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Chhabra A, Reich S, Shannon TM, Maleczka RE, Smith MR. Access to C(sp 3) borylated and silylated cyclic molecules: hydrogenation of corresponding arenes and heteroarenes. RSC Adv 2024; 14:10590-10607. [PMID: 38567346 PMCID: PMC10985595 DOI: 10.1039/d4ra00491d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2024] [Accepted: 03/15/2024] [Indexed: 04/04/2024] Open
Abstract
This paper presents a simple and cost-effective hydrogenation method for synthesizing a myriad of cycloalkanes and saturated heterocycles bearing boryl or silyl substituents. The catalyst used are heterogeneous, readily available, bench stable, and recyclable. Also demonstrated is the application of the method to compounds that possess both boryl and silyl groups. When combined with Ir-catalyzed sp2 C-H borylation, such hydrogenations offer a two-step complementary alternative to direct sp3 C-H borylations that can suffer selectivity and reactivity issues. Of practical value to the community, complete stereochemical analyses of reported borylated compounds that were never fully characterized are reported herein.
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Affiliation(s)
- Arzoo Chhabra
- Department of Chemistry, Michigan State University 578 S Shaw Lane East Lansing Michigan 48824 USA
| | - Sabrina Reich
- Department of Chemistry, Michigan State University 578 S Shaw Lane East Lansing Michigan 48824 USA
| | - Timothy M Shannon
- Department of Chemistry, Michigan State University 578 S Shaw Lane East Lansing Michigan 48824 USA
| | - Robert E Maleczka
- Department of Chemistry, Michigan State University 578 S Shaw Lane East Lansing Michigan 48824 USA
| | - Milton R Smith
- Department of Chemistry, Michigan State University 578 S Shaw Lane East Lansing Michigan 48824 USA
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Halder P, Iqubal A, Mondal K, Mukhopadhyay N, Das P. Carbonylative Transformations Using a DMAP-Based Pd-Catalyst through Ex Situ CO Generation. J Org Chem 2023; 88:15218-15236. [PMID: 37874889 DOI: 10.1021/acs.joc.3c01725] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2023]
Abstract
A phosphine-free, efficient protocol for aminocarbonylation and carbonylative Suzuki-Miyaura coupling has been developed using a novel palladium complex, [PdII(DMAP)2(OAc)2]. The complex was successfully synthesized using a stoichiometric reaction between PdII(OAc)2 and DMAP in acetone at room temperature and characterized using single-crystal X-ray analysis. Only 5 mol % catalyst loading was sufficient for effective carbonylative transformations. "Chloroform-COware" chemistry was utilized for safe and facile insertion of the carbonyl unit using chloroform as an inexpensive CO source in a two-chamber setup. Various value-added pharmaceutically relevant compounds such as CX-516, CX-546, and farampator were synthesized using the technique. Furthermore, the commercially designed COware was engineered to COware-RB setup for sequential one-pot synthesis of indenoisoquinolines (topoisomerase I inhibitors).
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Affiliation(s)
- Pallabi Halder
- Department of Chemistry and Chemical Biology, Indian Institute of Technology (Indian School of Mines), Dhanbad 826004, India
| | - Ashif Iqubal
- Department of Chemistry and Chemical Biology, Indian Institute of Technology (Indian School of Mines), Dhanbad 826004, India
| | - Krishanu Mondal
- Department of Chemistry and Chemical Biology, Indian Institute of Technology (Indian School of Mines), Dhanbad 826004, India
| | - Narottam Mukhopadhyay
- Department of Chemistry and Chemical Biology, Indian Institute of Technology (Indian School of Mines), Dhanbad 826004, India
| | - Parthasarathi Das
- Department of Chemistry and Chemical Biology, Indian Institute of Technology (Indian School of Mines), Dhanbad 826004, India
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Optimization of triazolo[4,5-d]pyrimidines towards human CC chemokine receptor 7 (CCR7) antagonists. Eur J Med Chem 2023; 251:115240. [PMID: 36924670 DOI: 10.1016/j.ejmech.2023.115240] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2022] [Revised: 02/22/2023] [Accepted: 02/24/2023] [Indexed: 03/07/2023]
Abstract
CCR7 signaling directs the migration of both immune cells and cancer cells to the lymph nodes, is involved in numerous chronic inflammatory disorders and lymph node metastases. Despite the therapeutic promise of CCR7 antagonists, no potent and selective small molecule CCR7 antagonists have been reported to date. Since most human chemokine G protein-coupled receptors (GPCRs) share a conserved intracellular allosteric binding site, new CCR7 antagonist chemotypes may be identified by screening small molecules that are known to target this site in other chemokine GPCRs. In this work, our previously prepared series of 14 scaffold-modified analogues of a known thiazolo[4,5-d]pyrimidine CXCR2 antagonist were screened as potential CCR7 antagonists. This resulted in the discovery of a triazolo[4,5-d]pyrimidine analogue with an IC50 of 2.43 μM against CCR7 and 0.66 μM against CXCR2. Exploration of the structure-activity relationship (SAR) for the 3-, 5- and 7-position substituents of this triazolo[4,5-d]pyrimidine resulted in improved potency and selectivity, with an IC50 of 0.43 μM and 11.02 μM against CCR7 and CXCR2, respectively, for the most selective derivative. Molecular docking showed that the binding mode of these triazolo[4,5-d]pyrimidines in CCR7 and CXCR2 corresponds with those of previously co-crystallized ligands.
