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For: Visudtiphole V, Thomas M, Chalton D, Lakey J. Refolding of Escherichia coli outer membrane protein F in detergent creates LPS-free trimers and asymmetric dimers. Biochem J 2006;392:375-81. [PMID: 16153185 PMCID: PMC1316273 DOI: 10.1042/bj20051257] [Citation(s) in RCA: 37] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Number Cited by Other Article(s)
1
Herwig S, Kleinschmidt JH. The Formation of β-Strand Nine (β9) in the Folding and Insertion of BamA from an Unfolded Form into Lipid Bilayers. MEMBRANES 2023;13:247. [PMID: 36837750 PMCID: PMC9964827 DOI: 10.3390/membranes13020247] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/02/2023] [Revised: 02/10/2023] [Accepted: 02/14/2023] [Indexed: 06/18/2023]
2
Jeong WJ, Song WJ. Design and directed evolution of noncanonical β-stereoselective metalloglycosidases. Nat Commun 2022;13:6844. [PMID: 36369431 PMCID: PMC9652281 DOI: 10.1038/s41467-022-34713-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2021] [Accepted: 11/03/2022] [Indexed: 11/13/2022]  Open
3
Lee J, Song WJ. Folding of Circularly Permuted and Split Outer Membrane Protein F via Electrostatic Interactions with Terminal Residues. Biochemistry 2021;60:1787-1796. [PMID: 34060805 DOI: 10.1021/acs.biochem.1c00195] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
4
High-Yield Preparation of Outer Membrane Protein Efflux Pumps by in Vitro Refolding is Concentration Dependent. J Membr Biol 2021;254:41-50. [PMID: 33462665 DOI: 10.1007/s00232-020-00161-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2020] [Accepted: 11/24/2020] [Indexed: 10/22/2022]
5
Krajewska M, Koprowski P. Solubilization, purification, and functional reconstitution of human ROMK potassium channel in copolymer styrene-maleic acid (SMA) nanodiscs. BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES 2021;1863:183555. [PMID: 33444624 DOI: 10.1016/j.bbamem.2021.183555] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Received: 09/21/2020] [Revised: 12/13/2020] [Accepted: 01/04/2021] [Indexed: 12/18/2022]
6
Fake It 'Till You Make It-The Pursuit of Suitable Membrane Mimetics for Membrane Protein Biophysics. Int J Mol Sci 2020;22:ijms22010050. [PMID: 33374526 PMCID: PMC7793082 DOI: 10.3390/ijms22010050] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2020] [Revised: 12/17/2020] [Accepted: 12/19/2020] [Indexed: 12/13/2022]  Open
7
Role of Lipopolysaccharide in Protecting OmpT from Autoproteolysis during In Vitro Refolding. Biomolecules 2020;10:biom10060922. [PMID: 32570704 PMCID: PMC7356225 DOI: 10.3390/biom10060922] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2020] [Revised: 06/06/2020] [Accepted: 06/14/2020] [Indexed: 01/02/2023]  Open
8
Schüßler A, Herwig S, Kleinschmidt JH. Kinetics of Insertion and Folding of Outer Membrane Proteins by Gel Electrophoresis. Methods Mol Biol 2019;2003:145-162. [PMID: 31218617 DOI: 10.1007/978-1-4939-9512-7_7] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/03/2022]
9
Sanganna Gari RR, Seelheim P, Marsh B, Kiessling V, Creutz CE, Tamm LK. Quaternary structure of the small amino acid transporter OprG from Pseudomonas aeruginosa. J Biol Chem 2018;293:17267-17277. [PMID: 30237175 DOI: 10.1074/jbc.ra118.004461] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2018] [Revised: 09/13/2018] [Indexed: 02/01/2023]  Open
10
Ma H, Khan A, Nangia S. Dynamics of OmpF Trimer Formation in the Bacterial Outer Membrane of Escherichia coli. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2018;34:5623-5634. [PMID: 29166022 DOI: 10.1021/acs.langmuir.7b02653] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
11
Donnarumma D, Maestri C, Giammarinaro PI, Capriotti L, Bartolini E, Veggi D, Petracca R, Scarselli M, Norais N. Native State Organization of Outer Membrane Porins Unraveled by HDx-MS. J Proteome Res 2018;17:1794-1800. [PMID: 29619829 DOI: 10.1021/acs.jproteome.7b00830] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
12
Dhanasekar NN, Aliouane S, Winterhalter M, Pagès JM, Bolla JM. Peptide translocation across MOMP, the major outer membrane channel from Campylobacter jejuni. Biochem Biophys Rep 2017;11:79-83. [PMID: 28955771 PMCID: PMC5614690 DOI: 10.1016/j.bbrep.2017.06.007] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2016] [Revised: 04/12/2017] [Accepted: 06/22/2017] [Indexed: 11/17/2022]  Open
