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Nishijima M, Kobayashi K, Masuda-Endo M, Yoda H, Koike-Takeshita A. Regioselective photocyclodimerization of 2-anthracenecarboxylic acid through ATP hydrolysis-driven conformational change using simulation prediction-designed GroEL mutant. J Biosci Bioeng 2024:S1389-1723(24)00191-9. [PMID: 39097441 DOI: 10.1016/j.jbiosc.2024.07.002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2023] [Revised: 06/25/2024] [Accepted: 07/01/2024] [Indexed: 08/05/2024]
Abstract
GroEL, a chaperone protein responsible for peptide and denatured protein folding, undergoes substantial conformational changes driven by ATP binding and hydrolysis during folding. Utilizing these conformational changes, we demonstrated the GroEL-mediated regioselective photocyclodimerization of 2-anthracenecarboxylic acid (AC) using ATP hydrolysis as an external stimulus. We designed and prepared an optimal GroEL mutant to employ in a docking simulation that has been actively used in recent years. Based on the large difference in the motif of hydrogen bonds between AC and GroEL mutant compared with the wild-type, we predicted that GroELMEL, in which the 307‒309th amino acid residues were mutated to Ala, could alter the orientation of bound AC in GroEL. The GroELMEL-mediated photocyclodimerization of AC can be used for regioselective inversion upon ATP addition to a moderate extent.
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Affiliation(s)
- Masaki Nishijima
- National Institute of Technology (KOSEN), Wakayama College, 77 Noshima, Gobo, Wakayama 644-0023, Japan.
| | - Kota Kobayashi
- Department of Applied Chemistry and Bioscience, Graduate School of Engineering, Kanagawa Institute of Technology, 1030 Shimo-ogino, Atsugi, Kanagawa 243-0292, Japan
| | - Megumi Masuda-Endo
- Biomedical Research Center, Kanagawa Institute of Technology, 1030 Shimo-ogino, Atsugi, Kanagawa 243-0292, Japan
| | - Hiromi Yoda
- Department of Applied Chemistry and Bioscience, Graduate School of Engineering, Kanagawa Institute of Technology, 1030 Shimo-ogino, Atsugi, Kanagawa 243-0292, Japan; Biomedical Research Center, Kanagawa Institute of Technology, 1030 Shimo-ogino, Atsugi, Kanagawa 243-0292, Japan
| | - Ayumi Koike-Takeshita
- Department of Applied Chemistry and Bioscience, Graduate School of Engineering, Kanagawa Institute of Technology, 1030 Shimo-ogino, Atsugi, Kanagawa 243-0292, Japan; Biomedical Research Center, Kanagawa Institute of Technology, 1030 Shimo-ogino, Atsugi, Kanagawa 243-0292, Japan
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Kanai H, Yamada K, Salikolimi K, Kodama K, Ishida Y. Supramolecular Architecture of an Amphiphilic Amino Alcohol as a Versatile Chiral Environment for Stereocontrolled Photoreaction of Various Anthracenes. Chemistry 2022; 28:e202201940. [DOI: 10.1002/chem.202201940] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2022] [Indexed: 11/06/2022]
Affiliation(s)
- Hayato Kanai
- RIKEN Center for Emergent Matter Science 2-1 Hirosawa Wako Saitama 351-0198 Japan
- Department of Applied Chemistry Graduate School of Science and Engineering Saitama University 255 Shimo-Okubo, Sakura-ku Saitama 338-8570 Japan
| | - Kuniyo Yamada
- RIKEN Center for Emergent Matter Science 2-1 Hirosawa Wako Saitama 351-0198 Japan
| | | | - Koichi Kodama
- Department of Applied Chemistry Graduate School of Science and Engineering Saitama University 255 Shimo-Okubo, Sakura-ku Saitama 338-8570 Japan
| | - Yasuhiro Ishida
- RIKEN Center for Emergent Matter Science 2-1 Hirosawa Wako Saitama 351-0198 Japan
