1
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Jeilani YA, Van Duong L, Al Qahtani OMS, Nguyen MT. A reinvestigation of the boron cluster B 15+/0/-: a benchmark of density functionals and consideration of aromaticity models. Phys Chem Chem Phys 2024; 26:11347-11359. [PMID: 38566485 DOI: 10.1039/d4cp00077c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/04/2024]
Abstract
This study presents a thorough reinvestigation of the B15+/0/- isomers, first employing coupled-cluster theory CCSD(T) calculations to validate the performance of different DFT functionals. The B15+ cation has two planar lowest-lying isomers, while the first 3D isomer is less stable than the global minimum by ∼10 kcal mol-1. The PBE functional, within this benchmark survey, has proved to be reliable in predicting relative energies for boron isomers. Other functionals such as the TPSSh, PBE0 and HSE06 result in good energy ordering of isomers but warrant reconsideration when distinguishing between 2D and 3D forms. Caution is needed for structures having high spin contamination, as it may lead to significant errors. The anomalously lower stability of the B15- anion with respect to its neighbours, in terms of electron detachment energy, was explained through a competition between both rectangle and disk models for its geometry. This elucidates its stability with 12 electrons in rectangle model and instability with 10 electrons in disk-shaped structure, emphasizing the value of employing such geometric models. The proximity of the σ* LUMO to the π HOMO also contributes to the weakening of the B15- stability.
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Affiliation(s)
| | - Long Van Duong
- Atomic Molecular and Optical Physics Research Group, Science and Technology Advanced Institute, Van Lang University, Ho Chi Minh City, Vietnam.
- Faculty of Applied Technology, School of Technology, Van Lang University, Ho Chi Minh City, Vietnam
| | | | - Minh Tho Nguyen
- Laboratory of Chemical Computation and Modeling, Institute for Computational Science and Artificial Intelligence, Van Lang University, Ho Chi Minh City, Vietnam
- Faculty of Applied Technology, School of Technology, Van Lang University, Ho Chi Minh City, Vietnam
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2
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Duong LV, Tri NN, Hung NP, Nguyen MT. Boron Silicon B 2Si 3q and B 3Si 2p Clusters: The Smallest Aromatic Ribbons. J Phys Chem A 2022; 126:3101-3109. [PMID: 35548930 DOI: 10.1021/acs.jpca.2c00540] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The small binary boron silicon clusters B2Si3q with q going from -2 to +2 and B3Si2p with p varying from -3 to +1 were reinvestigated using quantum chemical methods. The thermodynamic stability of these smallest ribbon structures is governed by both Hückel and ribbon models for aromaticity. The more negative the cluster charge, the more ribbon character is shown. In contrast, the more positive the charge state, the more pronounced the Hückel character becomes. The ribbon aromaticity character can also be classified into ribbon aromatic, semiaromatic, antiaromatic, and triplet aromatic when the electron configuration of a ribbon structure is described as [...π2(n+1)σ2n], [...π2n+1σ2n], [...π2nσ2n], and [...π2n+1σ2n-1], respectively. Geometry optimizations of the B2Si3 lowest-energy structure by some density functional theory (DFT) functionals result in a nonplanar shape because it possesses an antiaromatic ribbon character. However, its π aromaticity assigned by the Hückel rule is stronger in such a way that several other DFT and coupled-cluster theory CCSD(T) calculations show that B2Si3 is indeed stable in a planar form (Cs). A new global equilibrium structure for the anion B2Si32-, which is a ribbon semiaromatic species, was identified. Some benchmark tests were also carried out to evaluate the performance of popular methods for the treatment of binary B-Si clusters. At odds with some previous studies, we found that with reference to the high accuracy CCSD(T)/CBS method, the hybrid TPSSh functional is reliable for a structure search, whereas the hybrid B3LYP functional is more suitable for simulations of some experimental spectroscopic results.
