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Zuchowicz N, Liu Y, Monroe WT, Tiersch TR. An automated modular open-technology device to measure and adjust concentration of aquatic sperm samples for cryopreservation. SLAS Technol 2023; 28:43-52. [PMID: 36455857 PMCID: PMC9969519 DOI: 10.1016/j.slast.2022.11.002] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2022] [Revised: 09/29/2022] [Accepted: 11/24/2022] [Indexed: 11/30/2022]
Abstract
Repositories for aquatic germplasm are essential for safeguarding valuable genetic diversity for species relevant to aquaculture, biomedical research, and conservation. Development of aquatic germplasm repositories is impeded by a lack of standardization within laboratories and across the research community. Protocols for cryopreservation are often developed ad hoc and without close attention to variables, such as cell concentration, that strongly affect the success and reproducibility of cryopreservation. The wide dissemination and use of specialized tools and devices as open hardware can improve processing reliability and save costs. The goal of the present work was to develop and prototype a modular and open-technology approach to help to standardize the cell concentration of germplasm samples prior to cryopreservation. The specific objectives were to: 1) design and fabricate prototypes of the automated concentration measurement and adjustment system (CMAS), incorporating custom peristaltic pumps and optical evaluation modules, and 2) evaluate the performance of the CMAS with biological samples. Linear regression models were obtained for estimation of aquatic sperm concentration >108 cells/mL and for algae concentration > (3 × 105) cells/mL. Algae were diluted with extender medium by an automated process, resulting in a dilution precision of ±12.6% and ±6.7% in two trials, attaining means of 89% and 71% of the target cell concentration. The development of the CMAS as open technology can provide opportunities for community-level standardization in cryopreservation of aquatic germplasm and can invite new users, makers, and developers into the open-technology community. This will increase the reach and capabilities of much-needed aquatic germplasm repositories.
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Affiliation(s)
- Nikolas Zuchowicz
- Aquatic Germplasm and Genetic Resources Center, School of Renewable Natural Resources, Louisiana State University Agricultural Center, Baton Rouge, LA, USA
| | - Yue Liu
- Aquatic Germplasm and Genetic Resources Center, School of Renewable Natural Resources, Louisiana State University Agricultural Center, Baton Rouge, LA, USA; Department of Biological and Agricultural Engineering, Louisiana State University & Louisiana State University Agricultural Center, Baton Rouge, LA, USA
| | - W Todd Monroe
- Department of Biological and Agricultural Engineering, Louisiana State University & Louisiana State University Agricultural Center, Baton Rouge, LA, USA
| | - Terrence R Tiersch
- Aquatic Germplasm and Genetic Resources Center, School of Renewable Natural Resources, Louisiana State University Agricultural Center, Baton Rouge, LA, USA.
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Open-source multi-purpose sensor for measurements in continuous capillary flow. J Flow Chem 2021. [DOI: 10.1007/s41981-021-00214-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
Abstract
Abstract
Limited applicability and scarce availability of analytical equipment for micro- and millifluidic applications, which are of high interest in research and development, complicate process development, control, and monitoring. The low-cost sensor presented in this work is a modular, fast, non-invasive, multi-purpose, and easy to apply solution for detecting phase changes and concentrations of optically absorbing substances in single and multi-phase capillary flow. It aims at generating deeper insight into existing processes in fields of (bio-)chemical and reaction engineering. The scope of this work includes the application of the sensor to residence time measurements in a heat exchanger, a tubular reactor for concentration measurements, a tubular crystallizer for suspension detection, and a pipetting robot for flow automation purposes. In all presented applications either the level of automation has been increased or more information on the investigated system has been gained. Further applications are explained to be realized in the near future.
Article highlights
• An affordable multipurpose sensor for phase differentiation, concentration measurements, and process automation has been developed and characterized
• The sensor is easily modified and can be applied to various tubular reaction/process units for analytical and automation purposes
• Simple integration into existing process control systems is possible
Graphical abstract
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Morin MA, Zhang W(P, Mallik D, Organ MG. Sampling and Analysis in Flow: The Keys to Smarter, More Controllable, and Sustainable Fine‐Chemical Manufacturing. Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202102009] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Affiliation(s)
- Mathieu A. Morin
- Department of Chemistry and Biomolecular Sciences Centre for Catalysis Research and Innovation (CCRI) University of Ottawa 10 Marie Curie Ottawa ON K1N 6N5 Canada
- Department of Chemistry Carleton University 203 Steacie Building, 1125 Colonel By Drive Ottawa ON K1S 5B6 Canada
| | - Wenyao (Peter) Zhang
- Department of Chemistry York University 4700 Keele Street Toronto ON M3J 1P3 Canada
| | - Debasis Mallik
- Department of Chemistry and Biomolecular Sciences Centre for Catalysis Research and Innovation (CCRI) University of Ottawa 10 Marie Curie Ottawa ON K1N 6N5 Canada
| | - Michael G. Organ
- Department of Chemistry and Biomolecular Sciences Centre for Catalysis Research and Innovation (CCRI) University of Ottawa 10 Marie Curie Ottawa ON K1N 6N5 Canada
- Department of Chemistry York University 4700 Keele Street Toronto ON M3J 1P3 Canada
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Morin MA, Zhang WP, Mallik D, Organ MG. Sampling and Analysis in Flow: The Keys to Smarter, More Controllable, and Sustainable Fine-Chemical Manufacturing. Angew Chem Int Ed Engl 2021; 60:20606-20626. [PMID: 33811800 DOI: 10.1002/anie.202102009] [Citation(s) in RCA: 26] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2021] [Revised: 03/23/2021] [Indexed: 11/08/2022]
Abstract
Process analytical technology (PAT) is a system designed to help chemists better understand and control manufacturing processes. PAT systems operate through the combination of analytical devices, reactor control elements, and mathematical models to ensure the quality of the final product through a quality by design (QbD) approach. The expansion of continuous manufacturing in the pharmaceutical and fine-chemical industry requires the development of PAT tools suitable for continuous operation in the environment of flow reactors. This requires innovative approaches to sampling and analysis from flowing media to maintain the integrity of the reactor content and the analyte of interest. The following Review discusses examples of PAT tools implemented in flow chemistry for the preparation of small organic molecules, and applications of self-optimization tools.
