1
|
Dong H, Lin J, Tao Y, Jia Y, Sun L, Li WJ, Sun H. AI-enhanced biomedical micro/nanorobots in microfluidics. LAB ON A CHIP 2024; 24:1419-1440. [PMID: 38174821 DOI: 10.1039/d3lc00909b] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/05/2024]
Abstract
Human beings encompass sophisticated microcirculation and microenvironments, incorporating a broad spectrum of microfluidic systems that adopt fundamental roles in orchestrating physiological mechanisms. In vitro recapitulation of human microenvironments based on lab-on-a-chip technology represents a critical paradigm to better understand the intricate mechanisms. Moreover, the advent of micro/nanorobotics provides brand new perspectives and dynamic tools for elucidating the complex process in microfluidics. Currently, artificial intelligence (AI) has endowed micro/nanorobots (MNRs) with unprecedented benefits, such as material synthesis, optimal design, fabrication, and swarm behavior. Using advanced AI algorithms, the motion control, environment perception, and swarm intelligence of MNRs in microfluidics are significantly enhanced. This emerging interdisciplinary research trend holds great potential to propel biomedical research to the forefront and make valuable contributions to human health. Herein, we initially introduce the AI algorithms integral to the development of MNRs. We briefly revisit the components, designs, and fabrication techniques adopted by robots in microfluidics with an emphasis on the application of AI. Then, we review the latest research pertinent to AI-enhanced MNRs, focusing on their motion control, sensing abilities, and intricate collective behavior in microfluidics. Furthermore, we spotlight biomedical domains that are already witnessing or will undergo game-changing evolution based on AI-enhanced MNRs. Finally, we identify the current challenges that hinder the practical use of the pioneering interdisciplinary technology.
Collapse
Affiliation(s)
- Hui Dong
- School of Mechanical Engineering and Automation, Fuzhou University, Fuzhou, China.
- School of Mechatronics Engineering, Harbin Institute of Technology, Harbin, China
- State Key Laboratory of Robotics and System, Harbin Institute of Technology, Harbin, China
| | - Jiawen Lin
- School of Mechanical Engineering and Automation, Fuzhou University, Fuzhou, China.
| | - Yihui Tao
- Department of Automation Control and System Engineering, University of Sheffield, Sheffield, UK
| | - Yuan Jia
- Sino-German College of Intelligent Manufacturing, Shenzhen Technology University, Shenzhen, China
| | - Lining Sun
- School of Mechatronics Engineering, Harbin Institute of Technology, Harbin, China
- State Key Laboratory of Robotics and System, Harbin Institute of Technology, Harbin, China
| | - Wen Jung Li
- Department of Mechanical Engineering, City University of Hong Kong, Hong Kong, China
| | - Hao Sun
- School of Mechanical Engineering and Automation, Fuzhou University, Fuzhou, China.
- School of Mechatronics Engineering, Harbin Institute of Technology, Harbin, China
- Research Center of Aerospace Mechanism and Control, Harbin Institute of Technology, Harbin, China
| |
Collapse
|
2
|
Lin J, Li S, Qin N, Ding S. Entity recognition of railway signal equipment fault information based on RoBERTa-wwm and deep learning integration. MATHEMATICAL BIOSCIENCES AND ENGINEERING : MBE 2024; 21:1228-1248. [PMID: 38303462 DOI: 10.3934/mbe.2024052] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/03/2024]
Abstract
The operation and maintenance of railway signal systems create a significant and complex quantity of text data about faults. Aiming at the problems of fuzzy entity boundaries and low accuracy of entity recognition in the field of railway signal equipment faults, this paper provides a method for entity recognition of railway signal equipment fault information based on RoBERTa-wwm and deep learning integration. First, the model utilizes the RoBERTa-wwm pretrained language model to get the word vector of text sequences. Second, a parallel network consisting of a BiLSTM and a CNN is constructed to obtain the context feature information and the local attention information, respectively. Third, the feature vectors output from BiLSTM and CNN are combined and fed into MHA, focusing on extracting key feature information and mining the connection between different features. Finally, the label sequences with constraint relationships are outputted in CRF to complete the entity recognition task. The experimental analysis is carried out with fault text of railway signal equipment in the past ten years, and the experimental results show that the model has a higher evaluation index compared with the traditional model on this dataset, in which the precision, recall and F1 value are 93.25%, 92.45%, and 92.85%, respectively.
