Microfluidic curved-channel centrifuge for solution exchange of target microparticles and their simultaneous separation from bacteria

Simultaneous high-throughput particle-bacteria separation and solution exchange via in-plane and out-of-plane parallelization of microfluidic centrifuges

Inertial microfluidic devices have gained attention for point-of-need (PoN) sample preparation. Yet, devices capable of simultaneous particle-bacteria solution exchange and separation are low in throughput, hindering their applicability to PoN settings. This paper introduces a microfluidic centrifuge for high-throughput solution exchange and separation of microparticles, addressing the need for processing large sample volumes at elevated flow rates. The device integrates Dean flow recirculation and inertial focusing of microparticles within 24 curved microchannels assembled in a three-layer configuration via in-plane and out-of-plane parallelization. We studied solution exchange and particle migration using singleplex and duplex samples across devices with varying curve numbers (2-curve, 8-curve, and 24-curve). Processing 5 and 10 μm microparticles at flow rates up to 16.8 ml/min achieved a solution exchange efficiency of 96.69%. In singleplex solutions, 10 and 5 μm particles selectively migrated to inner and outer outlets, demonstrating separation efficiencies of 99.7% and 90.3%, respectively. With duplex samples, sample purity was measured to be 93.4% and 98.6% for 10 and 5 μm particles collected from the inner and the outer outlets, respectively. Application of our device in biological assays was shown by performing duplex experiments where 10 μm particles were isolated from Salmonella bacterial suspension with purity of 97.8% while increasing the state-of-the-art particle solution exchange and separation throughput by 16 folds. This parallelization enabled desirable combinations of high throughput, low-cost, and scalability, without compromising efficiency and purity, paving the way for sample preparation at the PoN in the future.

Efficient bioparticle extraction using a miniaturized inertial microfluidic centrifuge

Conventional bioparticle extraction requires labor-intensive operation, and expensive and bulky centrifuges. Herein, we report a miniaturized centrifuge by cascading four paralleled inertial spiral channels with a two-stage serpentine channel, allowing for the efficient washing and acquisition of concentrated bioparticles from background fluids. First, the effects of channel size and flow rate on particle focusing dynamics and solution exchange performances are explored to enable the optimization and wide application of our device. Then, the integrated device is fabricated and tested experimentally. The results indicate that 10-20 μm particles can be washed from the original samples with increased concentrations and with recovery efficiencies of >93%. Finally, to verify its versatility, we use our miniaturized centrifuge to successfully change the culture medium for cultured MCF-7 breast cancer cells, extract A549 lung cancer cells from a calcein-AM staining solution, purify white blood cells (WBCs) from lysed whole blood, and extract target cells from an unbonded magnetic microbead background. Compared with conventional centrifuges, our device has the advantages of simple fabrication, easy operation, and small footprint. More importantly, it offers outstanding capability for extracting bioparticles from various background fluids, and avoids bioparticle damage that may be caused by high-speed centrifugation. Therefore, we envision that our miniaturized centrifuge could be a promising alternative to traditional centrifuges in many applications.

Electro-osmotic peristaltic flow and heat transfer in an ionic viscoelastic fluid through a curved micro-channel with viscous dissipation

Emerging systems in microfluidics are embracing bio-inspired designs in which boundaries are flexible and mimic peristaltic propulsion mechanisms encountered in nature. These devices utilize electro-kinetic body forces to manipulate very precisely ionic biofluids for a range of medical applications including. Motivated by exploring in more detail electro-hemorheological micro-pumping, in the current article, a mathematical model is developed for peristalsis propulsion of a viscoelastic biofluid in a curved microchannel with electro-osmotic effect and thermal transport under static axial electrical field and with viscous heating. The third grade Reiner-Rivlin model is deployed for blood rheology. The novelty of the current work is therefore the simultaneous consideration of electrokinetics, viscoelastic behavior with the third grade Reiner-Rivlin model and coupled flow and heat transport with viscous dissipation in peristaltic pumping in a curved micro-channel. A Poisson-Boltzmann formulation is adopted to simulate the charge number density associated with the electrical potential. Asymmetric zeta potential (25 mV) is prescribed and mobilizes an electric double layer (EDL). The governing conservation equations for mass, energy, momentum and electrical potential with associated boundary conditions are simplified using lubrication approximations and rendered dimensionless via appropriate scaling transformations. Analytical solutions are derived in the form of Bessel functions and numerical evaluations are conducted via the ND solver command in MATHEMATICA symbolic software. The simulations show that with stronger viscoelastic effect, boluses are eliminated and there is relaxation in streamlines in the core and peripheral regions of the micro-channel. Increasing Brinkman number (dissipation parameter) elevates temperatures. An increase in electrical double layer thickness initially produces a contraction in the upper bolus and an expansion (lateral) in the lower bolus in the micro-channel. With modification in zeta potential ratio parameter from positive to negative values, in the lower half of the micro-channel, axial flow deceleration is generated.