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Affiliation(s)
- Long Van Duong
- Laboratory for Computational Molecular and Materials Sciences, Science and Technology Advanced Institute, Van Lang University, Ho Chi Minh City 700000, Vietnam.,Faculty of Technology, Van Lang University, Ho Chi Minh City 700000, Vietnam
| | - Nguyen Ngoc Tri
- Department of Chemistry, Faculty of Natural Sciences, Quy Nhon University, Quy Nhon 55100, Vietnam
| | - Nguyen Phi Hung
- Department of Chemistry, Faculty of Natural Sciences, Quy Nhon University, Quy Nhon 55100, Vietnam
| | - Minh Tho Nguyen
- Institute for Computational Science and Technology (ICST), Quang Trung Software City, Ho Chi Minh City 700000, Vietnam
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3
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Li PF, Zhai HJ. Structures and chemical bonding of boron-based B 12O and B 11Au clusters. A counterexample in boronyl chemistry. Phys Chem Chem Phys 2022; 24:10952-10961. [PMID: 35466336 DOI: 10.1039/d2cp01277d] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Boron oxide clusters have structural diversity and unique chemical bonding, and recent literature has shown that boronyl complexes dominate boron-rich oxide clusters. A counterexample in boronyl chemistry is presented in this work. Using global structural searches, electronic structure calculations, and chemical bonding analyses, we shall report on the computational design of two boron-based quasi-planar or planar clusters: B12O and B11Au. Contrary to expectation, the B12O cluster has a circular quasi-planar shape with a peripheral B-O-B bridge, which resembles bare B12 cluster. It does not contain a boronyl ligand. The isomeric boronyl complex turns out to be 10.32 kcal mol-1 higher in energy at the single-point CCSD(T) level. In contrast, B11Au cluster behaves normally with an elongated B11 moiety and a terminal Au ligand. Chemical bonding analyses reveal three-fold π/σ aromaticity in circular B12O cluster, including global 6π aromaticity, as well as spatially isolated inner 2σ aromaticity and outer 10σ aromaticity. The three-fold 6π/2σ/10σ aromaticity underlies the stability of B12O cluster. This bonding picture is unknown for bare B12 cluster and its derivatives. The elongated B11Au cluster has conflicting π/σ aromaticity (with 6π versus 8σ electron-counting). The B12O cluster is actually isoelectronic with bare B12 cluster in terms of delocalized π/σ bonding, which inherits the structural and electronic robustness of the latter.
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Affiliation(s)
- Peng-Fei Li
- Nanocluster Laboratory, Institute of Molecular Science, Shanxi University, Taiyuan 030006, China.
| | - Hua-Jin Zhai
- Nanocluster Laboratory, Institute of Molecular Science, Shanxi University, Taiyuan 030006, China.
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Moreira EMI, Brito BGA, Hai GQ, Cândido L. Electron correlation effects in boron clusters BQn (for Q = -1, 0, 1 and n ≤ 13) based on quantum Monte Carlo simulations. Phys Chem Chem Phys 2022; 24:3119-3128. [PMID: 35040859 DOI: 10.1039/d1cp04737j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We present all-electron quantum Monte Carlo simulations on the anionic, neutral, and cationic boron clusters BQn with up to 13 atoms (Q = -1, 0, +1 and n ≤ 13). Accurate total energies of these clusters are obtained and an excellent agreement is reached with available experimental results for adiabatic and vertical detachment energies. We also perform very accurate Hartree-Fock calculations in the complete-basis-set limit where electron correlation is absent. In combination with the FN-DMC and HF-CBS results, we quantify the correlation effects and present the first attempt for a systematic investigation on the electron correlation effects in boron clusters. The obtained results show that, in general, electron correlation may contribute significantly to both the atomic and electronic structures of the boron clusters, manifested in the quantities such as the average binding energies of the clusters, atomic dissociation energies, detachment energies, and ionization potentials. For instance, the calculations indicate that the electron correlation maintains the bound state of cationic cluster B2+ and it also contributes 99% of the detachment energy of the anionic cluster B5-.
