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Frederiks NC, Johnson CJ. Photochemical Mechanisms in Atmospherically Relevant Iodine Oxide Clusters. J Phys Chem Lett 2024; 15:6306-6314. [PMID: 38856106 DOI: 10.1021/acs.jpclett.4c01324] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/11/2024]
Abstract
Atmospheric new particle formation events can be driven by iodine oxides or oxoacids via both neutral and ionic mechanisms. Photolysis of new particles likely plays a significant role in their growth mechanisms, but their spectra and photolysis mechanisms remain difficult to characterize. We recorded ultraviolet (UV) photodissociation spectra of (I2O5)0-3(IO3-) clusters, observing loss of an O atom, I2O4, and (I2O5)1,2 in the atmospherically relevant range of 300-340 nm. With increasing cluster size, the intensity of absorption red shifts and generally increases, suggesting particles photolyze more frequently as they grow. Estimates of the rates indicate that even relatively small clusters are likely to undergo photolysis under high-UV conditions. Vibrational spectra identify the covalent moiety I3O8- as the likely chromophore, not IO3-. The I2O5 loss pathway competes with particle growth, while the slower O loss pathway likely produces 3O + 3(cluster) products that could drive subsequent intraparticle chemistry, particularly with co-adsorbed organic or amine species.
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Affiliation(s)
- Nicoline C Frederiks
- Department of Chemistry, Stony Brook University, 100 Nicolls Road, Stony Brook, New York 11794, United States
| | - Christopher J Johnson
- Department of Chemistry, Stony Brook University, 100 Nicolls Road, Stony Brook, New York 11794, United States
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2
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Prophet AM, Polley K, Van Berkel GJ, Limmer DT, Wilson KR. Iodide oxidation by ozone at the surface of aqueous microdroplets. Chem Sci 2024; 15:736-756. [PMID: 38179528 PMCID: PMC10762724 DOI: 10.1039/d3sc04254e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2023] [Accepted: 12/03/2023] [Indexed: 01/06/2024] Open
Abstract
The oxidation of iodide by ozone occurs at the sea-surface and within sea spray aerosol, influencing the overall ozone budget in the marine boundary layer and leading to the emission of reactive halogen gases. A detailed account of the surface mechanism has proven elusive, however, due to the difficulty in quantifying multiphase kinetics. To obtain a clearer understanding of this reaction mechanism at the air-water interface, we report pH-dependent oxidation kinetics of I- in single levitated microdroplets as a function of [O3] using a quadrupole electrodynamic trap and an open port sampling interface for mass spectrometry. A kinetic model, constrained by molecular simulations of O3 dynamics at the air-water interface, is used to understand the coupled diffusive, reactive, and evaporative pathways at the microdroplet surface, which exhibit a strong dependence on bulk solution pH. Under acidic conditions, the surface reaction is limited by O3 diffusion in the gas phase, whereas under basic conditions the reaction becomes rate limited on the surface. The pH dependence also suggests the existence of a reactive intermediate IOOO- as has previously been observed in the Br- + O3 reaction. Expressions for steady-state surface concentrations of reactants are derived and utilized to directly compute uptake coefficients for this system, allowing for an exploration of uptake dependence on reactant concentration. In the present experiments, reactive uptake coefficients of O3 scale weakly with bulk solution pH, increasing from 4 × 10-4 to 2 × 10-3 with decreasing solution pH from pH 13 to pH 3.
