Ex Tenebris Lux: Illuminating Reactive Oxygen and Nitrogen Species with Small Molecule Probes

Reactive oxygen and nitrogen species are small reactive molecules derived from elements in the air─oxygen and nitrogen. They are produced in biological systems to mediate fundamental aspects of cellular signaling but must be very tightly balanced to prevent indiscriminate damage to biological molecules. Small molecule probes can transmute the specific nature of each reactive oxygen and nitrogen species into an observable luminescent signal (or even an acoustic wave) to offer sensitive and selective imaging in living cells and whole animals. This review focuses specifically on small molecule probes for superoxide, hydrogen peroxide, hypochlorite, nitric oxide, and peroxynitrite that provide a luminescent or photoacoustic signal. Important background information on general photophysical phenomena, common probe designs, mechanisms, and imaging modalities will be provided, and then, probes for each analyte will be thoroughly evaluated. A discussion of the successes of the field will be presented, followed by recommendations for improvement and a future outlook of emerging trends. Our objectives are to provide an informative, useful, and thorough field guide to small molecule probes for reactive oxygen and nitrogen species as well as important context to compare the ecosystem of chemistries and molecular scaffolds that has manifested within the field.

Fast, portable, selective, and ratiometric determination of ochratoxin A (OTA) by a fluorescent supramolecular sensor

Ochratoxin A (OTA), a mycotoxin found in various food items, possesses significant health risks due to its carcinogenic and toxic properties. Thus, detecting OTA is crucial to ensure food safety. Among the reported analytical methods, there has yet to be one that achieves fast, selective, and portable detection of OTA. In this study, we explore a novel supramolecular sensor, DOCE@ALB, utilizing human serum albumin as the host and a flavonoid fluorescent indicator as the guest. On the basis of indicator displacement assay, this sensor boasts an ultra-fast response time of just 5 s, high sensitivity with a limit of detection at 0.39 ppb, exceptional selectivity, and a noticeable ratiometric fluorescence response to OTA. This discernible color change and portability of the sensor make it suitable for on-site OTA detection in real food samples, including flour, beer, and wine, simply using a smartphone. In comparison to previously reported methods, our approach has showcased notable advantages in both response time and portability, addressing a critical need for food safety and regulatory compliance.

A Fluorescent Probe with Zwitterionic ESIPT Feature for Ratiometric Monitoring of Peroxynitrite In Vitro and In Vivo

Peroxynitrite (ONOO-), as a short-term reactive biological oxidant, could lead to a series of effects in various physiological and pathological processes due to its subtle concentration changes. In vivo monitoring of ONOO- and relevant physiological processes is urgently required. Herein, we describe a novel fluorescent probe termed HBT-Fl-BnB for the ratiometric detection of ONOO- in vitro and in vivo. The probe consists of an HBT core with Fl groups at the ortho and para positions responding to the zwitterionic excited-state intramolecular proton-transfer (zwitterionic ESIPT) process and a boronic acid pinacol ester with dual roles that block the zwitterionic ESIPT and recognize ONOO-. Thanks to the specificity as well as low cytotoxicity, success in imaging of endogenous and exogenous ONOO- in living cells by HBT-Fl-BnB was obtained. Additionally, the applicability of HBT-Fl-BnB to tracking the abnormal expression of ONOO- in vivo induced by inactivated Escherichia coli was also explored. This is the first report of a fluorescent probe for ONOO- sensing via a zwitterionic ESIPT mechanism.

Endoplasmic Reticulum Peroxynitrite Fluctuations in Hypoxia-Induced Endothelial Injury and Sepsis with a Two-Photon Fluorescence Probe

Sepsis is a serious systemic inflammatory disease that frequently results in death. Early diagnosis and timely targeted interventions could improve the therapeutic effect. Recent work has revealed that the reactive oxygen species (ROS) in the endoplasmic reticulum (ER) and hypoxia-induced endothelial injury play significant roles in sepsis. However, the relationship between the levels of peroxynitrite (ONOO^-) and hypoxia-induced endothelial injury as well as different states of sepsis remain unexplored. Herein, we developed a unique two-photon fluorescent probe (ER-ONOO^-) for detecting ONOO^- in aqueous solution that has high sensitivity, high selectivity, and ultrafast response time. In addition, ER-ONOO^- was successfully used to evaluate the levels of ONOO^- at the ER with three kinds of methods in a hypoxia-induced endothelial injury model. Furthermore, ER-ONOO^- is capable of monitoring the changes in organ fluorescence through ONOO^- variation in different stages of a cecum ligation and puncture (CLP) mouse model. Moreover, we also confirmed that the endoplasmic reticulum stress and oxidative stress participated in the CLP model. Consequently, this research can provide a reliable tool for studying ONOO^- fluctuation in sepsis and provide new insights into the pathogenic and therapeutic mechanisms involved.

Research progress of auxiliary groups in improving the performance of fluorescent probes

In the design work of fluorescent probes, it is important to consider not only the factors of fluorescence properties but also the environment in which the fluorescent molecule works. This requires the design of auxiliary groups to refine the fluorescent molecule. Nowadays, more and more fluorescent molecules are not limited to the traditional fluorescent probe consisting of a fluorophore, linker arm and recognition group, but integrate the three into one, and introduce auxiliary groups where possible. Auxiliary groups are "catalytic groups" that do not interact with the substrate, or "catalyze" the interaction of the recognition group with the substrate. The introduced auxiliary groups can improve the sensitivity and selectivity of the detection to some extent, which has attracted great interest from researchers. Although previous work has focused on this aspect, no one has summarized it systematically and comprehensively. So this review summarizes the role of auxiliary groups that are classified into three categories according to the different mechanisms between the auxiliary groups and the substance, in improving the performance of fluorescent probes in recent years (2012-2022). In particular, we generalize the mechanisms of the auxiliary groups in improving the sensitivity and selectivity of fluorescent probes. Also, the fundamental principles of auxiliary groups to improve the sensitivity and selectivity of fluorescent probes are discussed and future research directions in this field are proposed.

