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Reidelbach M, Bai M, Schneeberger M, Zöllner MS, Kubicek K, Kirchberg H, Bressler C, Thorwart M, Herrmann C. Solvent Dynamics of Aqueous Halides before and after Photoionization. J Phys Chem B 2023; 127:1399-1413. [PMID: 36728132 DOI: 10.1021/acs.jpcb.2c07992] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
Abstract
Electron transfer reactions can be strongly influenced by solvent dynamics. We study the photoionization of halides in water as a model system for such reactions. There are no internal nuclear degrees of freedom in the solute, allowing the dynamics of the solvent to be uniquely identified. We simulate the equilibrium solvent dynamics for Cl-, Br-, I-, and their respective neutral atoms in water, comparing quantum mechanical/molecular mechanical (QM/MM) and classical molecular dynamics (MD) methods. On the basis of the obtained configurations, we calculate the extended X-ray absorption fine structure (EXAFS) spectra rigorously based on the MD snapshots and compare them in detail with other theoretical and experimental results available in the literature. We find our EXAFS spectra based on QM/MM MD simulations in good agreement with their experimental counterparts for the ions. Classical MD simulations for the ions lead to EXAFS spectra that agree equally well with the experiment when it comes to the oscillatory period of the signal, even though they differ from the QM/MM radial distribution functions extracted from the MD. The amplitude is, however, considerably overestimated. This suggests that to judge the reliability of theoretical simulation methods or to elucidate fine details of the atomistic dynamics of the solvent based on EXAFS spectra, the amplitude as well as the oscillatory period need to be considered. If simulations fail qualitatively, as does the classical MD for the aqueous neutral halogen atoms, the resulting EXAFS will also be strongly affected in both oscillatory period and amplitude. The good reliability of QM/MM-based EXAFS simulations, together with clear qualitative differences in the EXAFS spectra found between halides and their atomic counterparts, suggests that a combined theory and experimental EXAFS approach is suitable for elucidating the nonequilibrium solvent dynamics in the photoionization of halides and possibly also for electron transfer reactions in more complex systems.
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Affiliation(s)
- Marco Reidelbach
- Department of Chemistry, Universität Hamburg, Harbor Bldg. 610, Luruper Chaussee 149, 22761Hamburg, Germany.,The Hamburg Centre of Ultrafast Imaging, Luruper Chaussee 149, 22761Hamburg, Germany
| | - Mei Bai
- The Hamburg Centre of Ultrafast Imaging, Luruper Chaussee 149, 22761Hamburg, Germany.,I. Institut für Theoretische Physik, Universität Hamburg, Notkestr. 9, 22607Hamburg, Germany
| | - Michaela Schneeberger
- Department of Chemistry, Universität Hamburg, Harbor Bldg. 610, Luruper Chaussee 149, 22761Hamburg, Germany.,The Hamburg Centre of Ultrafast Imaging, Luruper Chaussee 149, 22761Hamburg, Germany
| | - Martin Sebastian Zöllner
- Department of Chemistry, Universität Hamburg, Harbor Bldg. 610, Luruper Chaussee 149, 22761Hamburg, Germany.,The Hamburg Centre of Ultrafast Imaging, Luruper Chaussee 149, 22761Hamburg, Germany
| | - Katharina Kubicek
- The Hamburg Centre of Ultrafast Imaging, Luruper Chaussee 149, 22761Hamburg, Germany.,Department of Physics, Universität Hamburg, Notkestr. 85, 22607Hamburg, Germany.,European XFEL, Holzkoppel 4, 22869Schenefeld, Germany
| | - Henning Kirchberg
- The Hamburg Centre of Ultrafast Imaging, Luruper Chaussee 149, 22761Hamburg, Germany.,I. Institut für Theoretische Physik, Universität Hamburg, Notkestr. 9, 22607Hamburg, Germany
| | - Christian Bressler
- The Hamburg Centre of Ultrafast Imaging, Luruper Chaussee 149, 22761Hamburg, Germany.,Department of Physics, Universität Hamburg, Notkestr. 85, 22607Hamburg, Germany.,European XFEL, Holzkoppel 4, 22869Schenefeld, Germany
| | - Michael Thorwart
- The Hamburg Centre of Ultrafast Imaging, Luruper Chaussee 149, 22761Hamburg, Germany.,I. Institut für Theoretische Physik, Universität Hamburg, Notkestr. 9, 22607Hamburg, Germany
| | - Carmen Herrmann
- Department of Chemistry, Universität Hamburg, Harbor Bldg. 610, Luruper Chaussee 149, 22761Hamburg, Germany.,The Hamburg Centre of Ultrafast Imaging, Luruper Chaussee 149, 22761Hamburg, Germany
