1
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Xiao Y, Liu J, Jiang Y, Guo Y, Ye T. Total Syntheses and Stereochemical Assignment of Acremolides A and B. Molecules 2024; 29:3599. [PMID: 39125004 PMCID: PMC11314444 DOI: 10.3390/molecules29153599] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2024] [Revised: 07/24/2024] [Accepted: 07/26/2024] [Indexed: 08/12/2024] Open
Abstract
The absolute stereochemical configurations of acremolides A and B were predicted by a biochemistry-based rule and unambiguously confirmed through their total syntheses. The features of the total syntheses include sequential Krische's Ir-catalyzed crotylation, Brown's borane-mediated crotylation, Mitsunobu esterification reaction, and cross-metathesis reaction. The efficient total synthesis enabled clear validation of the predicted stereochemistry for acremolides A and B.
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Affiliation(s)
- Yi Xiao
- State Key Laboratory of Chemical Oncogenomics, Peking University Shenzhen Graduate School, Shenzhen 518055, China; (Y.X.); (J.L.); (Y.J.)
| | - Junyang Liu
- State Key Laboratory of Chemical Oncogenomics, Peking University Shenzhen Graduate School, Shenzhen 518055, China; (Y.X.); (J.L.); (Y.J.)
- School of Pharmacy and Food Engineering, Wuyi University, Jiangmen 529020, China
| | - Yangyang Jiang
- State Key Laboratory of Chemical Oncogenomics, Peking University Shenzhen Graduate School, Shenzhen 518055, China; (Y.X.); (J.L.); (Y.J.)
| | - Yian Guo
- State Key Laboratory of Chemical Oncogenomics, Peking University Shenzhen Graduate School, Shenzhen 518055, China; (Y.X.); (J.L.); (Y.J.)
| | - Tao Ye
- State Key Laboratory of Chemical Oncogenomics, Peking University Shenzhen Graduate School, Shenzhen 518055, China; (Y.X.); (J.L.); (Y.J.)
- Qian Yan (Shenzhen) Pharmatech. Ltd., Shenzhen 518172, China
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2
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Hwang S, Choi M, Jeong M, Lee C. Synthesis of the C13-C27 Fragment of Madeirolide A Using Visible-Light-Promoted Radical Cyclization. Org Lett 2024; 26:1067-1072. [PMID: 38293710 DOI: 10.1021/acs.orglett.3c04305] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2024]
Abstract
The convergent synthesis of a fully elaborated C13-C27 fragment of madeirolide A has been achieved. The key features of the synthesis include the stereocontrolled construction of both the THF and THP rings via visible-light-induced iridium-catalyzed radical cyclization and the late-stage union of the two oxacyclic subunits through nickel-catalyzed decarboxylative cross-coupling.
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Affiliation(s)
- Sunghyun Hwang
- Department of Chemistry, Seoul National University, Seoul 08826, Republic of Korea
| | - Minchul Choi
- Department of Chemistry, Seoul National University, Seoul 08826, Republic of Korea
| | - Myungeun Jeong
- Department of Chemistry, Seoul National University, Seoul 08826, Republic of Korea
| | - Chulbom Lee
- Department of Chemistry, Seoul National University, Seoul 08826, Republic of Korea
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3
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Goda Y, Fuwa H. Total Synthesis of (-)-Enigmazole B. Org Lett 2023; 25:8402-8407. [PMID: 37796572 DOI: 10.1021/acs.orglett.3c03002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/06/2023]
Abstract
Total synthesis of (-)-enigmazole B was achieved for the first time. Highlights of the present synthesis include an olefin cross-metathesis and hemiacetalization/intramolecular oxa-Michael addition sequence for accessing an (E)-configured enol tosylate, a Sonogashira cross-coupling to assemble all the carbon atoms of the target natural product, a remarkably chemo- and regioselective Au-catalyzed intramolecular alkyne hydroalkoxylation for the construction of the dihydropyran ring, and a Yamaguchi macrolactonization to close the 18-membered macrolactone skeleton.
