Structural characterization of Janus nanoparticles with tunable geometric and chemical asymmetries by small-angle scattering

Integrating machine learning with α -SAS for enhanced structural analysis in small-angle scattering: applications in biological and artificial macromolecular complexes

Small-Angle Scattering (SAS), encompassing both X-ray (SAXS) and Neutron (SANS) techniques, is a crucial tool for structural analysis at the nanoscale, particularly in the realm of biological macromolecules. This paper explores the intricacies of SAS, emphasizing its application in studying complex biological systems and the challenges associated with sample preparation and data analysis. We highlight the use of neutron-scattering properties of hydrogen isotopes and isotopic labeling in SANS for probing structures within multi-subunit complexes, employing techniques like contrast variation (CV) for detailed structural analysis. However, traditional SAS analysis methods, such as Guinier and Kratky plots, are limited by their partial use of available data and inability to operate without substantial a priori knowledge of the sample's chemical composition. To overcome these limitations, we introduce a novel approach integrating α -SAS, a computational method for simulating SANS with CV, with machine learning (ML). This approach enables the accurate prediction of scattering contrast in multicomponent macromolecular complexes, reducing the need for extensive sample preparation and computational resources. α -SAS, utilizing Monte Carlo methods, generates comprehensive datasets from which structural invariants can be extracted, enhancing our understanding of the macromolecular form factor in dilute systems. The paper demonstrates the effectiveness of this integrated approach through its application to two case studies: Janus particles, an artificial structure with a known SAS intensity and contrast, and a biological system involving RNA polymerase II in complex with Rtt103. These examples illustrate the method's capability to provide detailed structural insights, showcasing its potential as a powerful tool for advanced SAS analysis in structural biology.

Orientational ordering and assembly of silica-nickel Janus particles in a magnetic field

The orientation ordering and assembly behavior of silica-nickel Janus particles in a static external magnetic field were probed by ultra small-angle X-ray scattering (USAXS). Even in a weak applied field, the net magnetic moments of the individual particles aligned in the direction of the field, as indicated by the anisotropy in the recorded USAXS patterns. X-ray photon correlation spectroscopy (XPCS) measurements on these suspensions revealed that the corresponding particle dynamics are primarily Brownian diffusion [Zinn, Sharpnack & Narayanan (2023). Soft Matter, 19, 2311-2318]. At higher fields, the magnetic forces led to chain-like configurations of particles, as indicated by an additional feature in the USAXS pattern. A theoretical framework is provided for the quantitative interpretation of the observed anisotropic scattering diagrams and the corresponding degree of orientation. No anisotropy was detected when the magnetic field was applied along the beam direction, which is also replicated by the model. The method presented here could be useful for the interpretation of oriented scattering patterns from a wide variety of particulate systems. The combination of USAXS and XPCS is a powerful approach for investigating asymmetric colloidal particles in external fields.

Dynamics of magnetic Janus colloids studied by ultra small-angle X-ray photon correlation spectroscopy

The orientation behavior and the translational dynamics of spherical magnetic silica-nickel Janus colloids in an external magnetic field have been studied by small-angle X-ray scattering and X-ray photon correlation spectroscopy at ultra small-angles. For weak applied fields and at low volume fractions, the particle dynamics is dominated by Brownian motion even though the net magnetic moments of the individual particles are aligned in the direction of the field as indicated by the anisotropy in the small-angle scattering patterns. For higher fields the magnetic forces result in more complex structural changes with nickel caps of Janus particles pointing predominantly along the applied magnetic field. The alignment ultimately leads to chain-like configurations and the intensity-intensity autocorrelation functions, g₂(q,t), show a second slower decay which becomes more pronounced at higher volume fractions. A direction dependent analysis of g₂(q,t) revealed a faster than exponential decay perpendicular to the field which is related to the sedimentation of magnetically ordered domains. The corresponding velocity fluctuations could be decoupled from the diffusion of particles by decomposing g₂(q,t) into advective and diffusive contributions. Finally, the particle dynamics becomes anisotropic at higher volume fractions and strong magnetic fields. The derived translational diffusion coefficients indicate slower particle dynamics perpendicular to the field as compared to the parallel direction.