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Affiliation(s)
- Alexander M Prophet
- Chemical Sciences Division, Lawrence Berkeley National Laboratory Berkeley CA 94720 USA
- Department of Chemistry, University of California Berkeley CA 94720 USA
| | - Kritanjan Polley
- Chemical Sciences Division, Lawrence Berkeley National Laboratory Berkeley CA 94720 USA
- Department of Chemistry, University of California Berkeley CA 94720 USA
| | | | - David T Limmer
- Chemical Sciences Division, Lawrence Berkeley National Laboratory Berkeley CA 94720 USA
- Department of Chemistry, University of California Berkeley CA 94720 USA
- Materials Science Division, Lawrence Berkeley National Laboratory Berkeley California 94720 USA
- Kavli Energy NanoScience Institute Berkeley California 94720 USA
| | - Kevin R Wilson
- Chemical Sciences Division, Lawrence Berkeley National Laboratory Berkeley CA 94720 USA
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Parker K, Bollis NE, Ryzhov V. Ion-molecule reactions of mass-selected ions. MASS SPECTROMETRY REVIEWS 2024; 43:47-89. [PMID: 36447431 DOI: 10.1002/mas.21819] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
Abstract
Gas-phase reactions of mass-selected ions with neutrals covers a very broad area of fundamental and applied mass spectrometry (MS). Oftentimes, ion-molecule reactions (IMR) can serve as a viable alternative to collision-induced dissociation and other ion dissociation techniques when using tandem MS. This review focuses on the literature pertaining applications of IMR since 2013. During the past decade considerable efforts have been made in analytical applications of IMR, including advances in one of the major techniques for characterization of unsaturated fatty acids and lipids, ozone-induced dissociation, and the development of a new technique for sequencing of large ions, hydrogen atom attachment/abstraction dissociation. Many advances have also been made in identifying gas-phase chemistry specific to a functional group in organic and biological compounds, which are useful in structure elucidation of analytes and differentiation of isomers/isobars. With "soft" ionization techniques like electrospray ionization having become mainstream for quite some time now, the efforts in the area of metal ion catalysis have firmly moved into exploring chemistry of ligated metal complexes in their "natural" oxidation states allowing to model individual steps of mechanisms in homogeneous catalysis, especially in combination with high-level DFT calculations. Finally, IMR continue to contribute to the body of knowledge in the area of chemistry of interstellar processes.
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Affiliation(s)
- Kevin Parker
- Department of Chemistry and Biochemistry, Northern Illinois University, DeKalb, Illinois, USA
| | - Nicholas E Bollis
- Department of Chemistry and Biochemistry, Northern Illinois University, DeKalb, Illinois, USA
| | - Victor Ryzhov
- Department of Chemistry and Biochemistry, Northern Illinois University, DeKalb, Illinois, USA
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Fupeng Z, Junxi L, Bomiao Q, Mengmeng L, Shaofeng P, Yanbin W, Qiong S. A comparable DFT study on reaction of CHCl •- with O 3 and S 2O. J Mol Model 2023; 29:85. [PMID: 36867312 DOI: 10.1007/s00894-023-05483-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/27/2022] [Accepted: 02/21/2023] [Indexed: 03/04/2023]
Abstract
CONTEXT In this discussion, we began building two model, S2O + CHCl•- and O3 + CHCl•-, using DFT-BHandHLYP method, to study their reactions mechanisms on singlet PES. For this purpose, we hope to explore the effects of the difference between sulfur and oxygen atoms on the CHCl•- anion. Experimentalists and computer scientists may utilize the collected data to generate a wide range of hypotheses for experimental phenomena and predictions, allowing them to realize their full potential. METHODS The ion-molecule reaction mechanism of CHCl•- with S2O and O3 was studied using the DFT-BHandHLYP level of theory with the aug-cc-pVDZ basis set. Our theoretical findings show that Path 6 is the favored reaction pathway for CHCl•- + O3 reaction as identified by the O-abstraction reaction pattern. Comparing to the direct H- and Cl-abstraction mechanisms, the reaction (CHCl•- + S2O) prefers the intramolecular SN2 reaction pattern. Moreover, the calculated results demonstrated that the CHCl•- + S2O reaction is thermodynamically more favorable than the CHCl•- + O3 reaction, which is kinetically more advantageous. As a result, if the required reaction condition in the atmospheric process is met, the O3 reaction will happen more effectively. In terms of kinetics and thermodynamics viewpoints, the CHCl•- anion was very effective in eliminating S2O and O3.