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Affiliation(s)
- Yoshihiro Goda
- Department of Applied Chemistry, Faculty of Science and Engineering, Chuo University, 1-13-27 Kasuga, Bunkyo-ku, Tokyo 112-8551, Japan
| | - Haruhiko Fuwa
- Department of Applied Chemistry, Faculty of Science and Engineering, Chuo University, 1-13-27 Kasuga, Bunkyo-ku, Tokyo 112-8551, Japan
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4
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Takamura H, Hattori K, Ohashi T, Otsu T, Kadota I. Relative stereochemical determination of the C61-C83 fragment of symbiodinolide using a stereodivergent synthetic approach. Org Biomol Chem 2023; 21:8837-8848. [PMID: 37791452 DOI: 10.1039/d3ob01420g] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/05/2023]
Abstract
Structural determination is required in the use of marine natural products to create novel drugs and drug leads in medicinal chemistry. Symbiodinolide, which is a polyol marine natural product with a molecular weight of 2860, increases the intracellular Ca2+ concentration and exhibits inhibitory activity against cyclooxygenase-1. Seventy percent of the structure of symbiodinolide has been stereochemically clarified. Herein, we report the elucidation of the relative configuration of the C61-C83 fragment, which is among the remaining thirty percent, using a stereodivergent synthetic strategy. We first assigned the relative configuration of the C61-C74 fragment. Two candidate diastereomers of the C61-C74 fragment were synthesized, and their NMR data were compared with those of the natural product, revealing the relative stereochemistry of this component. We then narrowed down the candidate compounds for the C69-C83 fragment from 16 possible diastereomers by analyzing the NMR data of the natural product, and we thus selected eight candidate diastereomers. Stereodivergent synthesis of the candidates for this fragment and comparison of the NMR data of the natural product and the eight synthetic products resulted in the relative stereostructural clarification of the C69-C83 fragment. These individually determined relative stereochemistries of the C61-C74 and C69-C83 fragments were connected via the common C69-C73 tetrahydropyran moiety of the fragments. Finally, the relative configuration of the C61-C83 fragment of symbiodinolide was determined. The stereodivergent synthetic approach used in this study can be extended to the stereochemical determination of other fragments of symbiodinolide.
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Affiliation(s)
- Hiroyoshi Takamura
- Department of Chemistry, Graduate School of Natural Science and Technology, Okayama University, 3-1-1 Tsushimanaka, Kita-ku, Okayama 700-8530, Japan.
| | - Kosuke Hattori
- Department of Chemistry, Graduate School of Natural Science and Technology, Okayama University, 3-1-1 Tsushimanaka, Kita-ku, Okayama 700-8530, Japan.
| | - Takumi Ohashi
- Department of Chemistry, Graduate School of Natural Science and Technology, Okayama University, 3-1-1 Tsushimanaka, Kita-ku, Okayama 700-8530, Japan.
| | - Taichi Otsu
- Department of Chemistry, Graduate School of Natural Science and Technology, Okayama University, 3-1-1 Tsushimanaka, Kita-ku, Okayama 700-8530, Japan.
| | - Isao Kadota
- Department of Chemistry, Graduate School of Natural Science and Technology, Okayama University, 3-1-1 Tsushimanaka, Kita-ku, Okayama 700-8530, Japan.
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5
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Liao X, Li S, Guo Y, Ye T. Total Synthesis of Nicrophorusamide A and Structural Disproof of the Proposed Noursamycin A. Molecules 2023; 28:7442. [PMID: 37959861 PMCID: PMC10647733 DOI: 10.3390/molecules28217442] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2023] [Revised: 10/29/2023] [Accepted: 11/02/2023] [Indexed: 11/15/2023] Open
Abstract
Total synthesis of the proposed noursamycin A has been accomplished, which disproves the original structural assignments. The synthetic strategy described herein has also been employed in the first total synthesis of nicrophorusamide A, a cyclopeptide that is structurally related to noursamycin A.