Development of Janus Particles as Potential Drug Delivery Systems for Diabetes Treatment and Antimicrobial Applications

Janus particles have emerged as a novel and smart material that could improve pharmaceutical formulation, drug delivery, and theranostics. Janus particles have two distinct compartments that differ in functionality, physicochemical properties, and morphological characteristics, among other conventional particles. Recently, Janus particles have attracted considerable attention as effective particulate drug delivery systems as they can accommodate two opposing pharmaceutical agents that can be engineered at the molecular level to achieve better target affinity, lower drug dosage to achieve a therapeutic effect, and controlled drug release with improved pharmacokinetics and pharmacodynamics. This article discusses the development of Janus particles for tailored and improved delivery of pharmaceutical agents for diabetes treatment and antimicrobial applications. It provides an account of advances in the synthesis of Janus particles from various materials using different approaches. It appraises Janus particles as a promising particulate system with the potential to improve conventional delivery systems, providing a better loading capacity and targeting specificity whilst promoting multi-drugs loading and single-dose-drug administration.

α-SAS: an integrative approach for structural modeling of biological macromolecules in solution

Modern small-angle scattering (SAS) experiments with neutrons (SANS) or X-rays (SAXS) combined with contrast variation provide comprehensive information about the structure of large multicomponent macromolecules in solution and allow the size, shape and relative arrangement of each component to be mapped out. To obtain such information, it is essential to perform well designed experiments, in which all necessary steps, from assessing sample suitability to structure modeling, are properly executed. This paper describes α-SAS, an integrative approach that is useful for effectively planning a biological contrast-variation SAS experiment. The accurate generation of expected experimental intensities using α-SAS allows the substantial acceleratation of research into the structure and function of biomacromolecules by minimizing the time and costs associated with performing a SAS experiment. The method is validated using a few basic structures with known analytical expressions for scattering intensity and using experimental SAXS data from Arabidopsis β-amylase 1 protein and SANS data from the histidine kinase–Sda complex and from human dystrophin without and with a membrane-mimicking nanodisk. Simulation of a SANS contrast-variation experiment is performed for synthetic nanobodies that effectively neutralize SARS-CoV-2.

Structural Properties of Janus Particles with Nano- and Mesoscale Anisotropy

Synthesis of anisotropic Janus particles (AnJPs) is crucial for understanding the fundamental principles behind non-equilibrium self-organization of cells, bacteria, or enzymes, and for the design of novel multicomponent carriers for guided self-assembly, drug delivery or molecular imaging. Their catalytic activity, as well as many other chemical and physical properties are intimately related to the nano- and mesoscale structure. An efficient and fast in situ monitoring of the structural changes involves non-destructive techniques which can probe macroscopic volumes of multicomponent systems, such as small-angle scattering (SAS). However, the interpretation of scattering data is often a difficult task since the existing models deal only with symmetric AnJPs, thus greatly restricting their applicability. Here, a general theoretical framework is developed, which describes scattering from a system containing randomly oriented and placed two-phase AnJPs with arbitrarily tunable geometric and chemical asymmetries embedded in a solution/matrix of different chemical composition. This approach allows an analytic description of the contrast matching point, and it is shown that the interplay between the scattering curves of the two phases gives rise to a rich scaling behavior which allows extracting structural information about each individual phase. To illustrate the above findings, analytic expression for the scattering curves of asymmetric AnJPs are derived, and the results are validated by Monte-Carlo simulations. The broad general features of the scattering curves are explained by using a simple scaling approach which allows gaining more physical insight into the scattering processes as well as for the interpretation of SAS intensity.