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Haji Abbasi Somehsaraie M, Fathi Vavsari V, Kamangar M, Balalaie S. Chemical Wastes in the Peptide Synthesis Process and Ways to Reduce Them. IRANIAN JOURNAL OF PHARMACEUTICAL RESEARCH : IJPR 2022; 21:e123879. [PMID: 36942077 PMCID: PMC10024322 DOI: 10.5812/ijpr-123879] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/06/2022] [Revised: 05/25/2022] [Accepted: 05/28/2022] [Indexed: 11/16/2022]
Abstract
In recent decades, a growing interest has been observed among pharmaceutical companies in producing and selling 80 FDA-approved therapeutic peptides. However, there are many drawbacks to peptide synthesis at the academic and industrial scales, involving the use of large amounts of highly hazardous coupling reagents and solvents. This review focuses on hideous and observant wastes produced before, during, and after peptide synthesis and proposes some solutions to reduce them.
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Affiliation(s)
| | - Vaezeh Fathi Vavsari
- Peptide Chemistry Research Institute, K. N. Toosi University of Technology, Tehran, Iran
| | - Mohammad Kamangar
- Peptide Chemistry Research Institute, K. N. Toosi University of Technology, Tehran, Iran
| | - Saeed Balalaie
- Peptide Chemistry Research Institute, K. N. Toosi University of Technology, Tehran, Iran
- Corresponding Author: Peptide Chemistry Research Institute, K. N. Toosi University of Technology, Tehran, Iran.
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A Brønsted Acidic Deep Eutectic Solvent for N-Boc Deprotection. Catalysts 2022. [DOI: 10.3390/catal12111480] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
Abstract
The tert-butyloxycarbonyl (Boc) group is one of the most widely used amine-protecting groups in multistep reactions in synthetic organic chemistry as well as in peptide synthesis. Traditional methods to remove the Boc group have disadvantages in terms of high acidity, the use of expensive reagents, excessive amounts of catalysts and harmful solvents as well as high temperatures, making them environmentally unsustainable. Therefore, more efforts must be stepwise tightened to make Boc removal practical, clean, and minimize any potential impact. We describe an efficient and sustainable method for N-Boc deprotection by means of a choline chloride/p-toluenesulfonic acid deep eutectic solvent (DES), which is used as a reaction medium plus catalyst. The adopted conditions allow the deprotection of a wide variety of N-Boc derivatives in excellent yields. The strategy has found advantages in greening, simplicity, and short reaction times, resulting in a useful alternative to standard methods.
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Halder P, Talukdar V, Iqubal A, Das P. Palladium-Catalyzed Aminocarbonylation of Isoquinolines Utilizing Chloroform-COware Chemistry. J Org Chem 2022; 87:13965-13979. [PMID: 36217780 DOI: 10.1021/acs.joc.2c01629] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Abstract
The carbonyl group forms an integral part of several drug molecules and materials; hence, synthesis of carbonylated compounds remains an intriguing area of research for synthetic and medicinal chemists. Handling toxic CO gas has several limitations; thus, using safe and effective techniques for in or ex situ generation of carbon monoxide from nontoxic and cheap precursors is highly desirable. Among several precursors that have been explored for the generation of CO gas, chloroform can prove to be a promising CO surrogate due to its cost-effectiveness and ready availability. However, the one-pot chloroform-based carbonylation reaction requires strong basic conditions for hydrolysis of chloroform that may affect functional group tolerability of substrates and scale-up reactions. These limitations can be overcome by a two-chamber reactor (COware) that can be utilized for ex situ CO generation through hydrolysis of chloroform in one chamber and facilitating safe carbonylation reactions in another chamber under mild conditions. The versatility of this "Chloroform-COware" technique is explored through palladium-catalyzed aminocarbonylation of medicinally relevant heterocyclic cores, viz., isoquinoline and quinoline.