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Affiliation(s)
- Xiaoyun Liao
- State Key Laboratory of Chemical Oncogenomics, Peking University Shenzhen Graduate School, University Town, Xili, Shenzhen 518055, China; (X.L.); (Y.G.)
| | - Shupeng Li
- State Key Laboratory of Chemical Oncogenomics, Peking University Shenzhen Graduate School, University Town, Xili, Shenzhen 518055, China; (X.L.); (Y.G.)
| | - Yian Guo
- State Key Laboratory of Chemical Oncogenomics, Peking University Shenzhen Graduate School, University Town, Xili, Shenzhen 518055, China; (X.L.); (Y.G.)
- QianYan (Shenzhen) Pharmatech. Ltd., 5th Floor East, Building-3, Longcheng Industrial Park, Qinglin Roas West, Longgang District, Shenzhen 518172, China
| | - Tao Ye
- State Key Laboratory of Chemical Oncogenomics, Peking University Shenzhen Graduate School, University Town, Xili, Shenzhen 518055, China; (X.L.); (Y.G.)
- QianYan (Shenzhen) Pharmatech. Ltd., 5th Floor East, Building-3, Longcheng Industrial Park, Qinglin Roas West, Longgang District, Shenzhen 518172, China
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6
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The Tetrahydrofuran Motif in Marine Lipids and Terpenes. Mar Drugs 2022; 20:md20100642. [PMID: 36286465 PMCID: PMC9605582 DOI: 10.3390/md20100642] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/20/2022] [Revised: 10/09/2022] [Accepted: 10/12/2022] [Indexed: 11/06/2022] Open
Abstract
Heterocycles are particularly common moieties within marine natural products. Specifically, tetrahydrofuranyl rings are present in a variety of compounds which present complex structures and interesting biological activities. Focusing on terpenoids, a high number of tetrahydrofuran-containing metabolites have been isolated during the last decades. They show promising biological activities, making them potential leads for novel antibiotics, antikinetoplastid drugs, amoebicidal substances, or anticancer drugs. Thus, they have attracted the attention of the synthetics community and numerous approaches to their total syntheses have appeared. Here, we offer the reader an overview of marine-derived terpenoids and related compounds, their isolation, structure determination, and a special focus on their total syntheses and biological profiles.
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Mizukami D, Iio K, Oda M, Onodera Y, Fuwa H. Tandem Macrolactone Synthesis: Total Synthesis of (-)-Exiguolide by a Macrocyclization/Transannular Pyran Cyclization Strategy. Angew Chem Int Ed Engl 2022; 61:e202202549. [PMID: 35243740 DOI: 10.1002/anie.202202549] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2022] [Indexed: 12/25/2022]
Abstract
Tetrahydropyran-containing macrolactones were synthesized by integrating Meyer-Schuster rearrangement, macrocyclic ring-closing metathesis, and transannular oxa-Michael addition under gold and ruthenium catalysis. Single-step access to a variety of 14- to 20-membered macrolactones containing a tetrahydropyran ring was possible from readily available linear precursors in good yields and with moderate to excellent diastereoselectivity. A 13-step synthesis of (-)-exiguolide, an anticancer marine macrolide, showcased the feasibility of our tandem reaction sequence for macrolactone synthesis and also demonstrated the power of transannular reactions for rapid assembly of the tetrahydropyran rings of the target natural product.