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Affiliation(s)
- Zhang Fupeng
- Key Laboratory of Environment-Friendly Composite Materials of the State Ethnic Affairs Commission, Key Laboratory for Utility of Environment-Friendly Composite Materials and Biomass in University of Gansu Province, College of Chemical Engineering, Gansu Provincial Biomass Function Composites Engineering Research Center, Northwest Minzu University, Gansu, 730030, Lanzhou, China
| | - Liang Junxi
- Key Laboratory of Environment-Friendly Composite Materials of the State Ethnic Affairs Commission, Key Laboratory for Utility of Environment-Friendly Composite Materials and Biomass in University of Gansu Province, College of Chemical Engineering, Gansu Provincial Biomass Function Composites Engineering Research Center, Northwest Minzu University, Gansu, 730030, Lanzhou, China.
| | - Qi Bomiao
- Key Laboratory of Environment-Friendly Composite Materials of the State Ethnic Affairs Commission, Key Laboratory for Utility of Environment-Friendly Composite Materials and Biomass in University of Gansu Province, College of Chemical Engineering, Gansu Provincial Biomass Function Composites Engineering Research Center, Northwest Minzu University, Gansu, 730030, Lanzhou, China
| | - Lu Mengmeng
- Key Laboratory of Environment-Friendly Composite Materials of the State Ethnic Affairs Commission, Key Laboratory for Utility of Environment-Friendly Composite Materials and Biomass in University of Gansu Province, College of Chemical Engineering, Gansu Provincial Biomass Function Composites Engineering Research Center, Northwest Minzu University, Gansu, 730030, Lanzhou, China
| | - Pang Shaofeng
- Key Laboratory of Environment-Friendly Composite Materials of the State Ethnic Affairs Commission, Key Laboratory for Utility of Environment-Friendly Composite Materials and Biomass in University of Gansu Province, College of Chemical Engineering, Gansu Provincial Biomass Function Composites Engineering Research Center, Northwest Minzu University, Gansu, 730030, Lanzhou, China
| | - Wang Yanbin
- Key Laboratory of Environment-Friendly Composite Materials of the State Ethnic Affairs Commission, Key Laboratory for Utility of Environment-Friendly Composite Materials and Biomass in University of Gansu Province, College of Chemical Engineering, Gansu Provincial Biomass Function Composites Engineering Research Center, Northwest Minzu University, Gansu, 730030, Lanzhou, China
| | - Su Qiong
- Key Laboratory of Environment-Friendly Composite Materials of the State Ethnic Affairs Commission, Key Laboratory for Utility of Environment-Friendly Composite Materials and Biomass in University of Gansu Province, College of Chemical Engineering, Gansu Provincial Biomass Function Composites Engineering Research Center, Northwest Minzu University, Gansu, 730030, Lanzhou, China.
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Poad BLJ, Young RSE, Marshall DL, Trevitt AJ, Blanksby SJ. Accelerating Ozonolysis Reactions Using Supplemental RF-Activation of Ions in a Linear Ion Trap Mass Spectrometer. Anal Chem 2022; 94:3897-3903. [PMID: 35201768 DOI: 10.1021/acs.analchem.1c04915] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Gas-phase ion-molecule reactions provide structural insights across a range of analytical applications. A hindrance to the wider use of ion-molecule reactions is that they are relatively slow compared to other ion activation modalities and can thereby impose a bottleneck on the time required to analyze each sample. Here we describe a method for accelerating the rate of ion-molecule reactions involving ozone, implemented by supplementary RF-activation of mass-selected ions within a linear ion trap. Reaction rate accelerations between 15-fold (for ozonolysis of alkenes in ionised lipids) and 90-fold (for ozonation of halide anions) are observed compared to thermal conditions. These enhanced reaction rates with ozone increase sample throughput, aligning the reaction time with the overall duty cycle of the mass spectrometer. We demonstrate that the acceleration is due to the supplementary RF-activation surmounting the activation barrier energy of the entrance channel of the ion-molecule reaction. This rate acceleration is subsequently shown to aid identification of new, low abundance lipid isomers and enables an equivalent increase in the number of lipid species that can be analyzed.