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Kawasaki Y, Nakagawa M, Ito T, Imura Y, Wang KH, Kawai T. Chiral transcription from chiral Au nanowires to self-assembled monolayers of achiral azobenzene derivatives. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 2022. [DOI: 10.1246/bcsj.20220135] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Yukie Kawasaki
- Department of Industrial Chemistry, Tokyo University of Science, 1-3 Kagurazaka, Shinjuku-ku, Tokyo 162-8601, Japan
| | - Makoto Nakagawa
- Osaka Research Institute of Industrial Science and Technology, 1-6-50 Morinomiya, Joto-ku, Osaka 536-8553, Japan
| | - Tomoki Ito
- Department of Industrial Chemistry, Tokyo University of Science, 1-3 Kagurazaka, Shinjuku-ku, Tokyo 162-8601, Japan
| | - Yoshiro Imura
- Department of Industrial Chemistry, Tokyo University of Science, 1-3 Kagurazaka, Shinjuku-ku, Tokyo 162-8601, Japan
| | - Ke-Hsuan Wang
- Department of Industrial Chemistry, Tokyo University of Science, 1-3 Kagurazaka, Shinjuku-ku, Tokyo 162-8601, Japan
| | - Takeshi Kawai
- Department of Industrial Chemistry, Tokyo University of Science, 1-3 Kagurazaka, Shinjuku-ku, Tokyo 162-8601, Japan
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Bai S, Wang LF, Wu ZW, Feng T, Han YF. Supramolecular-controlled regioselective photochemical [4+4] cycloaddition within Cp*Rh-based metallarectangles. Dalton Trans 2022; 51:8743-8748. [DOI: 10.1039/d2dt01094a] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Photochemical reactions are vital synthetic means for the synthesis of natural products as well as highly strained molecules. However, it remains an inherent challenge to control the chemo- and regioselectivity...
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Scalabre A, Okazaki Y, Kuppan B, Buffeteau T, Caroleo F, Magna G, Monti D, Paolesse R, Stefanelli M, Nlate S, Pouget E, Ihara H, Bassani DM, Oda R. Chirality induction to achiral molecules by silica-coated chiral molecular assemblies. Chirality 2021; 33:494-505. [PMID: 34296461 DOI: 10.1002/chir.23339] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2021] [Revised: 06/22/2021] [Accepted: 07/02/2021] [Indexed: 01/04/2023]
Abstract
Hybrid silica-organic nanohelices are used to organize a large variety of nonchiral small organic molecules or inorganic anions to nanometer-sized assemblies. Such chiral organization of achiral molecules induces chiroptical properties as detected by vibrational or electronic circular dichroism (CD), as well as from circularly polarized luminescence (CPL).
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Affiliation(s)
- Antoine Scalabre
- Institute of Chemistry & Biology of Membrane & Nanoobjects (UMR 5248 CBMN), CNRS - Université de Bordeaux - Bordeaux INP, Pessac, France
| | - Yutaka Okazaki
- Graduate School of Energy Science, Kyoto University, Kyoto, Japan
| | - Balamurugan Kuppan
- Institute of Chemistry & Biology of Membrane & Nanoobjects (UMR 5248 CBMN), CNRS - Université de Bordeaux - Bordeaux INP, Pessac, France
| | - Thierry Buffeteau
- Institut des Sciences Moléculaires (UMR5255 ISM), CNRS - Université de Bordeaux, Talence, France
| | - Fabrizio Caroleo
- Dept. of Chemical Science and Technologies, University of Rome Tor Vergata, Rome, Italy
| | - Gabriele Magna
- Dept. of Chemical Science and Technologies, University of Rome Tor Vergata, Rome, Italy
| | - Donato Monti
- Dept. of Chemical Science and Technologies, University of Rome Tor Vergata, Rome, Italy
| | - Roberto Paolesse