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Affiliation(s)
- Daichi Mizukami
- Department of Applied Chemistry, Faculty of Science and Engineering, Chuo University, 1-13-27 Kasuga, Bunkyo-ku, Tokyo, 112-8551, Japan
| | - Kei Iio
- Department of Applied Chemistry, Faculty of Science and Engineering, Chuo University, 1-13-27 Kasuga, Bunkyo-ku, Tokyo, 112-8551, Japan
| | - Mami Oda
- Department of Applied Chemistry, Faculty of Science and Engineering, Chuo University, 1-13-27 Kasuga, Bunkyo-ku, Tokyo, 112-8551, Japan
| | - Yu Onodera
- Graduate School of Life Sciences, Tohoku University, 2-1-1 Katahira, Aoba-ku, Sendai, 981-8577, Japan
| | - Haruhiko Fuwa
- Department of Applied Chemistry, Faculty of Science and Engineering, Chuo University, 1-13-27 Kasuga, Bunkyo-ku, Tokyo, 112-8551, Japan
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8
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Mizukami D, Iio K, Oda M, Onodera Y, Fuwa H. Tandem Macrolactone Synthesis: Total Synthesis of (−)‐Exiguolide by a Macrocyclization/Transannular Pyran Cyclization Strategy. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202202549] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Daichi Mizukami
- Chuo University - Korakuen Campus: Chuo Daigaku - Korakuen Campus Department of Applied Chemistry JAPAN
| | - Kei Iio
- Chuo University - Korakuen Campus: Chuo Daigaku - Korakuen Campus Department of Applied Chemistry JAPAN
| | - Mami Oda
- Chuo University - Korakuen Campus: Chuo Daigaku - Korakuen Campus Department of Applied Chemistry JAPAN
| | - Yu Onodera
- Tohoku University - Katahira Campus: Tohoku Daigaku Graduate School of Life Sciences JAPAN
| | - Haruhiko Fuwa
- Chuo University Department of Applied Chemistry 1-13-27 KasugaBunkyo-ku 112-8551 Tokyo JAPAN
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9
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Fernández-Peña L, Díez-Poza C, González-Andrés P, Barbero A. The Tetrahydrofuran Motif in Polyketide Marine Drugs. Mar Drugs 2022; 20:120. [PMID: 35200649 PMCID: PMC8880653 DOI: 10.3390/md20020120] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/02/2022] [Revised: 01/20/2022] [Accepted: 02/01/2022] [Indexed: 11/17/2022] Open
Abstract
Oxygen heterocycles are units that are abundant in a great number of marine natural products. Among them, marine polyketides containing tetrahydrofuran rings have attracted great attention within the scientific community due to their challenging structures and promising biological activities. An overview of the most important marine tetrahydrofuran polyketides, with a focused discussion on their isolation, structure determination, approaches to their total synthesis, and biological studies is provided.
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Affiliation(s)
| | | | | | - Asunción Barbero
- Department of Organic Chemistry, Campus Miguel Delibes, University of Valladolid, 47011 Valladolid, Spain; (L.F.-P.); (C.D.-P.); (P.G.-A.)
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10
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Wang Y, Chintalapudi V, Gudmundsson HG, Challis GL, Anderson EA. Synthesis of the C50 diastereomers of the C33–C51 fragment of stambomycin D. Org Chem Front 2022. [DOI: 10.1039/d1qo01635k] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
The preparation of two C50 diastereomers of the C33–C51 region of stambomycin D is described. In addition to excellent correlation with the natural product, this synthesis establishes conditions for eventual global deprotection.
