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Zhao R, Mao LJ, Zhang CL. Three new species of Trichoderma (Hypocreales, Hypocreaceae) from soils in China. MycoKeys 2023; 97:21-40. [PMID: 37181496 PMCID: PMC10170311 DOI: 10.3897/mycokeys.97.101635] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2023] [Accepted: 04/17/2023] [Indexed: 05/16/2023] Open
Abstract
Trichoderma spp. are diverse fungi with wide distribution. In this study, we report on three new species of Trichoderma, namely T.nigricans, T.densissimum and T.paradensissimum, collected from soils in China. Their phylogenetic position of these novel species was determined by analyzing the concatenated sequences of the second largest nuclear RNA polymerase subunit encoding gene (rpb2) and the translation elongation factor 1- alpha encoding gene (tef1). The results of the phylogenetic analysis showed that each new species formed a distinct clade: T.nigricans is a new member of the Atroviride Clade, and T.densissimum and T.paradensissimum belong to the Harzianum Clade. A detailed description of the morphology and cultural characteristics of the newly discovered Trichoderma species is provided, and these characteristics were compared with those of closely related species to better understand the taxonomic relationships within the Trichoderma.
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Affiliation(s)
- Rui Zhao
- Ministry of Agriculture Key Laboratory of Molecular Biology of Crop Pathogens and Insects, Key Laboratory of Biology of Crop Pathogens and Insects of Zhejiang Province, Institute of Biotechnology, Zhejiang University, Hangzhou 310058, ChinaZhejiang UniversityHangzhouChina
| | - Li-Juan Mao
- Ministry of Agriculture Key Laboratory of Molecular Biology of Crop Pathogens and Insects, Key Laboratory of Biology of Crop Pathogens and Insects of Zhejiang Province, Institute of Biotechnology, Zhejiang University, Hangzhou 310058, ChinaZhejiang UniversityHangzhouChina
| | - Chu-Long Zhang
- Ministry of Agriculture Key Laboratory of Molecular Biology of Crop Pathogens and Insects, Key Laboratory of Biology of Crop Pathogens and Insects of Zhejiang Province, Institute of Biotechnology, Zhejiang University, Hangzhou 310058, ChinaZhejiang UniversityHangzhouChina
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Afzal I, Sabir A, Sikandar S. Trichoderma: Biodiversity, Abundances, and Biotechnological Applications. Fungal Biol 2021. [DOI: 10.1007/978-3-030-60659-6_13] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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Ribera J, Fink S, Bas MDC, Schwarze FWMR. Integrated control of wood destroying basidiomycetes combining Cu-based wood preservatives and Trichoderma spp. PLoS One 2017; 12:e0174335. [PMID: 28379978 PMCID: PMC5381793 DOI: 10.1371/journal.pone.0174335] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2016] [Accepted: 03/07/2017] [Indexed: 12/19/2022] Open
Abstract
The production of new generation of wood preservatives (without addition of a co-biocide) in combination with an exchange of wood poles on identical sites with high fungal inoculum, has resulted in an increase of premature failures of wood utility poles in the last decades. Wood destroying basidiomycetes inhabiting sites where poles have been installed, have developed resistance against wood preservatives. The objective of the in vitro studies was to identify a Trichoderma spp. with a highly antagonistic potential against wood destroying basidiomycetes that is capable of colonizing Cu-rich environments. For this purpose, the activity of five Trichoderma spp. on Cu-rich medium was evaluated according to its growth and sporulation rates. The influence of the selected Trichoderma spp. on wood colonization and degradation by five wood destroying basidiomycetes was quantitatively analyzed by means of dry weight loss of wood specimens. Furthermore, the preventative effect of the selected Trichoderma spp. in combination with four Cu-based preservatives was also examined by mass loss and histological changes in the wood specimens. Trichoderma harzianum (T-720) was considered the biocontrol agent with higher antagonistic potential to colonize Cu-rich environments (up to 0.1% CuSO4 amended medium). T. harzianum demonstrated significant preventative effect on wood specimens against four wood destroying basidiomycetes. The combined effect of T. harzianum and Cu-based wood preservatives demonstrated that after 9 months incubation with two wood destroying basidiomycetes, wood specimens treated with 3.8 kg m-3 copper-chromium had weight losses between 55-65%, whereas containers previously treated with T. harzianum had significantly lower weight losses (0-25%). Histological studies on one of the wood destroying basidiomycetes revealed typical decomposition of wood cells by brown-rot fungi in Cu-impregnated samples, that were notably absent in wood specimens previously exposed to T. harzianum. It is concluded that carefully selected Trichoderma isolates can be used for integrated wood protection against a range of wood destroying basidiomycetes and may have potential for integrated wood protection in the field.