Inertial focusing of microparticles, bacteria, and blood in serpentine glass channels

Early detection of pathogenic microorganisms is pivotal to diagnosis and prevention of health and safety crises. Standard methods for pathogen detection often rely on lengthy culturing procedures, confirmed by biochemical assays, leading to >24 h for a diagnosis. The main challenge for pathogen detection is their low concentration within complex matrices. Detection of blood-borne pathogens via techniques such as PCR requires an initial positive blood culture and removal of inhibitory blood components, reducing its potential as a diagnostic tool. Among different label-free microfluidic techniques, inertial focusing on microscale channels holds great promise for automation, parallelization, and passive continuous separation of particles and cells. This work presents inertial microfluidic manipulation of small particles and cells (1-10 μm) in curved serpentine glass channels etched at different depths (deep and shallow designs) that can be exploited for (1) bacteria preconcentration from biological samples and (2) bacteria-blood cell separation. In our shallow device, the ability to focus Escherichia coli into the channel side streams with high recovery (89% at 2.2× preconcentration factor) could be applied for bacteria preconcentration in urine for diagnosis of urinary tract infections. Relying on differential equilibrium positions of red blood cells and E. coli inside the deep device, 97% red blood cells were depleted from 1:50 diluted blood with 54% E. coli recovered at a throughput of 0.7 mL/min. Parallelization of such devices could process relevant volumes of 7 mL whole blood in 10 min, allowing faster sample preparation for downstream molecular diagnostics of bacteria present in bloodstream.

Integration of microfluidic sample preparation with PCR detection to investigate the effects of simultaneous DNA-Inhibitor separation and DNA solution exchange

In this paper, we applied a curved-channel microfluidic device to separate DNA from PCR-inhibitor-containing water and simultaneously wash them into clean water for detection using a portable PCR thermocycler. Environmental DNA (eDNA) sampling has become an effective surveying approach for detecting rare organisms. However, low concentration eDNA molecules may be masked by PCR inhibitors during amplification and detection, increasing the risk of false negatives. Therefore, technologies for on-site DNA separation and washing are urgently needed. Our device consisted of a half-circle microchannel with a DNA-inhibitor sample inlet, a clean buffer inlet, and multiple outlets. By using the flow-induced inertial forces, 10 μm DNA-conjugated microparticles were focused at the inner-wall of the curved microchannel while separation from 1 μm inhibitor-conjugated microparticles and DNA washing were achieved simultaneously with the Dean flow. We achieved singleplex focusing, isolation and washing of 10 μm particles at an efficiency of 94.5 ± 2.0%. In duplex experiments with 1 μm and 10 μm particles, larger particles were washed with an efficiency of 92.1 ± 1.6% and a purity of 79 ± 2%. By surface-functionalizing the microparticles with affinity groups against Atlantic salmon DNA and humic acid (HA), and processing samples of various concentrations in our device, we achieved an effective purification and detection of DNA molecules using the portable PCR thermocycler. Our method significantly decreased PCR quantitation cycles from Cq > 38 to Cq = 30.35 ± 0.5, which confirmed enhancement of PCR amplification. The proposed device takes a promising step forward in sample preparation towards an integrated device that can be used for simultaneous purification and solution exchange of DNA in point-of-need environmental monitoring applications.

Numerical Study of Paramagnetic Elliptical Microparticles in Curved Channels and Uniform Magnetic Fields

We numerically investigated the dynamics of a paramagnetic elliptical particle immersed in a low Reynolds number Poiseuille flow in a curved channel and under a uniform magnetic field by direct numerical simulation. A finite element method, based on an arbitrary Lagrangian-Eulerian approach, analyzed how the channel geometry, the strength and direction of the magnetic field, and the particle shape affected the rotation and radial migration of the particle. The net radial migration of the particle was analyzed after executing a π rotation and at the exit of the curved channel with and without a magnetic field. In the absence of a magnetic field, the rotation is symmetric, but the particle-wall distance remains the same. When a magnetic field is applied, the rotation of symmetry is broken, and the particle-wall distance increases as the magnetic field strength increases. The causation of the radial migration is due to the magnetic angular velocity caused by the magnetic torque that constantly changes directions during particle transportation. This research provides a method of magnetically manipulating non-spherical particles on lab-on-a-chip devices for industrial and biological applications.

Sorting of Particles Using Inertial Focusing and Laminar Vortex Technology: A Review

The capability of isolating and sorting specific types of cells is crucial in life science, particularly for the early diagnosis of lethal diseases and monitoring of medical treatments. Among all the micro-fluidics techniques for cell sorting, inertial focusing combined with the laminar vortex technology is a powerful method to isolate cells from flowing samples in an efficient manner. This label-free method does not require any external force to be applied, and allows high throughput and continuous sample separation, thus offering a high filtration efficiency over a wide range of particle sizes. Although rather recent, this technology and its applications are rapidly growing, thanks to the development of new chip designs, the employment of new materials and microfabrication technologies. In this review, a comprehensive overview is provided on the most relevant works which employ inertial focusing and laminar vortex technology to sort particles. After briefly summarizing the other cells sorting techniques, highlighting their limitations, the physical mechanisms involved in particle trapping and sorting are described. Then, the materials and microfabrication methods used to implement this technology on miniaturized devices are illustrated. The most relevant evolution steps in the chips design are discussed, and their performances critically analyzed to suggest future developments of this technology.