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2
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Kinigstein ED, Jennings G, Kurtz CA, March AM, Zuo X, Chen LX, Attenkofer K, Zhang X. X-ray multi-probe data acquisition: A novel technique for laser pump x-ray transient absorption spectroscopy. THE REVIEW OF SCIENTIFIC INSTRUMENTS 2021; 92:085109. [PMID: 34470434 DOI: 10.1063/5.0050713] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/18/2021] [Accepted: 08/09/2021] [Indexed: 06/13/2023]
Abstract
We report the development and implementation of a novel data acquisition (DAQ) technique for synchrotron-based laser pump X-ray Transient Absorption (XTA) spectroscopy, called X-ray Multi-Probe DAQ (XMP DAQ). This technique utilizes high performance analog to digital converters and home-built software to efficiently measure and process the XTA signal from all x-ray pulses between laser excitations. XMP DAQ generates a set of time resolved x-ray absorption spectra at thousands of different pump-probe time delays simultaneously. Two distinct XMP DAQ schemes are deployed to accommodate different synchrotron storage ring filling patterns. Current Integration (CI) DAQ is a quasi-analog technique that implements a fitting procedure to extract the time resolved absorption intensity from the averaged fluorescence detector response. The fitting procedure eliminates issues associated with small drifts in the voltage baseline and greatly enhances the accuracy of the technique. Photon Counting (PC) DAQ is a binary technique that uses a time resolved histogram to calculate the XTA spectrum. While PC DAQ is suited to measure XTA data with closely spaced x-ray pulses (∼10 ns) and a low count rate (<1 detected photon/pulse), CI DAQ works best for widely spaced pulses (tens of ns or greater) with a high count rate (>1 detected photon/pulse). XMP DAQ produces a two-dimensional XTA dataset, enabling efficient quantitative analysis of photophysical and photochemical processes from the sub-nanosecond timescale to 100 μs and longer.
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Affiliation(s)
- Eli D Kinigstein
- X-ray Sciences Division, Argonne National Laboratory, Lemont, Illinois 60439, USA
| | - Guy Jennings
- X-ray Sciences Division, Argonne National Laboratory, Lemont, Illinois 60439, USA
| | - Charles A Kurtz
- X-ray Sciences Division, Argonne National Laboratory, Lemont, Illinois 60439, USA
| | - Anne Marie March
- Chemical Sciences and Engineering Division, Argonne National Laboratory, Argonne, Illinois 60439, USA
| | - Xiaobing Zuo
- X-ray Sciences Division, Argonne National Laboratory, Lemont, Illinois 60439, USA
| | - Lin X Chen
- Chemical Sciences and Engineering Division, Argonne National Laboratory, Argonne, Illinois 60439, USA
| | - Klaus Attenkofer
- Experimental Division, ALBA Synchrotron Light Source, Carrer de la Llum 2-26, Cerdanyola del Vallès, Barcelona 08290, Spain
| | - Xiaoyi Zhang
- X-ray Sciences Division, Argonne National Laboratory, Lemont, Illinois 60439, USA
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3
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Jonas A, Stiel H, Glöggler L, Dahm D, Dammer K, Kanngießer B, Mantouvalou I. Towards Poisson noise limited optical pump soft X-ray probe NEXAFS spectroscopy using a laser-produced plasma source. OPTICS EXPRESS 2019; 27:36524-36537. [PMID: 31873429 DOI: 10.1364/oe.27.036524] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/06/2019] [Accepted: 09/13/2019] [Indexed: 06/10/2023]
Abstract
We present a laboratory setup for near edge X-ray absorption spectroscopy (NEXAFS) in the soft X-ray regime between 284 eV to 1303 eV with a resolving power of up to 1370. Based on a laser-produced plasma source, a pair of identical reflection zone plates and an X-ray CCD camera, the setup is intended for optical pump X-ray probe NEXAFS measurements with a detectable change in absorption of the excited sample down to 10-4 and 500 ps time resolution. Because of the high stability of the source the statistical error only depends on the detector response and the number of photons detected and can reach the detector noise limit after a couple of thousands single shots. Thus, structure-function relationship investigations of bio-molecules are rendered feasible in the laboratory.