Collapse
Affiliation(s)
- Junting Lin
- School of Automation and Electrical Engineering, Lanzhou Jiaotong University, Lanzhou 730070, China
- The Center of National Railway Intelligent Transportation System Engineering and Technology, China Academy of Railway Sciences Corporation Limited, Beijing 100081, China
| | - Shan Li
- School of Automation and Electrical Engineering, Lanzhou Jiaotong University, Lanzhou 730070, China
| | - Ning Qin
- The Center of National Railway Intelligent Transportation System Engineering and Technology, China Academy of Railway Sciences Corporation Limited, Beijing 100081, China
- Signal and Communication Research Institute, China Academy of Railway Sciences Corporation Limited, Beijing 100081, China
| | - Shuxin Ding
- Signal and Communication Research Institute, China Academy of Railway Sciences Corporation Limited, Beijing 100081, China
| |
Collapse
|
3
|
Konieczka P, Raczyński L, Wiślicki W, Fedoruk O, Klimaszewski K, Kopka P, Krzemień W, Shopa RY, Baran J, Coussat A, Chug N, Curceanu C, Czerwiński E, Dadgar M, Dulski K, Gajos A, Hiesmayr BC, Kacprzak K, Kapłon Ł, Korcyl G, Kozik T, Kumar D, Niedźwiecki S, Parzych S, Río EPD, Sharma S, Shivani S, Skurzok M, Stępień EŁ, Tayefi F, Moskal P. Transformation of PET raw data into images for event classification using convolutional neural networks. MATHEMATICAL BIOSCIENCES AND ENGINEERING : MBE 2023; 20:14938-14958. [PMID: 37679166 DOI: 10.3934/mbe.2023669] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/09/2023]
Abstract
In positron emission tomography (PET) studies, convolutional neural networks (CNNs) may be applied directly to the reconstructed distribution of radioactive tracers injected into the patient's body, as a pattern recognition tool. Nonetheless, unprocessed PET coincidence data exist in tabular format. This paper develops the transformation of tabular data into n-dimensional matrices, as a preparation stage for classification based on CNNs. This method explicitly introduces a nonlinear transformation at the feature engineering stage and then uses principal component analysis to create the images. We apply the proposed methodology to the classification of simulated PET coincidence events originating from NEMA IEC and anthropomorphic XCAT phantom. Comparative studies of neural network architectures, including multilayer perceptron and convolutional networks, were conducted. The developed method increased the initial number of features from 6 to 209 and gave the best precision results (79.8) for all tested neural network architectures; it also showed the smallest decrease when changing the test data to another phantom.
Collapse
Affiliation(s)
- Paweł Konieczka
- Department of Complex Systems, National Centre for Nuclear Research, 05-400 Świerk, Poland
| | - Lech Raczyński
- Department of Complex Systems, National Centre for Nuclear Research, 05-400 Świerk, Poland
| | - Wojciech Wiślicki
- Department of Complex Systems, National Centre for Nuclear Research, 05-400 Świerk, Poland
| | - Oleksandr Fedoruk
- Department of Complex Systems, National Centre for Nuclear Research, 05-400 Świerk, Poland
| | - Konrad Klimaszewski
- Department of Complex Systems, National Centre for Nuclear Research, 05-400 Świerk, Poland
| | - Przemysław Kopka
- Department of Complex Systems, National Centre for Nuclear Research, 05-400 Świerk, Poland
| | - Wojciech Krzemień
- High Energy Physics Division, National Centre for Nuclear Research, 05-400 Świerk, Poland
| | - Roman Y Shopa
- Department of Complex Systems, National Centre for Nuclear Research, 05-400 Świerk, Poland
| | - Jakub Baran
- Marian Smoluchowski Institute of Physics, Jagiellonian University, 31-348 Cracow, Poland
- Center for Theranostics, Jagiellonian University, 31-348 Cracow, Poland
| | - Aurélien Coussat
- Marian Smoluchowski Institute of Physics, Jagiellonian University, 31-348 Cracow, Poland
- Center for Theranostics, Jagiellonian University, 31-348 Cracow, Poland
| | - Neha Chug
- Marian Smoluchowski Institute of Physics, Jagiellonian University, 31-348 Cracow, Poland
- Center for Theranostics, Jagiellonian University, 31-348 Cracow, Poland
| | | | - Eryk Czerwiński
- Marian Smoluchowski Institute of Physics, Jagiellonian University, 31-348 Cracow, Poland
- Center for Theranostics, Jagiellonian University, 31-348 Cracow, Poland
| | - Meysam Dadgar
- Marian Smoluchowski Institute of Physics, Jagiellonian University, 31-348 Cracow, Poland
- Center for Theranostics, Jagiellonian University, 31-348 Cracow, Poland
| | - Kamil Dulski
- Marian Smoluchowski Institute of Physics, Jagiellonian University, 31-348 Cracow, Poland
- Center for Theranostics, Jagiellonian University, 31-348 Cracow, Poland
| | - Aleksander Gajos
- Marian Smoluchowski Institute of Physics, Jagiellonian University, 31-348 Cracow, Poland
- Center for Theranostics, Jagiellonian University, 31-348 Cracow, Poland
| | | | - Krzysztof Kacprzak
- Marian Smoluchowski Institute of Physics, Jagiellonian University, 31-348 Cracow, Poland
- Center for Theranostics, Jagiellonian University, 31-348 Cracow, Poland
| | - Łukasz Kapłon
- Marian Smoluchowski Institute of Physics, Jagiellonian University, 31-348 Cracow, Poland
