Biomimetic mimicry of formaldehyde-induced DNA-protein crosslinks in the confined space of a metal-organic framework

Recent advances in small-angle scattering techniques for MOF colloidal materials

This paper reviews the recent progress of small angle scattering (SAS) techniques, mainly including X-ray small angle scattering technique (SAXS) and neutron small angle scattering (SANS) technique, in the study of metal-organic framework (MOF) colloidal materials (CMOFs). First, we introduce the application research of SAXS technique in pristine MOFs materials, and review the studies on synthesis mechanism of MOF materials, the pore structures and fractal characteristics, as well as the spatial distribution and morphological evolution of foreign molecules in MOF composites and MOF-derived materials. Then, the applications of SANS technique in MOFs are summarized, with emphasis on SANS data processing method, structure modeling and quantitative structural information extraction. Finally, the characteristics and developments of SAS techniques are commented and prospected. It can be found that most studies on MOF materials with SAS techniques focus mainly on nanoporous structure characterization and the evolution of pore structures, or the spatial distribution of other foreign molecules loaded in MOFs. Indeed, SAS techniques take an irreplaceable role in revealing the structure and evolution of nanopores in CMOFs. We expect that this paper will help to understand the research status of SAS techniques on MOF materials and better to apply SAS techniques to conduct further research on MOF and related materials.

Nanoporous Crystalline Materials for the Recognition and Applications of Nucleic Acids

Nucleic acid plays a crucial role in countless biological processes. Hence, there is great interest in its detection and analysis in various fields from chemistry, biology, to medicine. Nanoporous crystalline materials exhibit enormous potential as an effective platform for nucleic acid recognition and application. These materials have highly ordered and uniform pore structures, as well as adjustable surface chemistry and pore size, making them good carriers for nucleic acid extraction, detection, and delivery. In this review, the latest developments in nanoporous crystalline materials, including metal organic frameworks (MOFs), covalent organic frameworks (COFs), and supramolecular organic frameworks (SOFs) for nucleic acid recognition and applications are discussed. Different strategies for functionalizing these materials are explored to specifically identify nucleic acid targets. Their applications in selective separation and detection of nucleic acids are highlighted. They can also be used as DNA/RNA sensors, gene delivery agents, host DNAzymes, and in DNA-based computing. Other applications include catalysis, data storage, and biomimetics. The development of novel nanoporous crystalline materials with enhanced biocompatibility has opened up new avenues in the fields of nucleic acid analysis and therapy, paving the way for the development of sensitive, selective, and cost-effective diagnostic and therapeutic tools with widespread applications.

Mimicking DNA Periodic Docking Grooves for Adaptive Identification of l-/d-Tryptophan in a Biological Metal-Organic Framework

Bioinspired metal-organic frameworks (MOFs) serve as suitable crystalline models for recognition and sensing of biomolecules mimicking natural processes, providing new ideas and concepts for cutting-edge biomedical applications. Here, we have successfully prepared a robust biological metal-organic framework with periodic docking grooves resembling the major and minor grooves in the DNA double helix structure, which can be used as unique recognition sites for selectively identifying l-/d-tryptophan (l-/d-Trp). Notably, successful encapsulation of Trp could be observed by single-crystal X-ray diffraction for the first time. Trp has matched size and shape to fit snugly into the major groove. Combined with isothermal titration calorimetry, it was found that ZnBTCHx could spontaneously capture l-/d-Trp through two different thermodynamic pathways: enthalpy-driven for encapsulating l-Trp and entropy-driven for uptaking d-Trp. Furthermore, molecular dynamics and density functional theory verified the role of hydrogen bonding and π-π/C-H···π interactions in the host-guest interface. This work provides unique insight for the construction of bionic models to mimic the natural binding properties, which is of great significance for the fields of pharmaceutical chemistry and biomedical science.

Formaldehyde recognition through aminal formation in a luminescent metal-organic framework

Two isostructural pillar-layer MOFs (JNU-105 and JNU-105-(NH2)2) have been successfully synthesized. JNU-105-(NH2)2 exhibits a red-shifted luminescence "turn on" for formaldehyde without the interference from other VOCs and a detection limit of 1.87 ppb. In situ single-crystal transformation studies confirm the aminal formation on the pillar linker, which was attributed to the exclusive luminescence response toward formaldehyde.