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Affiliation(s)
- E M Isaac Moreira
- Instituto de Física, Universidade Federal de Goiás, 74001-970, Goiânia, GO, Brazil.
| | - B G A Brito
- Departamento de Física, Instituto de Ciências Exatas e Naturais e Educação (ICENE), Universidade Federal do Triângulo Mineiro, 38064-200, Uberaba, MG, Brazil
| | - G-Q Hai
- Instituto de Física de São Carlos, Universidade de São Paulo, 13560-970, São Carlos, SP, Brazil
| | - L Cândido
- Instituto de Física, Universidade Federal de Goiás, 74001-970, Goiânia, GO, Brazil.
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Barroso J, Pan S, Merino G. Structural transformations in boron clusters induced by metal doping. Chem Soc Rev 2022; 51:1098-1123. [PMID: 35029622 DOI: 10.1039/d1cs00747e] [Citation(s) in RCA: 38] [Impact Index Per Article: 19.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
Abstract
In the last decades, experimental techniques in conjunction with theoretical analyses have revealed the surprising structural diversity of boron clusters. Although the 2D to 3D transition thresholds are well-established, there is no certainty about the factors that determine the geometry adopted by these systems. The structural transformation induced by doping usually yields a minimum energy structure with a boron skeleton entirely different from that of the bare cluster. This review summarizes those clusters no larger than 40 boron atoms where one or two dopants show a radical transformation of the structure. Although the structures of these systems are not easy to predict, they often adopt familiar shapes such as umbrella-like, wheel, tubular, and cages in various cases.
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Affiliation(s)
- Jorge Barroso
- Departamento de Física Aplicada, Centro de Investigación y de Estudios Avanzados, Unidad Mérida, km 6 Antigua carretera a Progreso, Apdo. Postal 73, Cordemex 97310, Mérida, Yuc., Mexico.
| | - Sudip Pan
- Departamento de Física Aplicada, Centro de Investigación y de Estudios Avanzados, Unidad Mérida, km 6 Antigua carretera a Progreso, Apdo. Postal 73, Cordemex 97310, Mérida, Yuc., Mexico.
| | - Gabriel Merino
- Departamento de Física Aplicada, Centro de Investigación y de Estudios Avanzados, Unidad Mérida, km 6 Antigua carretera a Progreso, Apdo. Postal 73, Cordemex 97310, Mérida, Yuc., Mexico.
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Zhang NX, Wang C, Wu Q, Lan J, Chai Z, Shi W. Highly stable actinide(III) complexes supported by doubly aromatic ligands. Phys Chem Chem Phys 2022; 24:5921-5928. [DOI: 10.1039/d1cp05058c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Owing to the electron-deficient nature of boron atom, the structures and properties of boron clusters can be enriched by doping various metal atoms, including lanthanide metal atoms. Nevertheless, the viability...
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Kulichenko M, Chen WJ, Zhang YY, Xu CQ, Li J, Wang LS. Double σ-Aromaticity in a Planar Zinc-Doped Gold Cluster: Au 9Zn . J Phys Chem A 2021; 125:4606-4613. [PMID: 34014680 DOI: 10.1021/acs.jpca.1c02954] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The strong relativistic effects result in many interesting chemical and physical properties for gold and gold compounds. One of the most surprising findings has been that small gold clusters prefer planar structures. Dopants can be used to tune the electronic and structural properties of gold nanoclusters. Here we report an experimental and theoretical investigation of a Zn-doped gold cluster, Au9Zn-. Photoelectron spectroscopy reveals that Au9Zn- is a highly stable electronic system with an electron binding energy of 4.27 eV. Quantum chemical studies show that the global minimum of Au9Zn- has a D3h structure with a closed-shell electron configuration (1A1'), which can be viewed as replacing the central Au atom by Zn in the open-shell parent Au10- cluster. The high electronic stability of Au9Zn- is corroborated by its extremely large HOMO-LUMO gap of 3.3 eV. Chemical bonding analyses revealed that the D3h Au9Zn- are bonded by two sets of delocalized σ bonds, giving rise to double σ aromaticity and its remarkable stability. Two planar low-lying isomers are also observed, corresponding to a similar triangular structure with the Zn atom on the edge and another one with one of the corner Au atoms moved to the edge of the triangle.