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4
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Dicke B, Hoffmann A, Stanek J, Rampp MS, Grimm-Lebsanft B, Biebl F, Rukser D, Maerz B, Göries D, Naumova M, Biednov M, Neuber G, Wetzel A, Hofmann SM, Roedig P, Meents A, Bielecki J, Andreasson J, Beyerlein KR, Chapman HN, Bressler C, Zinth W, Rübhausen M, Herres-Pawlis S. Transferring the entatic-state principle to copper photochemistry. Nat Chem 2018; 10:355-362. [DOI: 10.1038/nchem.2916] [Citation(s) in RCA: 46] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2017] [Accepted: 11/17/2017] [Indexed: 01/10/2023]
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5
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Chergui M, Collet E. Photoinduced Structural Dynamics of Molecular Systems Mapped by Time-Resolved X-ray Methods. Chem Rev 2017; 117:11025-11065. [DOI: 10.1021/acs.chemrev.6b00831] [Citation(s) in RCA: 150] [Impact Index Per Article: 21.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Affiliation(s)
- Majed Chergui
- Laboratoire
de Spectroscopie Ultrarapide (LSU), ISIC, and Lausanne Centre for
Ultrafast Science (LACUS), Faculté des Sciences de Base, Ecole Polytechnique Fédérale de Lausanne, Lausanne CH-1015, Switzerland
| | - Eric Collet
- Univ Rennes 1, CNRS, Institut de Physique de Rennes, UMR 6251, UBL, Rennes F-35042, France
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6
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Göries D, Dicke B, Roedig P, Stübe N, Meyer J, Galler A, Gawelda W, Britz A, Geßler P, Sotoudi Namin H, Beckmann A, Schlie M, Warmer M, Naumova M, Bressler C, Rübhausen M, Weckert E, Meents A. Time-resolved pump and probe x-ray absorption fine structure spectroscopy at beamline P11 at PETRA III. THE REVIEW OF SCIENTIFIC INSTRUMENTS 2016; 87:053116. [PMID: 27250401 DOI: 10.1063/1.4948596] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
We report about the development and implementation of a new setup for time-resolved X-ray absorption fine structure spectroscopy at beamline P11 utilizing the outstanding source properties of the low-emittance PETRA III synchrotron storage ring in Hamburg. Using a high intensity micrometer-sized X-ray beam in combination with two positional feedback systems, measurements were performed on the transition metal complex fac-Tris[2-phenylpyridinato-C2,N]iridium(III) also referred to as fac-Ir(ppy)3. This compound is a representative of the phosphorescent iridium(III) complexes, which play an important role in organic light emitting diode (OLED) technology. The experiment could directly prove the anticipated photoinduced charge transfer reaction. Our results further reveal that the temporal resolution of the experiment is limited by the PETRA III X-ray bunch length of ∼103 ps full width at half maximum (FWHM).
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Affiliation(s)
- D Göries
- DESY Photon Science, Deutsches Elektronen-Synchrotron (DESY), Notkestraße 85, 22607 Hamburg, Germany
| | - B Dicke
- Center for Free-Electron Laser Science (CFEL), Luruper Chaussee 149, 22761 Hamburg, Germany
| | - P Roedig
- DESY Photon Science, Deutsches Elektronen-Synchrotron (DESY), Notkestraße 85, 22607 Hamburg, Germany
| | - N Stübe
- DESY Photon Science, Deutsches Elektronen-Synchrotron (DESY), Notkestraße 85, 22607 Hamburg, Germany
| | - J Meyer
- DESY Photon Science, Deutsches Elektronen-Synchrotron (DESY), Notkestraße 85, 22607 Hamburg, Germany
| | - A Galler
- European XFEL, Albert-Einstein Ring 19, 22761 Hamburg, Germany
| | - W Gawelda
- European XFEL, Albert-Einstein Ring 19, 22761 Hamburg, Germany
| | - A Britz
- European XFEL, Albert-Einstein Ring 19, 22761 Hamburg, Germany
| | - P Geßler
- European XFEL, Albert-Einstein Ring 19, 22761 Hamburg, Germany
| | - H Sotoudi Namin
- European XFEL, Albert-Einstein Ring 19, 22761 Hamburg, Germany
| | - A Beckmann
- European XFEL, Albert-Einstein Ring 19, 22761 Hamburg, Germany
| | - M Schlie
- Institut für Experimentalphysik, University of Hamburg, Luruper Chaussee 149, 22761 Hamburg, Germany
| | - M Warmer
- DESY Photon Science, Deutsches Elektronen-Synchrotron (DESY), Notkestraße 85, 22607 Hamburg, Germany
| | - M Naumova
- Center for Free-Electron Laser Science (CFEL), Luruper Chaussee 149, 22761 Hamburg, Germany
| | - C Bressler
- European XFEL, Albert-Einstein Ring 19, 22761 Hamburg, Germany
| | - M Rübhausen
- Center for Free-Electron Laser Science (CFEL), Luruper Chaussee 149, 22761 Hamburg, Germany
| | - E Weckert
- DESY Photon Science, Deutsches Elektronen-Synchrotron (DESY), Notkestraße 85, 22607 Hamburg, Germany
| | - A Meents
- DESY Photon Science, Deutsches Elektronen-Synchrotron (DESY), Notkestraße 85, 22607 Hamburg, Germany
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7
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Sun L, Liu B, Cai JR, Lv S, Ye C. Online Measurement of Content in Block Frozen Shrimp by Fusion of X-ray Imaging and Binocular Vision. FOOD ANAL METHOD 2015. [DOI: 10.1007/s12161-015-0132-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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8
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In-situ Characterization of Molecular Processes in Liquids by Ultrafast X-ray Absorption Spectroscopy. IN-SITU MATERIALS CHARACTERIZATION 2014. [DOI: 10.1007/978-3-642-45152-2_1] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
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9
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Borfecchia E, Garino C, Salassa L, Lamberti C. Synchrotron ultrafast techniques for photoactive transition metal complexes. PHILOSOPHICAL TRANSACTIONS. SERIES A, MATHEMATICAL, PHYSICAL, AND ENGINEERING SCIENCES 2013; 371:20120132. [PMID: 23776294 DOI: 10.1098/rsta.2012.0132] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
Abstract
In the last decade, the use of time-resolved X-ray techniques has revealed the structure of light-generated transient species for a wide range of samples, from small organic molecules to proteins. Time resolutions of the order of 100 ps are typically reached, allowing one to monitor thermally equilibrated excited states and capture their structure as a function of time. This review aims at providing a general overview of the application of time-resolved X-ray solution scattering (TR-XSS) and time-resolved X-ray absorption spectroscopy (TR-XAS), the two techniques prevalently employed in the investigation of light-triggered structural changes of transition metal complexes. In particular, we herein describe the fundamental physical principles for static XSS and XAS and illustrate the theory of time-resolved XSS and XAS together with data acquisition and analysis strategies. Selected pioneering examples of photoactive transition metal complexes studied by TR-XSS and TR-XAS are discussed in depth.