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Affiliation(s)
- Pallabi Halder
- Department of Chemistry and Chemical Biology, Indian Institute of Technology (Indian School of Mines), Dhanbad-826004, India
| | - Vishal Talukdar
- Department of Chemistry and Chemical Biology, Indian Institute of Technology (Indian School of Mines), Dhanbad-826004, India
| | - Ashif Iqubal
- Department of Chemistry and Chemical Biology, Indian Institute of Technology (Indian School of Mines), Dhanbad-826004, India
| | - Parthasarathi Das
- Department of Chemistry and Chemical Biology, Indian Institute of Technology (Indian School of Mines), Dhanbad-826004, India
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Yeboue Y, Rguioueg N, Subra G, Martinez J, Lamaty F, Métro T. Gram‐Scale Synthesis of a Hexapeptide by Fragment Coupling in a Ball Mill. European J Org Chem 2022. [DOI: 10.1002/ejoc.202100839] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Yves Yeboue
- IBMM, Univ Montpellier CNRS ENSCM Montpellier France
| | | | - Gilles Subra
- IBMM, Univ Montpellier CNRS ENSCM Montpellier France
| | - Jean Martinez
- IBMM, Univ Montpellier CNRS ENSCM Montpellier France
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Rodygin KS, Lotsman KA, Erokhin KS, Korabelnikova VA, Ananikov VP. Thermal Mapping of Self-Promoted Calcium Carbide Reactions for Performing Energy-Economic Processes. Int J Mol Sci 2022; 23:ijms23052763. [PMID: 35269903 PMCID: PMC8911359 DOI: 10.3390/ijms23052763] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2022] [Revised: 02/22/2022] [Accepted: 02/24/2022] [Indexed: 12/04/2022] Open
Abstract
The syntheses of various chemical compounds require heating. The intrinsic release of heat in exothermic processes is a valuable heat source that is not effectively used in many reactions. In this work, we assessed the released heat during the hydrolysis of an energy-rich compound, calcium carbide, and explored the possibility of its usage. Temperature profiles of carbide hydrolysis were recorded, and it was found that the heat release depended on the cosolvent and water/solvent ratio. Thus, the release of heat can be controlled and adjusted. To monitor the released heat, a special tube-in-tube reactor was assembled using joining part 3D-printed with nylon. The thermal effect of the reaction was estimated using a thermoimaging IR monitor. It was found that the kinetics of heat release are different when using mixtures of water with different solvents, and the maximum achievable temperature depends on the type of solvent and the amount of water and carbide. The possibility of using the heat released during carbide hydrolysis to initiate a chemical reaction was tested using a hydrothiolation reaction—the nucleophilic addition of thiols to acetylene. In a model experiment, the yield of the desired product with the use of heat from carbide hydrolysis was 89%, compared to 30% in this intrinsic heating, which was neglected.
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Affiliation(s)
- Konstantin S. Rodygin
- Institute of Chemistry, Saint Petersburg State University, Universitetskiy pr. 26, 198504 Saint Petersburg, Russia; (K.S.R.); (K.A.L.)
| | - Kristina A. Lotsman
- Institute of Chemistry, Saint Petersburg State University, Universitetskiy pr. 26, 198504 Saint Petersburg, Russia; (K.S.R.); (K.A.L.)
| | - Kirill S. Erokhin
- Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Leninsky pr. 47, 119991 Moscow, Russia; (K.S.E.); (V.A.K.)
| | - Viktoria A. Korabelnikova
- Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Leninsky pr. 47, 119991 Moscow, Russia; (K.S.E.); (V.A.K.)
| | - Valentine P. Ananikov
- Institute of Chemistry, Saint Petersburg State University, Universitetskiy pr. 26, 198504 Saint Petersburg, Russia; (K.S.R.); (K.A.L.)
- Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Leninsky pr. 47, 119991 Moscow, Russia; (K.S.E.); (V.A.K.)
- Correspondence:
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Huang ZY, Li WS, Xu J, Xiang BR, Li MX, Chen LJ, Wang YS. Facile and Efficient N-Boc Deprotection of Amide and Sulfonamide under Microwave Irradiation in Water. HETEROCYCLES 2022. [DOI: 10.3987/com-22-14698] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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