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Affiliation(s)
- Maksim Kulichenko
- Department of Chemistry and Biochemistry, Utah State University, Logan, Utah 84322, United States
| | - Wei-Jia Chen
- Department of Chemistry, Brown University, Providence, Rhode Island 02912, United States
| | - Yang-Yang Zhang
- Department of Chemistry and Key Laboratory of Organic Optoelectronics & Molecular Engineering of Ministry of Education, Tsinghua University, 100084 Beijing, China
| | - Cong-Qiao Xu
- Department of Chemistry, Southern University of Science and Technology, 518055 Shenzhen, China
| | - Jun Li
- Department of Chemistry and Key Laboratory of Organic Optoelectronics & Molecular Engineering of Ministry of Education, Tsinghua University, 100084 Beijing, China.,Department of Chemistry, Southern University of Science and Technology, 518055 Shenzhen, China
| | - Lai-Sheng Wang
- Department of Chemistry, Brown University, Providence, Rhode Island 02912, United States
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Muya JT, Isamura BK, Patouossa I, Nguyen MT, Ceulemans A. Structure, stability and bonding of the leapfrog B 24 0 ,±1,±2. J Comput Chem 2021; 42:72-80. [PMID: 33063884 DOI: 10.1002/jcc.26434] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2020] [Revised: 08/16/2020] [Accepted: 09/29/2020] [Indexed: 01/16/2023]
Abstract
Two new structural motifs of the B24 clusters are constructed by use of the leapfrog transformation. The resulting leapfrog B24 has either a bowl shape with a square vacancy or a quasi-planar 2D close-packed triangular boron sheet. The neutral and ionic forms of the latter are found to be more stable than their homologous leapfrog bowl clusters, with the exception of the dicationic B24 +2 . While the leapfrog isomer is less stable than the tubular double ring in the neutral state, it becomes competitive in some ionic states. The nucleus independent chemical shift, electron localization function, ring current maps and the electronic structure of leapfrog B24 clusters reveal them to behave as aromatics.
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Affiliation(s)
- Jules Tshishimbi Muya
- Department of Chemistry, Faculty of Sciences, University of Kinshasa, Kinshasa, Democratic Republic of the Congo.,Research Center for Theoretical Chemistry and Physics in Central Africa, Faculty of Science, University of Kinshasa, Kinshasa, Democratic Republic of the Congo.,Department of Chemistry, Hanyang University, Seoul, South Korea
| | - Bienfait Kabuyaya Isamura
- Department of Chemistry, Faculty of Sciences, University of Kinshasa, Kinshasa, Democratic Republic of the Congo.,Research Center for Theoretical Chemistry and Physics in Central Africa, Faculty of Science, University of Kinshasa, Kinshasa, Democratic Republic of the Congo
| | - Issofa Patouossa
- Research Center for Theoretical Chemistry and Physics in Central Africa, Faculty of Science, University of Kinshasa, Kinshasa, Democratic Republic of the Congo.,Faculty of Sciences, Laboratory of Physical and Theoretical Chemistry, University of Yaoundé I, Yaoundé, Cameroon
| | - Minh Tho Nguyen
- Department of Chemistry, KU Leuven, Leuven, Belgium.,Institute for Computational Science and Technology (ICST), Ho Chi Minh City, Vietnam