13
Engineering a Novel Porin OmpGF Via Strand Replacement from Computational Analysis of Sequence Motif. BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES 2017;1859:1180-1189. [PMID: 28341438 DOI: 10.1016/j.bbamem.2017.03.012] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/30/2016] [Revised: 02/20/2017] [Accepted: 03/18/2017] [Indexed: 12/12/2022]
14
Gram-negative trimeric porins have specific LPS binding sites that are essential for porin biogenesis. Proc Natl Acad Sci U S A 2016;113:E5034-43. [PMID: 27493217 DOI: 10.1073/pnas.1602382113] [Citation(s) in RCA: 95] [Impact Index Per Article: 11.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
15
Why do the outer membrane proteins OmpF from E. coli and OprP from P. aeruginosa prefer trimers? Simulation studies. J Mol Graph Model 2016;65:1-7. [DOI: 10.1016/j.jmgm.2016.02.002] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2015] [Revised: 12/18/2015] [Accepted: 02/06/2016] [Indexed: 01/27/2023]
16
Kleinschmidt JH. Folding of β-barrel membrane proteins in lipid bilayers - Unassisted and assisted folding and insertion. BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES 2015;1848:1927-43. [PMID: 25983306 DOI: 10.1016/j.bbamem.2015.05.004] [Citation(s) in RCA: 65] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/22/2015] [Revised: 05/06/2015] [Accepted: 05/07/2015] [Indexed: 01/08/2023]
17
Anand A, LeDoyt M, Karanian C, Luthra A, Koszelak-Rosenblum M, Malkowski MG, Puthenveetil R, Vinogradova O, Radolf JD. Bipartite Topology of Treponema pallidum Repeat Proteins C/D and I: OUTER MEMBRANE INSERTION, TRIMERIZATION, AND PORIN FUNCTION REQUIRE A C-TERMINAL β-BARREL DOMAIN. J Biol Chem 2015;290:12313-31. [PMID: 25805501 PMCID: PMC4424362 DOI: 10.1074/jbc.m114.629188] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2014] [Revised: 03/20/2015] [Indexed: 11/06/2022]  Open
18
Folding membrane proteins in vitro: A table and some comments. Arch Biochem Biophys 2014;564:314-26. [DOI: 10.1016/j.abb.2014.06.029] [Citation(s) in RCA: 44] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2014] [Revised: 06/17/2014] [Accepted: 06/23/2014] [Indexed: 12/23/2022]
19
Arunmanee W, Harris JR, Lakey JH. Outer membrane protein F stabilised with minimal amphipol forms linear arrays and LPS-dependent 2D crystals. J Membr Biol 2014;247:949-56. [PMID: 24585057 PMCID: PMC4196048 DOI: 10.1007/s00232-014-9640-5] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2013] [Accepted: 02/11/2014] [Indexed: 11/30/2022]
20
Rodrigues D, Farinha-Arcieri LE, Ventura AM, Chura-Chambi RM, Malavasi NV, Lemke LS, Guimarães JS, Ho PL, Morganti L. Effect of pressure on refolding of recombinant pentameric cholera toxin B. J Biotechnol 2014;173:98-105. [PMID: 24445168 PMCID: PMC7114129 DOI: 10.1016/j.jbiotec.2013.12.006] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2013] [Revised: 12/04/2013] [Accepted: 12/05/2013] [Indexed: 11/16/2022]
21
Su PC, Si W, Baker DL, Berger BW. High-yield membrane protein expression from E. coli using an engineered outer membrane protein F fusion. Protein Sci 2013;22:434-43. [PMID: 23345122 DOI: 10.1002/pro.2224] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2012] [Revised: 11/12/2012] [Accepted: 01/15/2013] [Indexed: 11/12/2022]
22
Roussel G, Perpète EA, Matagne A, Tinti E, Michaux C. Towards a universal method for protein refolding: The trimeric beta barrel membrane Omp2a as a test case. Biotechnol Bioeng 2012;110:417-23. [DOI: 10.1002/bit.24722] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2012] [Revised: 08/09/2012] [Accepted: 08/20/2012] [Indexed: 12/31/2022]
23
Roussel G, Matagne A, De Bolle X, Perpète E, Michaux C. Purification, refolding and characterization of the trimeric Omp2a outer membrane porin from Brucella melitensis. Protein Expr Purif 2012;83:198-204. [DOI: 10.1016/j.pep.2012.04.003] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2012] [Revised: 03/29/2012] [Accepted: 04/02/2012] [Indexed: 10/28/2022]
24