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Affiliation(s)
- Elisa Borfecchia
- Department of Chemistry, NIS Centre of Excellence, University of Turin, via P. Giuria 7, 10125 Turin, Italy
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10
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11
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Kjær KS, van Driel TB, Kehres J, Haldrup K, Khakhulin D, Bechgaard K, Cammarata M, Wulff M, Sørensen TJ, Nielsen MM. Introducing a standard method for experimental determination of the solvent response in laser pump, X-ray probe time-resolved wide-angle X-ray scattering experiments on systems in solution. Phys Chem Chem Phys 2013; 15:15003-16. [DOI: 10.1039/c3cp50751c] [Citation(s) in RCA: 52] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
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12
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Stebel L, Malvestuto M, Capogrosso V, Sigalotti P, Ressel B, Bondino F, Magnano E, Cautero G, Parmigiani F. Time-resolved soft x-ray absorption setup using multi-bunch operation modes at synchrotrons. THE REVIEW OF SCIENTIFIC INSTRUMENTS 2011; 82:123109. [PMID: 22225201 DOI: 10.1063/1.3669787] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/19/2023]
Abstract
Here, we report on a novel experimental apparatus for performing time-resolved soft x-ray absorption spectroscopy in the sub-ns time scale using non-hybrid multi-bunch mode synchrotron radiation. The present setup is based on a variable repetition rate Ti:sapphire laser (pump pulse) synchronized with the ~500 MHz x-ray synchrotron radiation bunches and on a detection system that discriminates and singles out the significant x-ray photon pulses by means of a custom made photon counting unit. The whole setup has been validated by measuring the time evolution of the L(3) absorption edge during the melting and the solidification of a Ge single crystal irradiated by an intense ultrafast laser pulse. These results pave the way for performing synchrotron time-resolved experiments in the sub-ns time domain with variable repetition rate exploiting the full flux of the synchrotron radiation.
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Affiliation(s)
- L Stebel
- Sincrotrone Trieste, S.S. 14 km 163.5, Area Science Park, 34149 Basovizza (Ts), Italy
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13
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Pham VT, Penfold TJ, van der Veen RM, Lima F, El Nahhas A, Johnson SL, Beaud P, Abela R, Bressler C, Tavernelli I, Milne CJ, Chergui M. Probing the Transition from Hydrophilic to Hydrophobic Solvation with Atomic Scale Resolution. J Am Chem Soc 2011; 133:12740-8. [DOI: 10.1021/ja203882y] [Citation(s) in RCA: 65] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Affiliation(s)
- Van-Thai Pham
- Ecole Polytechnique Fédérale de Lausanne, Laboratoire de Spectroscopie Ultrarapide, ISIC-FSB, Station 6, CH-1015 Lausanne, Switzerland
| | - Thomas J. Penfold
- Ecole Polytechnique Fédérale de Lausanne, Laboratoire de Spectroscopie Ultrarapide, ISIC-FSB, Station 6, CH-1015 Lausanne, Switzerland
- Swiss Light Source, Paul-Scherrer-Institut, CH-5232 PSI-Villigen, Switzerland
- Ecole Polytechnique Fédérale de Lausanne, Laboratoire de Chimie Et Biochimie Computationnelles, ISIC-FSB, CH-1015 Lausanne, Switzerland
| | - Renske M. van der Veen
- Ecole Polytechnique Fédérale de Lausanne, Laboratoire de Spectroscopie Ultrarapide, ISIC-FSB, Station 6, CH-1015 Lausanne, Switzerland
- Swiss Light Source, Paul-Scherrer-Institut, CH-5232 PSI-Villigen, Switzerland
| | - Frederico Lima
- Ecole Polytechnique Fédérale de Lausanne, Laboratoire de Spectroscopie Ultrarapide, ISIC-FSB, Station 6, CH-1015 Lausanne, Switzerland
| | - Amal El Nahhas
- Ecole Polytechnique Fédérale de Lausanne, Laboratoire de Spectroscopie Ultrarapide, ISIC-FSB, Station 6, CH-1015 Lausanne, Switzerland
| | - Steve L. Johnson
- Swiss Light Source, Paul-Scherrer-Institut, CH-5232 PSI-Villigen, Switzerland
| | - Paul Beaud
- Swiss Light Source, Paul-Scherrer-Institut, CH-5232 PSI-Villigen, Switzerland
| | - Rafael Abela
- Swiss Light Source, Paul-Scherrer-Institut, CH-5232 PSI-Villigen, Switzerland
| | - Christian Bressler
- Ecole Polytechnique Fédérale de Lausanne, Laboratoire de Spectroscopie Ultrarapide, ISIC-FSB, Station 6, CH-1015 Lausanne, Switzerland