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Affiliation(s)
- Javier Ribera
- Applied Wood Materials, Empa, St. Gallen, Switzerland
- Professur für Forstbotanik, Albert-Ludwigs-Universität Freiburg, Freiburg im Breisgau, Germany
| | - Siegfried Fink
- Professur für Forstbotanik, Albert-Ludwigs-Universität Freiburg, Freiburg im Breisgau, Germany
| | - Maria del Carmen Bas
- Applied Statistics and Operational Research and Quality, Universitat Politècnica de València, València, Spain
| | - Francis W. M. R. Schwarze
- Applied Wood Materials, Empa, St. Gallen, Switzerland
- Professur für Forstbotanik, Albert-Ludwigs-Universität Freiburg, Freiburg im Breisgau, Germany
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Nongmaithem N, Roy A, Bhattacharya PM. Screening of Trichoderma isolates for their potential of biosorption of nickel and cadmium. Braz J Microbiol 2016; 47:305-13. [PMID: 26991295 PMCID: PMC4874587 DOI: 10.1016/j.bjm.2016.01.008] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2014] [Accepted: 08/10/2015] [Indexed: 11/24/2022] Open
Abstract
Fourteen Trichoderma isolates were evaluated for their tolerance to two heavy metals, nickel and cadmium. Three isolates, MT-4, UBT-18, and IBT-I, showed high levels of nickel tolerance, whereas MT-4, UBT-18, and IBT-II showed better tolerance of cadmium than the other isolates. Under nickel stress, biomass production increased up to a Ni concentration of 60ppm in all strains but then decreased as the concentrations of nickel were further increased. Among the nickel-tolerant isolates, UBT-18 produced significantly higher biomass upon exposure to nickel (up to 150ppm); however, the minimum concentration of nickel required to inhibit 50% of growth (MIC50) was highest in IBT-I. Among the cadmium-tolerant isolates, IBT-II showed both maximum biomass production and a maximum MIC50 value in cadmium stress. As the biomass of the Trichoderma isolates increased, a higher percentage of nickel removal was observed up to a concentration of 40ppm, followed by an increase in residual nickel and a decrease in biomass production at higher nickel concentrations in the medium. The increase in cadmium concentrations resulted in a decrease in biomass production and positively correlated with an increase in residual cadmium in the culture broth. Nickel and cadmium stress also influenced the sensitivity of the Trichoderma isolates to soil fungistasis. Isolates IBT-I and UBT-18 were most tolerant to fungistasis under nickel and cadmium stress, respectively.
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Affiliation(s)
- Nabakishor Nongmaithem
- Department of Plant Pathology, Uttar Banga Krishi Viswavidyalaya, Pundibari, Cooch Behar, West Bengal, India
| | - Ayon Roy
- Department of Plant Pathology, Uttar Banga Krishi Viswavidyalaya, Pundibari, Cooch Behar, West Bengal, India.
| | - Prateek Madhab Bhattacharya
- Department of Plant Pathology, Uttar Banga Krishi Viswavidyalaya, Pundibari, Cooch Behar, West Bengal, India
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Puglisi I, Faedda R, Sanzaro V, Lo Piero AR, Petrone G, Cacciola SO. Identification of differentially expressed genes in response to mercury I and II stress in Trichoderma harzianum. Gene 2012; 506:325-30. [PMID: 22789863 DOI: 10.1016/j.gene.2012.06.091] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2012] [Revised: 06/26/2012] [Accepted: 06/27/2012] [Indexed: 10/28/2022]
Abstract
Filamentous fungi are very promising organisms in both the control and the reduction of the amount of heavy metal released by human and industrial activities. In particular, Trichoderma harzianum demonstrated to be tolerant towards different heavy metals, such as mercury and cadmium, even though the mechanism underlying this tolerance is not fully understood. By using a particular strategy of the suppression subtractive hybridization technique, we were able to identify in the strain IMI 393899 of T. harzianum eight different genes up-regulated in the presence of mercury II with respect to cadmium. Among the genes identified, a possible role in the tolerance mechanism could be envisaged for hydrophobin, due to its ability to dissolve hydrophobic molecules into aqueous media. We also show that IMI 393899 grows at the same rate of control culture in the presence of mercury I and that all eight genes isolated were also up-regulated in this condition.
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Affiliation(s)
- Ivana Puglisi
- Dipartimento di Scienze delle Produzioni Agrarie e Alimentari, University of Catania, Italy
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Raspanti E, Cacciola SO, Gotor C, Romero LC, García I. Implications of cysteine metabolism in the heavy metal response in Trichoderma harzianum and in three Fusarium species. CHEMOSPHERE 2009; 76:48-54. [PMID: 19298998 DOI: 10.1016/j.chemosphere.2009.02.030] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/19/2008] [Revised: 02/10/2009] [Accepted: 02/11/2009] [Indexed: 05/27/2023]
Abstract
We studied the ability of four different fungal species, Trichoderma harzianum, Fusarium antophyllum, Fusarium compactum and Fusarium phyllophilum, to grow in the presence of heavy metals, and monitored their cysteine and glutathione content and the activity of O-acetylserine(thiol)lyase (OASTL), which is involved in cysteine biosynthesis. Zn and Pb did not affect fungal growth or sporulation at the concentrations used, whereas Cd and Hg did. In most cases, cysteine and glutathione content was higher when fungi were grown in the presence of toxic metals. As T. harzianum and F. phyllophilum presented the best growth rate on Cd and Hg, they were selected to further analyse the accumulation of toxic metals. Both species accumulated the four metals in large amounts. Using degenerate oligonucleotides based on fungal OASTL genes present in databases, partial OASTL DNA sequences were cloned by PCR from T. harzianum and F. phyllophilum, and the regulation of the OASTL genes under metal stress was analyzed. Cd produced the strongest increase in OASTL activity and mRNA levels in both fungi. The results suggest a possible correlation between cysteine metabolism and the heavy metal response in fungi.