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Affiliation(s)
- Yongchen Wang
- Chemistry Research Laboratory, University of Oxford, 12 Mansfield Road, Oxford, OX1 3TA, UK
| | - Venkaiah Chintalapudi
- Chemistry Research Laboratory, University of Oxford, 12 Mansfield Road, Oxford, OX1 3TA, UK
| | | | - Gregory L. Challis
- Department of Chemistry and Warwick Integrative Synthetic Biology Centre, University of Warwick, Coventry, CV4 7AL, UK
- Department of Biochemistry and Molecular Biology and ARC Centre of Excellence for Innovations in Peptide and Protein Science, Biomedicine Discovery Institute, Monash University, Clayton, Victoria 3800, Australia
| | - Edward A. Anderson
- Chemistry Research Laboratory, University of Oxford, 12 Mansfield Road, Oxford, OX1 3TA, UK
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11
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Schmidt AC, Hiersemann M. Total Synthesis and Structural Assignment of (-)-Fusaequisin A. Chemistry 2021; 28:e202103558. [PMID: 34762322 PMCID: PMC9299783 DOI: 10.1002/chem.202103558] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2021] [Indexed: 11/09/2022]
Abstract
(-)-Fusaequisin A is an irregularly assembled polyketide isolated from the ascomycete Fusarium equiseti. Fusaequisin A shares a carbon backbone with curvicollide C from the ascomycete Podospora curvicolla but its absolute configuration remained hitherto unsettled. Herein, we document the total synthesis of (-)-fusaequisin A and its 4-O-desmethyl derivative following a central-to-lateral building block strategy. Catalytic asymmetric Claisen rearrangement, Julia-Kocienski olefination and olefin cross-metathesis served as key C/C-connecting transformations. The constitution and absolute configuration of (-)-fusaequisin A was deduced and the original structural assignment was adjusted.
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Affiliation(s)
- Ann-Christin Schmidt
- Fakultät für Chemie und Chemische Biologie, TU Dortmund, 44227, Dortmund, Germany
| | - Martin Hiersemann
- Fakultät für Chemie und Chemische Biologie, TU Dortmund, 44227, Dortmund, Germany
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12
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Lim J, Chintalapudi V, Gudmundsson HG, Tran M, Bernasconi A, Blanco A, Song L, Challis GL, Anderson EA. Synthesis of the C1-C27 Fragment of Stambomycin D Validates Modular Polyketide Synthase-Based Stereochemical Assignments. Org Lett 2021; 23:7439-7444. [PMID: 34494848 PMCID: PMC8491158 DOI: 10.1021/acs.orglett.1c02650] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Abstract
![]()
The
stambomycins
are a family of bioactive macrolides isolated
from Streptomyces ambofaciens. Aside from two stereocenters
installed through cytochrome P450 oxidations, their stereochemistry
has been predicted by sequence analysis of the polyketide synthase.
We report a synthesis of the C1–C27 fragment of stambomycin
D, the spectroscopic data of which correlates well with that of the
natural product, further validating predictive sequence analysis as
a powerful tool for stereochemical assignment of complex polyketide
natural products.
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Affiliation(s)
- Jieyan Lim
- Chemistry Research Laboratory, University of Oxford, 12 Mansfield Road, Oxford, OX1 3TA, U.K
| | - Venkaiah Chintalapudi
- Chemistry Research Laboratory, University of Oxford, 12 Mansfield Road, Oxford, OX1 3TA, U.K
| | - Haraldur G Gudmundsson
- Chemistry Research Laboratory, University of Oxford, 12 Mansfield Road, Oxford, OX1 3TA, U.K
| | - Minh Tran
- Chemistry Research Laboratory, University of Oxford, 12 Mansfield Road, Oxford, OX1 3TA, U.K
| | - Alice Bernasconi
- Sezione Chimica Generale e Organica "A. Marchesini", Università degli Studi di Milano, Via G. Venezian 21, 20133 Milano, Italy
| | - Araceli Blanco
- Departamento de Química Orgánica, Facultad de Ciencias Químicas, Universidad de Salamanca, 37008 Salamanca, Spain
| | - Lijiang Song
- Department of Chemistry and Warwick Integrative Synthetic Biology Centre, University of Warwick, Coventry, CV4 7AL, U.K
| | - Gregory L Challis
- Department of Chemistry and Warwick Integrative Synthetic Biology Centre, University of Warwick, Coventry, CV4 7AL, U.K.,Department of Biochemistry and Molecular Biology and ARC Centre of Excellence for Innovations in Peptide and Protein Science, Biomedicine Discovery Institute, Monash University, Clayton, Victoria 3800, Australia
| | - Edward A Anderson
- Chemistry Research Laboratory, University of Oxford, 12 Mansfield Road, Oxford, OX1 3TA, U.K
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