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Li R, You XR, Zhai HJ. Are all planar and quasi-planar boron clusters aromatic? Counter examples of island or global π antiaromaticity from chemical bonding analysis. Phys Chem Chem Phys 2020; 22:25084-25094. [PMID: 33118576 DOI: 10.1039/d0cp04502k] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Boron is an electron-deficient element. The flatland of planar or quasi-planar (2D) boron clusters is believed to possess aromaticity for all members, which remains a fundamental issue in debate in boron chemistry. Using a selected set of D2h B62-, C2h B282-, and C2v B29- clusters as counter examples, we shall present computational evidence for global or island π antiaromaticity in 2D boron clusters. The latter two are flattened for the purpose of clarity, which model their quasi-planar C2 or Cs monoanion clusters observed in prior gas-phase experiments. Chemical bonding in the clusters is elucidated collectively on the basis of canonical molecular orbital (CMO) analysis, adaptive natural density partitioning (AdNDP), electron localization functions (ELFs), and localized molecular orbital (LMO) analysis. These results are complementary to each other and yet highly coherent. As a quantitative indicator, nucleus-independent chemical shifts (NICSs) are calculated at selected specific points in the clusters, which help differentiate between π aromaticity and antiaromaticity. Intriguingly, triangular sites in the same boron cluster can be aromatic, antiaromatic, or nonaromatic, despite the fact that they are physically indistinguishable. The phenomenon is understood in analogy to hydrocarbons and polycyclic aromatic hydrocarbons (PAHs). Even perfect sheet-like boron clusters are convertible to the PAH analogous systems. This work provides compelling examples for global and island π antiaromaticity in the 2D boron clusters.
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Affiliation(s)
- Rui Li
- Nanocluster Laboratory, Institute of Molecular Science, Shanxi University, Taiyuan 030006, China.
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Shakerzadeh E, Duong LV, Pham-Ho MP, Tahmasebi E, Nguyen MT. The teetotum cluster Li 2FeB 14 and its possible use for constructing boron nanowires. Phys Chem Chem Phys 2020; 22:15013-15021. [PMID: 32597424 DOI: 10.1039/d0cp02046j] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Systematic density functional theory (DFT) calculations using the TPSSh functional and the def2-TZVP basis set were carried out to identify the global energy minimum structure of the Li2FeB14 cluster. Keeping the double ring tubular shape of FeB14, capping of two Li atoms leads to a teetotum form at a low spin state, in which the Fe atom is endohedrally covered by two B7 strings, and both Li atoms are attached to Fe along the C7 axis at both sides. Calculated results show that strong electrostatic interactions between 2Li+ and Fe2- arising from Li electron transfer upon doping particularly provide a key driving force for stabilizing this charge-transfer structure. The bonding pattern of the teetotum can be understood from the hollow cylinder model (HCM). TD-DFT calculations demonstrate that this cluster can also be regarded as a useful material for transparent optoelectronic devices. Furthermore, the Li2FeB14 superatom can be used as a building block for making boron-based nanowires with metallic character. Replacement of Li atoms by Mg atoms was also found to lead to nanowires.
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Affiliation(s)
- Ehsan Shakerzadeh
- Chemistry Department, Faculty of Science, Shahid Chamran University of Ahvaz, Ahvaz, Iran
| | - Long Van Duong
- Institute for Computational Science and Technology (ICST), Ho Chi Minh City, Vietnam and Department of Chemistry, Faculty of Natural Sciences, Quy Nhon University, Quy Nhon City, Vietnam
| | - My Phuong Pham-Ho
- Institute for Computational Science and Technology (ICST), Ho Chi Minh City, Vietnam
| | - Elham Tahmasebi
- Chemistry Department, Faculty of Science, Shahid Chamran University of Ahvaz, Ahvaz, Iran
| | - Minh Tho Nguyen
- Computational Chemistry Research Group, Ton Duc Thang University, Ho Chi Minh City, Vietnam. and Faculty of Applied Sciences, Ton Duc Thang University, Ho Chi Minh City, Vietnam
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