Stacking of nanorings to generate nanotubes for acceleration of protein refolding

Crystal Engineering and Self-Assembled Nanoring Formation with Purine-CdII /HgII Supramolecular Frameworks

We report three complexes of CdII and HgII with two purine rare tautomers, N9-(pyridin-2-ylmethyl)-N6 -methoxyadenine, L1 and N7-(pyridin-2-ylmethyl)-N6 -methoxyadenine, L2, highlighting diverse crystallographic signatures exhibited by them. Influence of substituents, binding sites, steric effects and metal salts on the different modes of binding enabled an insight into metal-nucleobase interactions. L1 interacted with two and three equivalents of Cd(NO3 )2 .4H2 O and HgCl2 , respectively, while L2 interacted with two equivalents of HgCl2 , altogether leading to three different complexes (1 [C48 H48 Cd6 N34 O50 ], 2 [C12 H12 Cl4 Hg2 N6 O] and 3 [C12 H12 Cl2 HgN6 O]) possessing varied dimensionality and stabilising interactions. The photoluminescent properties of these coordination frameworks have also been probed. Notably, nanoring-like structures were obtained, as a result of self-assembly of 3 when investigated by transmission electron microscopy, additionally supported by molecular dynamics simulations.

Amplification of Molecular Asymmetry during the Hierarchical Self-Assembly of Foldable Azobenzene Dyads into Nanotoroids and Nanotubes

The amplification of molecular asymmetry through self-assembly is a phenomenon that not only comprehends the origin of homochirality in nature but also produces chiroptically active functional materials from molecules with minimal enantiomeric purity. Understanding how molecular asymmetry can be transferred and amplified into higher-order structures in a hierarchical self-assembly system is important but still unexplored. Herein, we present an intriguing example of the amplification of molecular asymmetry in hierarchically self-assembled nanotubes that feature discrete and isolatable toroidal intermediates. The hierarchical self-assembly is initiated via asymmetric intramolecular folding of scissor-shaped azobenzene dyads furnished with chiral side chains. When scalemic mixtures of the enantiomers are dissolved in a non-polar solvent and cooled to 20 °C, single-handed nanotoroids are formed, as confirmed using atomic force microscopy and circular dichroism analyses. A strong majority-rules effect at the nanotoroid level is observed and can be explained by a low mismatch penalty and a high helix-reversal penalty. The single-handed nanotoroids stack upon cooling to 0 °C to exclusively afford their respective single-handed nanotubes. Thus, the same degree of amplification of molecular asymmetry is realized at the nanotube level. The internal packing efficiency of molecules within nanotubes prepared from the pure enantiomers or their scalemic mixtures is likely different, as suggested by the absence of higher-order structure (supercoil) formation in the latter. X-ray diffraction analysis of the anisotropically oriented nanotube films revealed looser molecular packing within the scalemic nanotubes, which clearly reflects the lower enantiomeric purity of their internal chiral side chains.

Photo-responsive hole formation in the monolayer membrane wall of a supramolecular nanotube for quick recovery of encapsulated protein

Nanotubes with a single monolayer membrane wall comprised of a synthetic glycolipid and one of two synthetic azobenzene derivatives were assembled. X-ray diffraction, infrared, UV-visible, and circular dichroism spectroscopy clarified the embedding style of the azobenzene derivatives in the membrane wall, revealing that, depending on their different intermolecular hydrogen bond strengths, one azobenzene derivative was individually dispersed whereas the other formed a J-type aggregate. The non-aggregated derivative was insensitive to UV irradiation due to tight fixation by the surrounding glycolipid. In contrast, the aggregated derivative was sensitive to UV irradiation, which induced trans-to-cis isomerization of the derivative and disassembly of the J-type aggregate. Subsequent dissociation of the derivative into the bulk solution resulted in the formation of many nanometer-scale holes in the membrane wall. Although a model protein encapsulated within the nanotubes was slowly released over time from the two open ends of the nanotubes without UV irradiation, exposure to UV irradiation resulted in faster, preferential release of the protein through the holes in the membrane wall. The present findings are expected to facilitate the development not only of efficient means of recovering guest compounds stored within nanotubes but also the development of novel stimuli-responsive capsules in biological and medical fields.

Stimuli-Responsive Transformable Supramolecular Nanotubes

Supramolecular nanotubes produced by self-assembly of organic molecules can have unique structural features such as a one-dimensional morphology with no branching, distinguishable inner and outer surfaces and membrane walls, or a structure that is hollow and has a high aspect ratio. Incorporation of functional groups that respond to external chemical or physical stimuli into the constituent organic molecules of supramolecular nanotubes allows us to drastically change the structure of the nanotubes by applying such stimuli. This ability affords an array of controllable approaches for the encapsulation, storage, and release of guest compounds, which is expected to be useful in the fields of physics, chemistry, biology, and medicine. In this article, I review the supramolecular nanotubes developed by our group that exhibit morphological transformations in response to pH, chemical reaction, light, temperature, or moisture.

Scissor-Shaped Photochromic Dyads: Hierarchical Self-Assembly and Photoresponsive Property

Unique relationships between hierarchically organized biological nanostructures and functions have motivated chemists to construct sophisticated artificial nanostructured systems from small and simple synthetic molecules through self-assembly. As one of such sophisticated systems, we have investigated scissor-shaped photochromic dyads that can hierarchically self-assemble into discrete nanostructures showing photoresponsive properties. We synthesized various azobenzene dyads and found that these dyads adopt intramolecularly folded conformation like a closed scissor, and then self-assemble into toroidal nanostructures by generating curvature. The toroids further organize into nanotubes and further into helical supramolecular fibers depending on the nature of alkyl substituents. All of these nanostructures can be dissociated and reorganized through the photoisomerization of azobenzene units. On the other hand, the introduction of stilbene chromophores instead of azobenzenes leads to one-dimensional supramolecular polymerization, which upon the intramolecular photocyclization of stilbene chromophores shifts to curved self-assembly leading to helicoidal fibers with distinct supramolecular chirality.