer, drug delivery, bioimaging and 3D bioprinting applications. SOFT MATTER 2020; 16:10065-10095. [PMID: 33073836 DOI: 10.1039/d0sm01136c] [Citation(s) in RCA: 53] [Impact Index Per Article: 10.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
In this review, we have focused on the design and development of low molecular weight self-assembling peptide-based materials for various applications including cell proliferation, tissue engineering, antibacterial, antifungal, anti-inflammatory, anticancer, wound healing, drug delivery, bioimaging and 3D bioprinting. The first part of the review describes about stimuli and various noncovalent interactions, which are the key components of various self-assembly processes for the construction of organized structures. Subsequently, the chemical functionalization of the peptides has been discussed, which is required for the designing of self-assembling peptide-based soft materials. Various low molecular weight self-assembling peptides have been discussed to explain the important structural features for the construction of defined functional nanostructures. Finally, we have discussed various examples of low molecular weight self-assembling peptide-based materials for cell culture, antimicrobial, anti-inflammatory, anticancer, wound healing, drug delivery, bioimaging and 3D bioprinting applications.
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Affiliation(s)
- Apurba K Das
- Department of Chemistry, Indian Institute of Technology Indore, Indore 453552, India.
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Mahendar C, Kumar Y, Dixit MK, Dubey M. An Li +-enriched Co 2+-induced metallogel: a study on thixotropic rheological behaviour and conductance. SOFT MATTER 2020; 16:3436-3442. [PMID: 32196044 DOI: 10.1039/c9sm02544h] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
An alkali base and counterion-selective red metallogel (1% w/v) has been synthesized by mixing the adipic acid-derived ligand H2AL with LiOH, followed by the addition of 1 equivalent of Co(OAc)2 in DMF. The addition of Co(OAc)2 not only resulted in the formation of a 2 : 2 (M : L) complex, but also led to the consecutive steps of aggregation, fiber creation, entrapment of the solvent and eventually gelation. The metallogel formation and the mechanism behind gelation have been well characterized and established using various instrumental techniques such as FTIR spectroscopy, UV-vis spectroscopy, FE-SEM, TEM, PXRD, ESI-mass spectrometry, Job's plot and rheology analysis. Nyquist plots suggested a large decrease in the resistance value from 11.3 kΩ to 4.2 kΩ for the solution obtained from the ligand deprotonated by LiOH (AL2-) and Co(OAc)2 containing the metallogel. The Nyquist plot and resistance of the metallogel have also been studied under the influence of temperature and ultrasound stimuli. The extensive rheological measurements provide information about the strength of the gel network and the highly reversible nature and thixotropic behaviour of the metallogel.
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Affiliation(s)
- Chinthakuntla Mahendar
- Soft Materials Research Laboratory, Discipline of Metallurgy Engineering and Materials Science, Indian Institute of Technology Indore, Simrol, Indore 453552, India.
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Mondal S, Das S, Nandi AK. A review on recent advances in polymer and peptide hydrogels. SOFT MATTER 2020; 16:1404-1454. [PMID: 31984400 DOI: 10.1039/c9sm02127b] [Citation(s) in RCA: 216] [Impact Index Per Article: 43.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
In this review, we focus on the very recent developments on the use of the stimuli responsive properties of polymer hydrogels for targeted drug delivery, tissue engineering, and biosensing utilizing their different optoelectronic properties. Besides, the stimuli-responsive hydrogels, the conducting polymer hydrogels are discussed, with specific attention to the energy generation and storage behavior of the xerogel derived from the hydrogel. The electronic and ionic conducting gels have been discussed that have applications in various electronic devices, e.g., organic field effect transistors, soft robotics, ionic skins, and sensors. The properties of polymer hybrid gels containing carbon nanomaterials have been exemplified here giving attention to applications in supercapacitors, dye sensitized solar cells, photocurrent switching, etc. Recent trends in the properties and applications of some natural polymer gels to produce thermal and acoustic insulating materials, drug delivery vehicles, self-healing material, tissue engineering, etc., are discussed. Besides the polymer gels, peptide gels of different dipeptides, tripeptides, oligopeptides, polypeptides, cyclic peptides, etc., are discussed, giving attention mainly to biosensing, bioimaging, and drug delivery applications. The properties of peptide-based hybrid hydrogels with polymers, nanoparticles, nucleotides, fullerene, etc., are discussed, giving specific attention to drug delivery, cell culture, bio-sensing, and bioimaging properties. Thus, the present review delineates, in short, the preparation, properties, and applications of different polymer and peptide hydrogels prepared in the past few years.
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Affiliation(s)
- Sanjoy Mondal
- Polymer Science Unit, School of Materials Sciences, Indian Association for the Cultivation of Science, Jadavpur, Kolkata 700032, India.
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Kar T, Patra N. Pyrene‐based fluorescent supramolecular hydrogel: scaffold for nanoparticle synthesis. J PHYS ORG CHEM 2019. [DOI: 10.1002/poc.4026] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Tanmoy Kar
- Department of ChemistryVivekananda Mission Mahavidyalaya Chaitanyapur, Haldia West Bengal India
| | - Nitai Patra
- Centre for Surface Science, Physical Chemistry Section, Department of ChemistryJadavpur University Kolkata West Bengal India
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Synthesis, Structures and Co-Crystallizations of Perfluorophenyl Substituted β-Diketone and Triketone Compounds. CRYSTALS 2019. [DOI: 10.3390/cryst9030175] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Abstract
Perfluorophenyl-substituted compounds, 3-hydroxy-1,3-bis(pentafluorophenyl)-2- propen-1-one (H1) and 1,5-dihydroxy-1,5-bis(pentafluorophenyl)-1,4-pentadien-3-one (H22), were prepared in 56 and 30% yields, respectively, and only the enol forms were preferentially obtained among the keto-enol tautomerism. Molecular conformations and tautomerism of the fluorine-substituted compounds were certified based on X-ray crystallographic studies and density functional calculations. The solvent dependency of the absorption spectra was only observed for the fluorinated compounds. The compounds H1 and H22 quantitatively formed co-crystals with the corresponding non-perfluorinated compounds, dibenzoylmethane (H3) and 1,5-dihydroxy-1,5-diphenyl-1,4-pentadien-3-one (H24), respectively, through the arene–perfluoroarene interaction to give the 1:1 co-crystals H1•H3 and H22•H24, which were characterized by X-ray crystallographic and elemental analysis studies.
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Maiti B, Bhattacharjee S, Bhattacharya S. Palladium-induced transformation of nematic liquid crystals to robust metallogel comprising self-assembled nanowires. Chem Commun (Camb) 2019; 55:12651-12654. [DOI: 10.1039/c9cc05517g] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
Abstract
Transformation of nematic liquid crystals to metallogels.
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Affiliation(s)
- Bappa Maiti
- Department of Organic Chemistry
- Indian Institute of Science
- Bangalore 560012
- India
- School of Applied & Interdisciplinary Sciences
| | | | - Santanu Bhattacharya
- Department of Organic Chemistry
- Indian Institute of Science
- Bangalore 560012
- India
- School of Applied & Interdisciplinary Sciences
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