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Affiliation(s)
- Mathieu A Morin
- Department of Chemistry and Biomolecular Sciences, Centre for Catalysis Research and Innovation (CCRI), University of Ottawa, 10 Marie Curie, Ottawa, ON, K1N 6N5, Canada.,Department of Chemistry, Carleton University, 203 Steacie Building, 1125 Colonel By Drive, Ottawa, ON, K1S 5B6, Canada
| | - Wenyao Peter Zhang
- Department of Chemistry, York University, 4700 Keele Street, Toronto, ON, M3J 1P3, Canada
| | - Debasis Mallik
- Department of Chemistry and Biomolecular Sciences, Centre for Catalysis Research and Innovation (CCRI), University of Ottawa, 10 Marie Curie, Ottawa, ON, K1N 6N5, Canada
| | - Michael G Organ
- Department of Chemistry and Biomolecular Sciences, Centre for Catalysis Research and Innovation (CCRI), University of Ottawa, 10 Marie Curie, Ottawa, ON, K1N 6N5, Canada.,Department of Chemistry, York University, 4700 Keele Street, Toronto, ON, M3J 1P3, Canada
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Davis JJ, Foster SW, Grinias JP. Low-cost and open-source strategies for chemical separations. J Chromatogr A 2021; 1638:461820. [PMID: 33453654 PMCID: PMC7870555 DOI: 10.1016/j.chroma.2020.461820] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2020] [Revised: 12/12/2020] [Accepted: 12/14/2020] [Indexed: 12/18/2022]
Abstract
In recent years, a trend toward utilizing open access resources for laboratory research has begun. Open-source design strategies for scientific hardware rely upon the use of widely available parts, especially those that can be directly printed using additive manufacturing techniques and electronic components that can be connected to low-cost microcontrollers. Open-source software eliminates the need for expensive commercial licenses and provides the opportunity to design programs for specific needs. In this review, the impact of the "open-source movement" within the field of chemical separations is described, primarily through a comprehensive look at research in this area over the past five years. Topics that are covered include general laboratory equipment, sample preparation techniques, separations-based analysis, detection strategies, electronic system control, and software for data processing. Remaining hurdles and possible opportunities for further adoption of open-source approaches in the context of these separations-related topics are also discussed.
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Affiliation(s)
- Joshua J Davis
- Department of Chemistry & Biochemistry, Rowan University, Glassboro, NJ 08028, United States
| | - Samuel W Foster
- Department of Chemistry & Biochemistry, Rowan University, Glassboro, NJ 08028, United States
| | - James P Grinias
- Department of Chemistry & Biochemistry, Rowan University, Glassboro, NJ 08028, United States.
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Abstract
Photochemical transformations of molecular building blocks have become an important and widely recognized research field in the past decade. Detailed and deep understanding of novel photochemical catalysts and reaction concepts with visible light as the energy source has enabled a broad application portfolio for synthetic organic chemistry. In parallel, continuous-flow chemistry and microreaction technology have become the basis for thinking and doing chemistry in a novel fashion with clear focus on improved process control for higher conversion and selectivity. As can be seen by the large number of scientific publications on flow photochemistry in the recent past, both research topics have found each other as exceptionally well-suited counterparts with high synergy by combining chemistry and technology. This review will give an overview on selected reaction classes, which represent important photochemical transformations in synthetic organic chemistry, and which benefit from mild and defined process conditions by the transfer from batch to continuous-flow mode.
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Affiliation(s)
- Thomas H. Rehm
- Division Energy & Chemical Technology/Flow Chemistry GroupFraunhofer Institute for Microengineering and Microsystems IMMCarl-Zeiss-Straße 18–2055129MainzGermany
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Affiliation(s)
- Thomas H. Rehm
- Division Energy & Chemical Technology / Flow Chemistry GroupFraunhofer Institute for Microengineering and Microsystems IMM Carl-Zeiss-Straße 18–20 55129 Mainz Germany
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Lebl R, Cantillo D, Kappe CO. Continuous generation, in-line quantification and utilization of nitrosyl chloride in photonitrosation reactions. REACT CHEM ENG 2019. [DOI: 10.1039/c8re00323h] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
The reagent is prepared from stable, inexpensive and readily available starting materials. In-line UV/vis monitoring enables determination of the reagent's concentration after a continuous extraction and liquid–liquid separation sequence.
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Affiliation(s)
- René Lebl
- Center for Continuous Flow Synthesis and Processing (CCFLOW)
- Research Center Pharmaceutical Engineering GmbH (RCPE)
- 8010 Graz
- Austria
- Institute of Chemistry
| | - David Cantillo
- Center for Continuous Flow Synthesis and Processing (CCFLOW)
- Research Center Pharmaceutical Engineering GmbH (RCPE)
- 8010 Graz
- Austria
- Institute of Chemistry
| | - C. Oliver Kappe
- Center for Continuous Flow Synthesis and Processing (CCFLOW)
- Research Center Pharmaceutical Engineering GmbH (RCPE)
- 8010 Graz
- Austria
- Institute of Chemistry
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