- Dept. of Chemical Science and Technologies, University of Rome Tor Vergata, Rome, Italy
| | - Manuela Stefanelli
- Dept. of Chemical Science and Technologies, University of Rome Tor Vergata, Rome, Italy
| | - Sylvain Nlate
- Institute of Chemistry & Biology of Membrane & Nanoobjects (UMR 5248 CBMN), CNRS - Université de Bordeaux - Bordeaux INP, Pessac, France
| | - Emilie Pouget
- Institute of Chemistry & Biology of Membrane & Nanoobjects (UMR 5248 CBMN), CNRS - Université de Bordeaux - Bordeaux INP, Pessac, France
| | - Hirotaka Ihara
- Department of Applied Chemistry and Biochemistry, Kumamoto University, Kumamoto, Japan
| | - Dario M Bassani
- Institut des Sciences Moléculaires (UMR5255 ISM), CNRS - Université de Bordeaux, Talence, France
| | - Reiko Oda
- Institute of Chemistry & Biology of Membrane & Nanoobjects (UMR 5248 CBMN), CNRS - Université de Bordeaux - Bordeaux INP, Pessac, France
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Harada T, Yanagita H, Ryu N, Okazaki Y, Kuwahara Y, Takafuji M, Nagaoka S, Ihara H, Oda R. Lanthanide ion-doped silica nanohelix: a helical inorganic network acts as a chiral source for metal ions. Chem Commun (Camb) 2021; 57:4392-4395. [PMID: 33949478 DOI: 10.1039/d1cc01112j] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
Abstract
We demonstrate that lanthanide ions doped in nanometrical silica helices with a chirally arranged siloxane network without any organic mediates show induced chiroptical properties such as circular dichroism and circularly polarized luminescence.
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Affiliation(s)
- Tomoyuki Harada
- Department of Applied Chemistry and Biochemistry, Kumamoto University, 2-39-1 Kurokami, Chuo-ku Kumamoto 860-8555, Japan.
| | - Hiroshi Yanagita
- Department of Applied Chemistry and Biochemistry, Kumamoto University, 2-39-1 Kurokami, Chuo-ku Kumamoto 860-8555, Japan.
| | - Naoya Ryu
- Materials Development Department, Kumamoto Industrial Research Institute, 3-11-38 Higashimachi, Higashi-ku, Kumamoto 862-0901, Japan.
| | - Yutaka Okazaki
- International Research and Education Centre of Advanced Energy Science, Graduate School of Energy Science, Kyoto University, Yoshida-Honmachi, Sakyo-ku Kyoto 606-8501, Japan
| | - Yutaka Kuwahara
- Department of Applied Chemistry and Biochemistry, Kumamoto University, 2-39-1 Kurokami, Chuo-ku Kumamoto 860-8555, Japan.
| | - Makoto Takafuji
- Department of Applied Chemistry and Biochemistry, Kumamoto University, 2-39-1 Kurokami, Chuo-ku Kumamoto 860-8555, Japan.
| | - Shoji Nagaoka
- Department of Applied Chemistry and Biochemistry, Kumamoto University, 2-39-1 Kurokami, Chuo-ku Kumamoto 860-8555, Japan. and Materials Development Department, Kumamoto Industrial Research Institute, 3-11-38 Higashimachi, Higashi-ku, Kumamoto 862-0901, Japan.
| | - Hirotaka Ihara
- Department of Applied Chemistry and Biochemistry, Kumamoto University, 2-39-1 Kurokami, Chuo-ku Kumamoto 860-8555, Japan.
| | - Reiko Oda
- Institut de Chimie & Biologie des Membranes & des Nano-objets (UMR5248 CBMN), CNRS, Université de Bordeaux, Institut Polytechnique Bordeaux 2 rue Robert Escarpit, Pessac 33607, France.
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Rao M, Wu W, Yang C. Recent progress on the enantioselective excited-state photoreactions by pre-arrangement of photosubstrate(s). GREEN SYNTHESIS AND CATALYSIS 2021. [DOI: 10.1016/j.gresc.2021.03.005] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022] Open
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