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Affiliation(s)
- Estellita Raspanti
- Dipartimento di Scienze Entomologiche, Fitopatologiche, Microbiologiche agrarie e Zootecniche, Università degli Studi di Palermo, Palermo, Italy
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Verma M, Brar SK, Tyagi R, Surampalli R, Valéro J. Antagonistic fungi, Trichoderma spp.: Panoply of biological control. Biochem Eng J 2007. [DOI: 10.1016/j.bej.2007.05.012] [Citation(s) in RCA: 192] [Impact Index Per Article: 11.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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Izgü F, Altinbay D, Sertkaya A. Enzymic activity of the K5-type yeast killer toxin and its characterization. Biosci Biotechnol Biochem 2006; 69:2200-6. [PMID: 16306703 DOI: 10.1271/bbb.69.2200] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
K5-type yeast killer toxin secreted by P. anomala NCYC 434 cells has a broad killing spectrum. Competitive inhibiton of killer activity showed that glucans, mainly the beta-1,3 glucan, represent the primary toxin binding site within the cell wall of sensitive cells. Its hydrolytic activity on laminarin in an exo-like fashion revealed that the toxin exerts its killing effect by exo-beta-1,3-glucanase activity. Its specific activity on laminarin was 120 U/mg, and the Michaelis constants K(m) and V(max) for laminarin hydrolysis were 0.25 mg/ml and 370 micromol/min/mg. The toxin exerted its cytocidal effect after 2 h contact with the target cells. Production of the toxin by the cells was induced only when they were grown in culture media rich in beta-glucan sources, and the addition of glucose increased the specific production rate. The enzymic activity of the toxin was fully inhibited by Hg(+2), but increased with some other metal ions, most of all by Pb(+2).
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Affiliation(s)
- Fatih Izgü
- Department of Biological Sciences, Middle East Technical University, Ankara, Turkey.
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Kredics L, Manczinger L, Antal Z, Pénzes Z, Szekeres A, Kevei F, Nagy E. In vitro water activity and pH dependence of mycelial growth and extracellular enzyme activities of Trichoderma strains with biocontrol potential. J Appl Microbiol 2004; 96:491-8. [PMID: 14962129 DOI: 10.1111/j.1365-2672.2004.02167.x] [Citation(s) in RCA: 41] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
AIMS Water activity (aw) and pH are probably the most important environmental parameters affecting the activities of mycoparasitic Trichoderma strains. Therefore it is important to collect information on the effects of these factors on mycelial growth and on the in vitro activities of extracellular enzymes involved in nutrient competition (e.g. beta-glucosidase, cellobiohydrolase and beta-xylosidase) and mycoparasitism (e.g. N-acetyl-beta-glucosaminidase, trypsin-like protease and chymotrypsin-like protease) of Trichoderma strains with biocontrol potential. METHODS AND RESULTS Water activity and pH dependence of the linear mycelial growth of five examined Trichoderma strains belonging to three different species groups was examined on yeast extract and soil extract media. Maximal growth rates were observed at aw 0.997 and pH 4.0 in the case of all strains. The activities of the examined extracellular enzymes at different aw and pH values were determined spectrophotometrically after incubation with chromogenic p-nitrophenyl and p-nitroaniline substrates. Maximal enzyme activities were measured at aw 0.950 for beta-glucosidase, trypsin-like protease and chymotrypsin-like protease, at 0.910 for cellobiohydrolase and at 0.993 for beta-xylosidase and N-acetyl-beta-glucosaminidase enzymes. Optimal pH values are suggested to be at 5.0 for beta-glucosidase, cellobiohydrolase and N-acetyl-beta-glucosaminidase, at 3.0 for beta-xylosidase, at 6.0 for trypsin-like protease and between 6.0 and 7.0 for chymotrypsin-like protease activities, respectively. CONCLUSIONS Extracellular enzymes of the examined mycoparasitic Trichoderma strains are able to display activities under a wider range of aw and pH values than those allowing mycelial growth. SIGNIFICANCE AND IMPACT OF THE STUDY Data about the effects of aw and pH on mycelial growth and extracellular enzyme activities of Trichoderma reveal useful information about the applicability of biocontrol strains in agricultural soils with specific water and pH relations.
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Affiliation(s)
- L Kredics
- Microbiological Research Group, Hungarian Academy of Sciences and University of Szeged, Szeged, Hungary.
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