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Affiliation(s)
- Berwyck L J Poad
- School of Chemistry and Physics, Queensland University of Technology, Brisbane, Queensland 4001, Australia.,Central Analytical Research Facility, Queensland University of Technology, Brisbane, Queensland 4001, Australia
| | - Reuben S E Young
- School of Chemistry and Physics, Queensland University of Technology, Brisbane, Queensland 4001, Australia
| | - David L Marshall
- Central Analytical Research Facility, Queensland University of Technology, Brisbane, Queensland 4001, Australia
| | - Adam J Trevitt
- School of Chemistry and Molecular Bioscience, University of Wollongong, Wollongong, New South Wales 2552, Australia
| | - Stephen J Blanksby
- School of Chemistry and Physics, Queensland University of Technology, Brisbane, Queensland 4001, Australia.,Central Analytical Research Facility, Queensland University of Technology, Brisbane, Queensland 4001, Australia
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McKinnon BI, Marlton SJP, Ucur B, Bieske EJ, Poad BLJ, Blanksby SJ, Trevitt AJ. Actinic Wavelength Action Spectroscopy of the IO - Reaction Intermediate. J Phys Chem Lett 2021; 12:11939-11944. [PMID: 34878800 DOI: 10.1021/acs.jpclett.1c03456] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
Iodinate anions are important in the chemistry of the atmosphere where they are implicated in ozone depletion and particle formation. The atmospheric chemistry of iodine is a complex overlay of neutral-neutral, ion-neutral, and photochemical processes, where many of the reactions and intermediates remain poorly characterized. This study targets the visible spectroscopy and photostability of the gas-phase hypoiodite anion (IO-), the initial product of the I- + O3 reaction, by mass spectrometry equipped with resonance-enhanced photodissociation and total ion-loss action spectroscopies. It is shown that IO- undergoes photodissociation to I- + O (3P) over 637-459 nm (15700-21800 cm-1) because of excitation to the bound first singlet excited state. Electron photodetachment competes with photodissociation above the electron detachment threshold of IO- at 521 nm (19200 cm-1) with peaks corresponding to resonant autodetachment involving the singlet excited state and the ground state of neutral IO possibly mediated by a dipole-bound state.
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Affiliation(s)
- Benjamin I McKinnon
- Molecular Horizons and School of Chemistry and Molecular Bioscience, University of Wollongong, Wollongong, New South Wales 2522, Australia
| | - Samuel J P Marlton
- Molecular Horizons and School of Chemistry and Molecular Bioscience, University of Wollongong, Wollongong, New South Wales 2522, Australia
| | - Boris Ucur
- Molecular Horizons and School of Chemistry and Molecular Bioscience, University of Wollongong, Wollongong, New South Wales 2522, Australia
| | - Evan J Bieske
- School of Chemistry, The University of Melbourne, Victoria 3010, Australia
| | - Berwyck L J Poad
- Central Analytical Research Facility, Queensland University of Technology, Brisbane 4001, Australia
- School of Chemistry and Physics, Queensland University of Technology, Brisbane 4001, Australia
| | - Stephen J Blanksby
- Central Analytical Research Facility, Queensland University of Technology, Brisbane 4001, Australia
- School of Chemistry and Physics, Queensland University of Technology, Brisbane 4001, Australia
| | - Adam J Trevitt
- Molecular Horizons and School of Chemistry and Molecular Bioscience, University of Wollongong, Wollongong, New South Wales 2522, Australia
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