| | - Ivano Tavernelli
- Ecole Polytechnique Fédérale de Lausanne, Laboratoire de Chimie Et Biochimie Computationnelles, ISIC-FSB, CH-1015 Lausanne, Switzerland
| | - Christopher J. Milne
- Ecole Polytechnique Fédérale de Lausanne, Laboratoire de Spectroscopie Ultrarapide, ISIC-FSB, Station 6, CH-1015 Lausanne, Switzerland
| | - Majed Chergui
- Ecole Polytechnique Fédérale de Lausanne, Laboratoire de Spectroscopie Ultrarapide, ISIC-FSB, Station 6, CH-1015 Lausanne, Switzerland
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14
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Lima FA, Milne CJ, Amarasinghe DCV, Rittmann-Frank MH, van der Veen RM, Reinhard M, Pham VT, Karlsson S, Johnson SL, Grolimund D, Borca C, Huthwelker T, Janousch M, van Mourik F, Abela R, Chergui M. A high-repetition rate scheme for synchrotron-based picosecond laser pump/x-ray probe experiments on chemical and biological systems in solution. THE REVIEW OF SCIENTIFIC INSTRUMENTS 2011; 82:063111. [PMID: 21721678 DOI: 10.1063/1.3600616] [Citation(s) in RCA: 49] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
Abstract
We present the extension of time-resolved optical pump/x-ray absorption spectroscopy (XAS) probe experiments towards data collection at MHz repetition rates. The use of a high-power picosecond laser operating at an integer fraction of the repetition rate of the storage ring allows exploitation of up to two orders of magnitude more x-ray photons than in previous schemes based on the use of kHz lasers. Consequently, we demonstrate an order of magnitude increase in the signal-to-noise of time-resolved XAS of molecular systems in solution. This makes it possible to investigate highly dilute samples at concentrations approaching physiological conditions for biological systems. The simplicity and compactness of the scheme allows for straightforward implementation at any synchrotron beamline and for a wide range of x-ray probe techniques, such as time-resolved diffraction or x-ray emission studies.
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Affiliation(s)
- Frederico A Lima
- Laboratoire de Spectroscopie Ultrarapide, Ecole Polytechnique Fédérale de Lausanne, ISIC, FSB, 1015 Lausanne, Switzerland
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15
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Ahr B, Chollet M, Adams B, Lunny EM, Laperle CM, Rose-Petruck C. Picosecond X-ray absorption measurements of the ligand substitution dynamics of Fe(CO)5 in ethanol. Phys Chem Chem Phys 2011; 13:5590-9. [DOI: 10.1039/c0cp01856b] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
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16
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The solvent shell structure of aqueous iodide: X-ray absorption spectroscopy and classical, hybrid QM/MM and full quantum molecular dynamics simulations. Chem Phys 2010. [DOI: 10.1016/j.chemphys.2010.03.023] [Citation(s) in RCA: 46] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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17
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Nozawa S, Sato T, Chollet M, Ichiyanagi K, Tomita A, Fujii H, Adachi SI, Koshihara SY. Direct probing of spin state dynamics coupled with electronic and structural modifications by picosecond time-resolved XAFS. J Am Chem Soc 2010; 132:61-3. [PMID: 20014844 DOI: 10.1021/ja907460b] [Citation(s) in RCA: 67] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
The first direct observation of the transient spin-state in a disordered magnetic system with time-resolved XAFS is reported. By observing the evolution of the Fe(II) 1s-3d transition, the spin crossover transition from the (1)A(1) low spin state to (5)T(2) high spin state has been directly observed on a picosecond time scale. Moreover, observation of the transient spin state with time-resolved XAFS allows for the investigation of the variations in the electronic state and molecular structure. This unique experimental technique probes the excited states involved in the ultrafast photoinduced reactions in disordered magnetic systems.
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Affiliation(s)
- Shunsuke Nozawa
- ERATO, Japan Science and Technology Agency, 1-1 Oho, Tsukuba, Ibaraki 305-0801, Japan.