- Center for Theranostics, Jagiellonian University, 31-348 Cracow, Poland
| | - Grzegorz Korcyl
- Marian Smoluchowski Institute of Physics, Jagiellonian University, 31-348 Cracow, Poland
- Center for Theranostics, Jagiellonian University, 31-348 Cracow, Poland
| | - Tomasz Kozik
- Marian Smoluchowski Institute of Physics, Jagiellonian University, 31-348 Cracow, Poland
- Center for Theranostics, Jagiellonian University, 31-348 Cracow, Poland
| | - Deepak Kumar
- Marian Smoluchowski Institute of Physics, Jagiellonian University, 31-348 Cracow, Poland
- Center for Theranostics, Jagiellonian University, 31-348 Cracow, Poland
| | - Szymon Niedźwiecki
- Marian Smoluchowski Institute of Physics, Jagiellonian University, 31-348 Cracow, Poland
- Center for Theranostics, Jagiellonian University, 31-348 Cracow, Poland
| | - Szymon Parzych
- Marian Smoluchowski Institute of Physics, Jagiellonian University, 31-348 Cracow, Poland
- Center for Theranostics, Jagiellonian University, 31-348 Cracow, Poland
| | - Elena Pérez Del Río
- Marian Smoluchowski Institute of Physics, Jagiellonian University, 31-348 Cracow, Poland
- Center for Theranostics, Jagiellonian University, 31-348 Cracow, Poland
| | - Sushil Sharma
- Marian Smoluchowski Institute of Physics, Jagiellonian University, 31-348 Cracow, Poland
- Center for Theranostics, Jagiellonian University, 31-348 Cracow, Poland
| | - Shivani Shivani
- Marian Smoluchowski Institute of Physics, Jagiellonian University, 31-348 Cracow, Poland
- Center for Theranostics, Jagiellonian University, 31-348 Cracow, Poland
| | - Magdalena Skurzok
- Marian Smoluchowski Institute of Physics, Jagiellonian University, 31-348 Cracow, Poland
- Center for Theranostics, Jagiellonian University, 31-348 Cracow, Poland
- INFN, National Laboratory of Frascati, 00044 Frascati, Italy
| | - Ewa Łucja Stępień
- Marian Smoluchowski Institute of Physics, Jagiellonian University, 31-348 Cracow, Poland
- Center for Theranostics, Jagiellonian University, 31-348 Cracow, Poland
| | - Faranak Tayefi
- Marian Smoluchowski Institute of Physics, Jagiellonian University, 31-348 Cracow, Poland
- Center for Theranostics, Jagiellonian University, 31-348 Cracow, Poland
| | - Paweł Moskal
- Marian Smoluchowski Institute of Physics, Jagiellonian University, 31-348 Cracow, Poland
- Center for Theranostics, Jagiellonian University, 31-348 Cracow, Poland
| |
Collapse
|
4
|
Tsai HF, Podder S, Chen PY. Microsystem Advances through Integration with Artificial Intelligence. MICROMACHINES 2023; 14:826. [PMID: 37421059 PMCID: PMC10141994 DOI: 10.3390/mi14040826] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/09/2023] [Revised: 04/04/2023] [Accepted: 04/06/2023] [Indexed: 07/09/2023]
Abstract
Microfluidics is a rapidly growing discipline that involves studying and manipulating fluids at reduced length scale and volume, typically on the scale of micro- or nanoliters. Under the reduced length scale and larger surface-to-volume ratio, advantages of low reagent consumption, faster reaction kinetics, and more compact systems are evident in microfluidics. However, miniaturization of microfluidic chips and systems introduces challenges of stricter tolerances in designing and controlling them for interdisciplinary applications. Recent advances in artificial intelligence (AI) have brought innovation to microfluidics from design, simulation, automation, and optimization to bioanalysis and data analytics. In microfluidics, the Navier-Stokes equations, which are partial differential equations describing viscous fluid motion that in complete form are known to not have a general analytical solution, can be simplified and have fair performance through numerical approximation due to low inertia and laminar flow. Approximation using neural networks trained by rules of physical knowledge introduces a new possibility to predict the physicochemical nature. The combination of microfluidics and automation can produce large amounts of data, where features and patterns that are difficult to discern by a human can be extracted by machine learning. Therefore, integration with AI introduces the potential to revolutionize the microfluidic workflow by enabling the precision control and automation of data analysis. Deployment of smart microfluidics may be tremendously beneficial in various applications in the future, including high-throughput drug discovery, rapid point-of-care-testing (POCT), and personalized medicine. In this review, we summarize key microfluidic advances integrated with AI and discuss the outlook and possibilities of combining AI and microfluidics.
Collapse
Affiliation(s)
- Hsieh-Fu Tsai
- Department of Biomedical Engineering, Chang Gung University, Taoyuan City 333, Taiwan;
- Department of Neurosurgery, Chang Gung Memorial Hospital, Keelung, Keelung City 204, Taiwan
- Center for Biomedical Engineering, Chang Gung University, Taoyuan City 333, Taiwan
| | - Soumyajit Podder
- Department of Biomedical Engineering, Chang Gung University, Taoyuan City 333, Taiwan;
| | - Pin-Yuan Chen
- Department of Biomedical Engineering, Chang Gung University, Taoyuan City 333, Taiwan;
- Department of Neurosurgery, Chang Gung Memorial Hospital, Keelung, Keelung City 204, Taiwan
| |
Collapse
|