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Horstmann H, Michel NA, Sheng X, Hansen S, Lindau A, Pfeil K, Fernández MC, Marchini T, Winkels H, Mitre LS, Abogunloko T, Li X, Mwinyella TBN, Gissler MC, Bugger H, Heidt T, Buscher K, Hilgendorf I, Stachon P, Piepenburg S, Verheyen N, Rathner T, Gerhardt T, Siegel PM, Oswald WK, Cohnert T, Zernecke A, Madl J, Kohl P, Foks AC, von zur Muehlen C, Westermann D, Zirlik A, Wolf D. Cross-species single-cell RNA sequencing reveals divergent phenotypes and activation states of adaptive immunity in human carotid and experimental murine atherosclerosis. Cardiovasc Res 2024; 120:1713-1726. [PMID: 39041203 PMCID: PMC11587564 DOI: 10.1093/cvr/cvae154] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 11/16/2023] [Revised: 05/07/2024] [Accepted: 05/23/2024] [Indexed: 07/24/2024] Open
Abstract
AIMS The distinct functions of immune cells in atherosclerosis have been mostly defined by pre-clinical mouse studies. Contrastingly, the immune cell composition of human atherosclerotic plaques and their contribution to disease progression are only poorly understood. It remains uncertain whether genetic animal models allow for valuable translational approaches. METHODS AND RESULTS Single-cell RNA-sequencing (scRNA-seq) was performed to define the immune cell landscape in human carotid atherosclerotic plaques. The human immune cell repertoire demonstrated an unexpectedly high heterogeneity and was dominated by cells of the T-cell lineage, a finding confirmed by immunohistochemistry. Bioinformatical integration with 7 mouse scRNA-seq data sets from adventitial and atherosclerotic vascular tissue revealed a total of 51 identities of cell types and differentiation states, of which some were only poorly conserved between species and exclusively found in humans. Locations, frequencies, and transcriptional programmes of immune cells in mouse models did not resemble the immune cell landscape in human carotid atherosclerosis. In contrast to standard mouse models of atherosclerosis, human plaque leucocytes were dominated by several T-cell phenotypes with transcriptional hallmarks of T-cell activation and memory formation, T-cell receptor, and pro-inflammatory signalling. Only mice at the age of 22 months partially resembled the activated T-cell phenotype. In a validation cohort of 43 patients undergoing carotid endarterectomy, the abundance of activated immune cell subsets in the plaque defined by multi-colour flow cytometry associated with the extent of clinical atherosclerosis. CONCLUSION Integrative scRNA-seq reveals a substantial difference in the immune cell composition of murine and human carotid atherosclerosis-a finding that questions the translational value of standard mouse models for adaptive immune cell studies. Clinical associations suggest a specific role for T-cell driven (auto-)immunity in human plaque formation and instability.
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Affiliation(s)
- Hauke Horstmann
- Department of Cardiology and Angiology I, Medical Center, University of Freiburg, 79106 Freiburg, Germany
- Faculty of Medicine, University of Freiburg, 79106 Freiburg, Germany
- Division of Cardiology, Department of Medicine, NYU Cardiovascular Research Center, NYU Grossmann School of Medicine, 10016 New York, NY, USA
| | - Nathaly Anto Michel
- Department of Cardiology, University Heart Center Graz, Medical University of Graz, 8036 Graz, Austria
| | - Xia Sheng
- Department of Cardiology and Angiology I, Medical Center, University of Freiburg, 79106 Freiburg, Germany
- Faculty of Medicine, University of Freiburg, 79106 Freiburg, Germany
| | - Sophie Hansen
- Department of Cardiology and Angiology I, Medical Center, University of Freiburg, 79106 Freiburg, Germany
- Faculty of Medicine, University of Freiburg, 79106 Freiburg, Germany
| | - Alexandra Lindau
- Department of Cardiology and Angiology I, Medical Center, University of Freiburg, 79106 Freiburg, Germany
- Faculty of Medicine, University of Freiburg, 79106 Freiburg, Germany
| | - Katharina Pfeil
- Division of Cardiology, Department of Medicine, NYU Cardiovascular Research Center, NYU Grossmann School of Medicine, 10016 New York, NY, USA
| | - Marbely C Fernández
- Faculty of Medicine, University of Freiburg, 79106 Freiburg, Germany
- Institute for Experimental Cardiovascular Medicine, Heart Centre, University of Freiburg, 79106 Freiburg, Germany
| | - Timoteo Marchini
- Department of Cardiology and Angiology I, Medical Center, University of Freiburg, 79106 Freiburg, Germany
- Faculty of Medicine, University of Freiburg, 79106 Freiburg, Germany
| | - Holger Winkels
- Department of Cardiology, Faculty of Medicine and University Hospital Cologne, University of Cologne, 50923 Cologne, Germany
| | - Lucia Sol Mitre