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18
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Bressler C, Chergui M. Molecular Structural Dynamics Probed by Ultrafast X-Ray Absorption Spectroscopy. Annu Rev Phys Chem 2010; 61:263-82. [DOI: 10.1146/annurev.physchem.012809.103353] [Citation(s) in RCA: 136] [Impact Index Per Article: 9.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
| | - Majed Chergui
- Ecole Polytechnique Fédérale de Lausanne, Laboratoire de Spectroscopie Ultrarapide, ISIC, Faculté des Sciences de Base, Station 6, CH-1015 Lausanne, Switzerland;
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19
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Chergui M. Picosecond and femtosecond X-ray absorption spectroscopy of molecular systems. Acta Crystallogr A 2010; 66:229-39. [DOI: 10.1107/s010876730904968x] [Citation(s) in RCA: 58] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/20/2009] [Accepted: 11/19/2009] [Indexed: 11/10/2022] Open
Abstract
The need to visualize molecular structure in the course of a chemical reaction, a phase transformation or a biological function has been a dream of scientists for decades. The development of time-resolved X-ray and electron-based methods is making this true. X-ray absorption spectroscopy is ideal for the study of structural dynamics in liquids, because it can be implemented in amorphous media. Furthermore, it is chemically selective. Using X-ray absorption near-edge structure (XANES) and extended X-ray absorption fine structure (EXAFS) in laser pump/X-ray probe experiments allows the retrieval of the local geometric structure of the system under study, but also the underlying photoinduced electronic structure changes that drive the structural dynamics. Recent developments in picosecond and femtosecond X-ray absorption spectroscopy applied to molecular systems in solution are reviewed: examples on ultrafast photoinduced processes such as intramolecular electron transfer, low-to-high spin change, and bond formation are presented.
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20
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Bressler C, Abela R, Chergui M. Exploiting EXAFS and XANES for time-resolved molecular structures in liquids. ACTA ACUST UNITED AC 2009. [DOI: 10.1524/zkri.2008.0030] [Citation(s) in RCA: 67] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
Abstract
Abstract
Time-resolved X-ray absorption fine structure (XAFS) spectroscopy with picosecond temporal resolution is a new method to observe electronic and geometric structures of short-lived reaction intermediates. It combines an intense femtosecond laser source synchronized to the X-ray pulses delivered by a synchrotron Swiss light source (SLS). We present key experiments on charge transfer reactions as well as spin-crossover processes in coordination chemistry compounds next to solvation dynamics studies of photogenerated atomic radicals. These examples emphasize the observables at hand using ultrafast XAFS techniques, which include the density of states, full and even partial changes in oxidation state, and internuclear distances with milli-Angström accuracy. An outlook towards femtosecond studies and biologically relevant systems stresses the high potential of XAFS methods using new femtosecond X-ray sources like free electron lasers (XFELs).
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21
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Bare SR, Ressler T. Chapter 6 Characterization of Catalysts in Reactive Atmospheres by X‐ray Absorption Spectroscopy. ADVANCES IN CATALYSIS 2009. [DOI: 10.1016/s0360-0564(08)00006-0] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
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22
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Fischer MK, Laubereau A, Iglev H. Femtosecond electron detachment of aqueous bromide studied by two and three pulse spectroscopy. Phys Chem Chem Phys 2009; 11:10939-44. [DOI: 10.1039/b913688f] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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23
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Affiliation(s)
- Xiyi Chen
- Department of Chemistry, University of Southern California, Los Angeles, California 90089-0482;
| | - Stephen E. Bradforth
- Department of Chemistry, University of Southern California, Los Angeles, California 90089-0482;
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24
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Elles CG, Shkrob IA, Crowell RA, Arms DA, Landahl EC. Transient x-ray absorption spectroscopy of hydrated halogen atom. J Chem Phys 2008; 128:061102. [DOI: 10.1063/1.2827456] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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25
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Pham VT, Gawelda W, Zaushitsyn Y, Kaiser M, Grolimund D, Johnson SL, Abela R, Bressler C, Chergui M. Observation of the Solvent Shell Reorganization around Photoexcited Atomic Solutes by Picosecond X-ray Absorption Spectroscopy. J Am Chem Soc 2007; 129:1530-1. [PMID: 17283997 DOI: 10.1021/ja068466q] [Citation(s) in RCA: 37] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Van-Thai Pham
- Laboratoire de Spectroscopie Ultrarapide, Faculté des Sciences de Base, Ecole Polytechnique Fédérale de Lausanne, ISIC-BSP, CH-1015 Lausanne-Dorigny, Switzerland
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26
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Lee T, Jiang Y, Rose-Petruck CG, Benesch F. Ultrafast tabletop laser-pump-x-ray probe measurement of solvated Fe(CN)6 4-. J Chem Phys 2006; 122:84506. [PMID: 15836062 DOI: 10.1063/1.1852455] [Citation(s) in RCA: 51] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022] Open
Abstract
We report on the first ultrafast laser-pump-picosecond x-ray probe measurements of solvated transition metal complexes carried out with a tabletop ultrafast laser-driven plasma x-ray source. The x-ray absorption fine structure (XAFS) spectra of Fe(CN)(6) (4-) solvated in water have been measured before and tens of picoseconds after photoexcitation with ultrashort UV laser pulses. The XAFS spectra after photoexcitation exhibits a K-edge shift indicating the increase of the iron-ligand distances. Reference spectra of Fe(CN)(6) (4-) and Fe(CN)(6) (3-) measured at a synchrotron source yield structural data that show static solvation-induced bond length changes of the metal complexes.