A near-infrared dicyanoisophorone-based fluorescent probe for discriminating HSA from BSA

Despite the rapid development of fluorescent probe techniques for the detection of human serum albumin (HSA), a probe that discriminates between HSA and bovine serum albumin (BSA) is still a challenging task, since their similar chemical structures. As a continuation of our work, herein, a dicyanoisophorone-based fluorescent probe DCO2 is systematically studied for discrimination of HSA from BSA. The photophysical and sensing performances of DCO2, including basic spectroscopic properties, sensing sensitivity, and selectivity, exhibits that DCO2 could selectively bind with HSA and display remarkable fluorescence enhancement (∼254-fold) at 685 nm. The gap of the fluorescent response of DCO2 between HSA and BSA is an obvious increase from 21% to 73% compared to the previous probe DCO1. The sensing mechanism was elucidated by Job's plot, displacement experiment, and molecular docking, suggesting that the specific response to HSA originated from the rigid donor structure and steric hindrance. DCO2 could be buried in the DS1 pocket of HSA, and only partly wedged into the DS1 pocket of BSA with exposing twisted N,N-diethylamino group outside. Application studies indicated that DCO2 has well detective behavior for HSA in the biological fluids. This work could provide a new approach to design HSA-specific near-infrared fluorescence probes.

A dual-responsive probe for the simultaneous monitoring of viscosity and peroxynitrite with different fluorescence signals in living cells

We developed a dual-responsive fluorescent probe MC-V-P for the simultaneous detection of ONOO^- and viscosity by different imaging channels. MC-V-P has high sensitivity and selectivity, and shows good stability at different pH levels. Notably, the probe has two independent fluorescence signals toward ONOO^- and viscosity changes at 580 nm and 740 nm, respectively. Cell imaging experiment results demonstrated that MC-V-P exhibits low cytotoxicity and could be used to monitor viscosity and ONOO^- in living HepG2 cells simultaneously.

Visualization of peroxynitrite in cyclophosphamide-induced oxidative stress by an activatable probe

Oxidative stress is considered to be one of the main contributors of cyclophosphamide (CP)-induced toxicity, and the generation of free radicals will cause the interruption of multiple signal transduction pathways. Peroxynitrite (ONOO^-) has strong oxidation and nitrification ability and is considered as an indirect indicator of oxidative stress. Therefore, it is necessary to design a fluorescent probe that can detect ONOO^- and monitor CP-induced oxidative stress during chemotherapy. Herein, we synthesized a lipid droplet targeting fluorescent probe SX-1 based on triphenylamine-benzoindocyanine. When ONOO^- is added to the probe SX-1, the CC bond in the probe is broken, thereby releasing fluorescence. The good spectral response characteristics enable SX-1 to successfully track the fluctuations of ONOO^- in living cells. Most importantly, we provided the first visual evidence that the level of ONOO^- in HeLa cells was up-regulated under CP induction. All results indicated that SX-1 has great potential in detecting drug-induced ONOO^-, and provided a new detection tool for a deeper understanding of drug-induced organism injury.

FRET-based dual-labeled oligonucleotide probe detects target DNA by probing a minor groove environment

A novel amino-modifier ESF nucleoside AM37zA (1) containing trifluoroacetyl (TFA)-protected amino group is designed for the functionalization of ODN probe after oligonucleotide synthesis. AM37zA (1) demonstrated remarkable solvatochromicity and ODN...

A novel fluorescent probe for the detection of peroxynitrite and its application in acute liver injury model

Realizing the early diagnosis of acute liver injury has become a hotspot in recent years. Since the current indexes are not specific, developing novel probes with new recognition group remains a necessity. In this work, we developed a novel fluorescent probe, NNP, for the detection of ONOO⁻ in acute liver injury (ALI). The in vitro evaluation of NNP indicated the advantages including high sensitivity (LOD = 0.13 μM), rapid response (<25 s), naked-eye (red to yellow), and stability under various pH (4–10) and time (>48 h) conditions. Accordingly, NNP achieved the dose-dependent detection of ONOO⁻ in human hepatic stellate LX-2 cells. Further, in the ALI model mice, NNP could monitor the ONOO⁻ level in the occurrence of ALI in situ (in the liver region) with a steady performance. Subsequent immunohistochemical and imaging studies confirmed that NNP could achieve the detection of endogenous ONOO⁻ in ALI liver tissues. This work introduced a practical implement for the ONOO⁻ detection in ALI as well as a referable example for the establishment of molecular indexes in pre-clinical diagnosis.

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A novel fluorescent probe, NNP, for the detection of ONOO⁻ in acute liver injury model.

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High sensitivity, high selectivity, rapid response and steadiness for over 48 h.

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Applications in human hepatic stellate cell line for cellular imaging of ONOO⁻ level.

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Achieving the detection of endogenous ONOO⁻ in mice and liver tissues.