- Department of Cardiology and Angiology I, Medical Center, University of Freiburg, 79106 Freiburg, Germany
- Faculty of Medicine, University of Freiburg, 79106 Freiburg, Germany
- Spemann Graduate School of Biology and Medicine (SGBM), University of Freiburg, 79106 Freiburg, Germany
| | - Tijani Abogunloko
- Department of Cardiology and Angiology I, Medical Center, University of Freiburg, 79106 Freiburg, Germany
- Faculty of Medicine, University of Freiburg, 79106 Freiburg, Germany
- Spemann Graduate School of Biology and Medicine (SGBM), University of Freiburg, 79106 Freiburg, Germany
| | - Xiaowei Li
- Department of Cardiology and Angiology I, Medical Center, University of Freiburg, 79106 Freiburg, Germany
- Faculty of Medicine, University of Freiburg, 79106 Freiburg, Germany
| | - Timothy Bon-Nawul Mwinyella
- Department of Cardiology and Angiology I, Medical Center, University of Freiburg, 79106 Freiburg, Germany
- Faculty of Medicine, University of Freiburg, 79106 Freiburg, Germany
| | - Mark Colin Gissler
- Department of Cardiology and Angiology I, Medical Center, University of Freiburg, 79106 Freiburg, Germany
- Faculty of Medicine, University of Freiburg, 79106 Freiburg, Germany
| | - Heiko Bugger
- Faculty of Medicine, University of Freiburg, 79106 Freiburg, Germany
- Department of Cardiology, University Heart Center Graz, Medical University of Graz, 8036 Graz, Austria
| | - Timo Heidt
- Department of Cardiology and Angiology I, Medical Center, University of Freiburg, 79106 Freiburg, Germany
- Faculty of Medicine, University of Freiburg, 79106 Freiburg, Germany
| | - Konrad Buscher
- Division of General Internal Medicine, Nephrology and Rheumatology, Department of Medicine, University Hospital of Münster, 48149 Münster, Germany
| | - Ingo Hilgendorf
- Department of Cardiology and Angiology I, Medical Center, University of Freiburg, 79106 Freiburg, Germany
- Faculty of Medicine, University of Freiburg, 79106 Freiburg, Germany
| | - Peter Stachon
- Department of Cardiology and Angiology I, Medical Center, University of Freiburg, 79106 Freiburg, Germany
- Faculty of Medicine, University of Freiburg, 79106 Freiburg, Germany
| | - Sven Piepenburg
- Department of Cardiology and Angiology I, Medical Center, University of Freiburg, 79106 Freiburg, Germany
- Faculty of Medicine, University of Freiburg, 79106 Freiburg, Germany
| | - Nicolas Verheyen
- Department of Cardiology, University Heart Center Graz, Medical University of Graz, 8036 Graz, Austria
| | - Thomas Rathner
- Department of Cardiology, University Heart Center Graz, Medical University of Graz, 8036 Graz, Austria
| | - Teresa Gerhardt
- Department of Cardiology, Angiology and Intensive Care Medicine CBF, Deutsches Herzzentrum der Charité, and Berlin Institute of Health (BIH), 13353 Berlin, Germany
- DZHK (German Centre for Cardiovascular Research), partner site Berlin , 13353 Berlin, Germany
- Cardiovascular Research Institute and the Department of Medicine, Cardiology, Icahn School of Medicine at Mount Sinai, 10029 New York, NY, USA
| | - Patrick Malcolm Siegel
- Department of Cardiology and Angiology I, Medical Center, University of Freiburg, 79106 Freiburg, Germany
- Faculty of Medicine, University of Freiburg, 79106 Freiburg, Germany
| | | | - Tina Cohnert
- Department of Vascular Surgery, Medical University of Graz, 8036 Graz, Austria
| | - Alma Zernecke
- Institute of Experimental Biomedicine, University Hospital Würzburg, 97080 Würzburg, Germany
| | - Josef Madl
- Faculty of Medicine, University of Freiburg, 79106 Freiburg, Germany
- Institute for Experimental Cardiovascular Medicine, Heart Centre, University of Freiburg, 79106 Freiburg, Germany
| | - Peter Kohl
- Faculty of Medicine, University of Freiburg, 79106 Freiburg, Germany
- Institute for Experimental Cardiovascular Medicine, Heart Centre, University of Freiburg, 79106 Freiburg, Germany
| | - Amanda C Foks
- Leiden Academic Centre for Drug Research, Division of BioTherapeutics, Leiden University, 2333 CC Leiden, The Netherlands
| | - Constantin von zur Muehlen
- Department of Cardiology and Angiology I, Medical Center, University of Freiburg, 79106 Freiburg, Germany
- Faculty of Medicine, University of Freiburg, 79106 Freiburg, Germany
| | - Dirk Westermann
- Department of Cardiology and Angiology I, Medical Center, University of Freiburg, 79106 Freiburg, Germany
- Faculty of Medicine, University of Freiburg, 79106 Freiburg, Germany
| | - Andreas Zirlik
- Department of Cardiology, University Heart Center Graz, Medical University of Graz, 8036 Graz, Austria
| | - Dennis Wolf
- Department of Cardiology and Angiology I, Medical Center, University of Freiburg, 79106 Freiburg, Germany
- Faculty of Medicine, University of Freiburg, 79106 Freiburg, Germany
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