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Affiliation(s)
- Taewoo Lee
- Department of Chemistry, P.O. Box H, Brown University, Providence, Rhode Island 02912
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27
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Pandey RK, Mukamel S. Simulation of x-ray absorption near-edge spectra and x-ray fluorescence spectra of optically excited molecules. J Chem Phys 2006; 124:94106. [PMID: 16526844 DOI: 10.1063/1.2173243] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023] Open
Abstract
The x-ray absorption near-edge spectra (XANES) and fluorescence spectra of molecules in the ground state and optically excited states are computed using time-dependent density functional theory and time-dependent Hartree-Fock theory. The calculated XANES spectra of optically excited methanol, benzonitrile, hydrogen sulphide, and titanium tetrachloride and the fluorescence spectra of optically excited methanol can be used to simulate ultrafast optical pump/x-ray probe experiments.
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Affiliation(s)
- R K Pandey
- Department of Chemistry, University of California, Irvine, California 92697-2025, USA
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28
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Khalil M, Marcus MA, Smeigh AL, McCusker JK, Chong HHW, Schoenlein RW. Picosecond X-ray Absorption Spectroscopy of a Photoinduced Iron(II) Spin Crossover Reaction in Solution. J Phys Chem A 2005; 110:38-44. [PMID: 16392837 DOI: 10.1021/jp055002q] [Citation(s) in RCA: 154] [Impact Index Per Article: 8.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Abstract
In this study, we perform steady-state and time-resolved X-ray absorption spectroscopy (XAS) on the iron K-edge of [Fe(tren(py)3)](PF6)2 dissolved in acetonitrile solution. Static XAS measurements on the low-spin parent compound and its high-spin analogue, [Fe(tren(6-Me-py)3)](PF6)2, reveal distinct spectroscopic signatures for the two spin states in the X-ray absorption near-edge structure (XANES) and in the X-ray absorption fine structure (EXAFS). For the time-resolved studies, 100 fs, 400 nm pump pulses initiate a charge-transfer transition in the low-spin complex. The subsequent electronic and geometric changes associated with the formation of the high-spin excited state are probed with 70 ps, 7.1 keV, tunable X-ray pulses derived from the Advanced Light Source (ALS). Modeling of the transient XAS data reveals that the average iron-nitrogen (Fe-N) bond is lengthened by 0.21+/-0.03 A in the high-spin excited state relative to the ground state within 70 ps. This structural modification causes a change in the metal-ligand interactions as reflected by the altered density of states of the unoccupied metal orbitals. Our results constitute the first direct measurements of the dynamic atomic and electronic structural rearrangements occurring during a photoinduced FeII spin crossover reaction in solution via picosecond X-ray absorption spectroscopy.
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Affiliation(s)
- Munira Khalil
- Department of Chemistry, University of California, and Materials Sciences Division and Advanced Light Source, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA.
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29
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Chen LX. PROBING TRANSIENT MOLECULAR STRUCTURES IN PHOTOCHEMICAL PROCESSES USING LASER-INITIATED TIME-RESOLVED X-RAY ABSORPTION SPECTROSCOPY. Annu Rev Phys Chem 2005; 56:221-54. [PMID: 15796701 DOI: 10.1146/annurev.physchem.56.092503.141310] [Citation(s) in RCA: 155] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
Molecular structures during chemical processes are crucial for predicting molecular reactivity and reaction mechanisms. Using a laser pulse as an internal clock for starting fundamental chemical processes, molecular structural dynamics can be characterized by coherent vibrational motions and by incoherent transitions between different intermediate states. Recent developments in pulsed X-ray facilities allow structural determination of discrete excited states and reaction intermediates using laser-initiated time-resolved X-ray absorption spectroscopy (LITR-XAS). Moreover, femtosecond X-ray sources have begun making significant contributions in monitoring coherent molecular motions. This review summarizes recent developments in the field, including technical and scientific challenges as well as several examples involving excited state molecular structure and electronic configuration determinations. Future applications of this technique with high time resolution will enable visualization of fundamental chemical events in many systems and further our understanding in photochemistry.
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Affiliation(s)
- Lin X Chen
- Chemistry Division, Argonne National Laboratory, Argonne, Illinois 60439, USA.