Balasubramaniam D, Arockiasamy A, Kumar PD, Sharma A, Krishnaswamy S. Asymmetric pore occupancy in crystal structure of OmpF porin from Salmonella typhi. J Struct Biol 2012;178:233-44. [PMID: 22525817 DOI: 10.1016/j.jsb.2012.04.005] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2011] [Revised: 04/03/2012] [Accepted: 04/07/2012] [Indexed: 11/25/2022]
25
Naveed H, Jimenez-Morales D, Tian J, Pasupuleti V, Kenney LJ, Liang J. Engineered oligomerization state of OmpF protein through computational design decouples oligomer dissociation from unfolding. J Mol Biol 2012;419:89-101. [PMID: 22391420 DOI: 10.1016/j.jmb.2012.02.043] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2012] [Revised: 02/24/2012] [Accepted: 02/25/2012] [Indexed: 12/14/2022]
26
Lolicato M, Reina S, Messina A, Guarino F, Winterhalter M, Benz R, De Pinto V. Generation of artificial channels by multimerization of β-strands from natural porin. Biol Chem 2011;392:617-24. [PMID: 21627534 DOI: 10.1515/bc.2011.063] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
27
Debnath D, Nielsen K, Otzen D. In vitro association of fragments of a β-sheet membrane protein. Biophys Chem 2010;148:112-20. [DOI: 10.1016/j.bpc.2010.03.004] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2010] [Revised: 03/09/2010] [Accepted: 03/10/2010] [Indexed: 11/16/2022]
28
Brenzel S, Cebi M, Reiß P, Koert U, Mootz HD. Expanding the Scope of ProteinTrans-Splicing to Fragment Ligation of an Integral Membrane Protein: Towards Modulation of Porin-Based Ion Channels by Chemical Modification. Chembiochem 2009;10:983-6. [DOI: 10.1002/cbic.200900039] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
29
Corsaro MM, Parrilli E, Lanzetta R, Naldi T, Pieretti G, Lindner B, Carpentieri A, Parrilli M, Tutino ML. The presence of OMP inclusion bodies in a Escherichia coli K-12 mutated strain is not related to lipopolysaccharide structure. J Biochem 2009;146:231-40. [PMID: 19364804 DOI: 10.1093/jb/mvp062] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
30
Priyadarshi A, Saleem Y, Nam KH, Kim KS, Park SY, Kim EE, Hwang KY. Structural insights of the MenD from Escherichia coli reveal ThDP affinity. Biochem Biophys Res Commun 2009;380:797-801. [DOI: 10.1016/j.bbrc.2009.01.168] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2009] [Accepted: 01/27/2009] [Indexed: 11/29/2022]
31
Quance MA, Travisano M. Effects of temperature on the fitness cost of resistance to bacteriophage T4 in Escherichia coli. Evolution 2009;63:1406-16. [PMID: 19222568 DOI: 10.1111/j.1558-5646.2009.00654.x] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
32
Mo Y, Lee BK, Ankner JF, Becker JM, Heller WT. Detergent-associated solution conformations of helical and beta-barrel membrane proteins. J Phys Chem B 2008;112:13349-54. [PMID: 18816091 PMCID: PMC2663797 DOI: 10.1021/jp801266r] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
33
Baboolal TG, Conroy MJ, Gill K, Ridley H, Visudtiphole V, Bullough PA, Lakey JH. Colicin N binds to the periphery of its receptor and translocator, outer membrane protein F. Structure 2008;16:371-9. [PMID: 18334212 PMCID: PMC2581486 DOI: 10.1016/j.str.2007.12.023] [Citation(s) in RCA: 43] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2007] [Revised: 12/20/2007] [Accepted: 12/21/2007] [Indexed: 11/24/2022]
34
Shah DS, Thomas MB, Phillips S, Cisneros DA, Le Brun AP, Holt SA, Lakey JH. Self-assembling layers created by membrane proteins on gold. Biochem Soc Trans 2007;35:522-6. [PMID: 17511643 DOI: 10.1042/bst0350522] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
35
Cisneros DA, Muller DJ, Daud SM, Lakey JH. An approach to prepare membrane proteins for single-molecule imaging. Angew Chem Int Ed Engl 2007;45:3252-6. [PMID: 16634099 DOI: 10.1002/anie.200504506] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
36
Cisneros DA, Muller DJ, Daud SM, Lakey JH. An Approach To Prepare Membrane Proteins for Single-Molecule Imaging. Angew Chem Int Ed Engl 2006. [DOI: 10.1002/ange.200504506] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
37
Minetti CASA, Remeta DP. Energetics of membrane protein folding and stability. Arch Biochem Biophys 2006;453:32-53. [PMID: 16712771 DOI: 10.1016/j.abb.2006.03.023] [Citation(s) in RCA: 42] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2006] [Accepted: 03/23/2006] [Indexed: 11/24/2022]
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