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30
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Iglev H, Trifonov A, Thaller A, Buchvarov I, Fiebig T, Laubereau A. Photoionization dynamics of an aqueous iodide solution: the temperature dependence. Chem Phys Lett 2005. [DOI: 10.1016/j.cplett.2005.01.014] [Citation(s) in RCA: 40] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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31
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Crowell RA, Lian R, Shkrob IA, Bartels DM, Chen X, Bradforth SE. Ultrafast dynamics for electron photodetachment from aqueous hydroxide. J Chem Phys 2004; 120:11712-25. [PMID: 15268207 DOI: 10.1063/1.1739213] [Citation(s) in RCA: 53] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Charge-transfer-to-solvent reactions of hydroxide induced by 200 nm monophotonic or 337 and 389 nm biphotonic excitation of this anion in aqueous solution have been studied by means of pump-probe ultrafast laser spectroscopy. Transient absorption kinetics of the hydrated electron, e(aq) (-), have been observed, from a few hundred femtoseconds out to 600 ps, and studied as function of hydroxide concentration and temperature. The geminate decay kinetics are bimodal, with a fast exponential component ( approximately 13 ps) and a slower power "tail" due to the diffusional escape of the electrons. For the biphotonic excitation, the extrapolated fraction of escaped electrons is 1.8 times higher than for the monophotonic 200 nm excitation (31% versus 17.5% at 25 degrees C, respectively), due to the broadening of the electron distribution. The biphotonic electron detachment is very inefficient; the corresponding absorption coefficient at 400 nm is <4 cm TW(-1) M(-1) (assuming unity quantum efficiency for the photodetachment). For [OH(-)] between 10 mM and 10 M, almost no concentration dependence of the time profiles of solvated electron kinetics was observed. At higher temperature, the escape fraction of the electrons increases with a slope of 3x10(-3) K(-1) and the recombination and diffusion-controlled dissociation of the close pairs become faster. Activation energies of 8.3 and 22.3 kJ/mol for these two processes were obtained. The semianalytical theory of Shushin for diffusion controlled reactions in the central force field was used to model the geminate dynamics. The implications of these results for photoionization of water are discussed.
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Affiliation(s)
- Robert A Crowell
- Chemistry Division, Argonne National Laboratory, Argonne, Illinois 60439, USA.
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32
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Affiliation(s)
- Christian Bressler
- Laboratoire de Spectroscopie Ultrarapide, ISIC-FSB-BSP, Ecole Polytechnique Fédérale de Lausanne, CH-1015 Lausanne, Switzerland
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33
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Affiliation(s)
- Imre Szalóki
- Institute of Experimental Physics, University of Debrecen, Bem tér 18/a, H-4026 Debrecen, Hungary
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34
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35
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Hatanaka K, Miura T, Fukumura H. White X-ray pulse emission of alkali halide aqueous solutions irradiated by focused femtosecond laser pulses: a spectroscopic study on electron temperatures as functions of laser intensity, solute concentration, and solute atomic number. Chem Phys 2004. [DOI: 10.1016/j.chemphys.2003.10.036] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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36
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Chen LX, Shaw GB, Liu T, Jennings G, Attenkofer K. Exciplex formation of copper(II) octaethylporphyrin revealed by pulsed X-rays. Chem Phys 2004. [DOI: 10.1016/j.chemphys.2003.12.004] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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37
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38
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Glasbeek M, Zhang H. Femtosecond Studies of Solvation and Intramolecular Configurational Dynamics of Fluorophores in Liquid Solution. Chem Rev 2004; 104:1929-54. [PMID: 15080717 DOI: 10.1021/cr0206723] [Citation(s) in RCA: 214] [Impact Index Per Article: 10.7] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Affiliation(s)
- Max Glasbeek
- Laboratory for Physical Chemistry, University of Amsterdam, Nieuwe Achtergracht 129, 1018 WS Amsterdam, The Netherlands.
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39
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Tanida H, Kato KI, Watanabe I. Hydrogen Atom Position in Hydrated Iodide Anion from X-ray Absorption Near Edge Structure. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 2003. [DOI: 10.1246/bcsj.76.1735] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
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40
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Saes M, Gawelda W, Kaiser M, Tarnovsky A, Bressler C, Chergui M, Johnson SL, Grolimund D, Abela R. Ultrafast time‐resolved X‐ray absorption spectroscopy of chemical systems. ACTA ACUST UNITED AC 2003. [DOI: 10.1080/08940880308603029] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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41
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Tanaka S, Volkov S, Mukamel S. Time-resolved x-ray Raman spectroscopy of photoexcited polydiacetylene oligomer: A simulation study. J Chem Phys 2003. [DOI: 10.1063/1.1533014] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022] Open
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42
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Saes M, Bressler C, Abela R, Grolimund D, Johnson SL, Heimann PA, Chergui M. Observing photochemical transients by ultrafast x-ray absorption spectroscopy. PHYSICAL REVIEW LETTERS 2003; 90:047403. [PMID: 12570459 DOI: 10.1103/physrevlett.90.047403] [Citation(s) in RCA: 103] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/18/2002] [Indexed: 05/24/2023]
Abstract
Accurate determination of the transient electronic structures, which drive photochemical reactions, is crucial in chemistry and biology. We report the detection of transient chemical changes on the picosecond time scale by x-ray-absorption near-edge structure of photoexcited aqueous [Ru(bpy)(3)](2+). Upon ultrashort laser pulse excitation a charge transfer excited state having a 300 ns lifetime is formed. We detect the change of oxidation state of the central Ru atom at its L3 and L2 edges, at a temporal resolution of 100 ps with the zero of time unambiguously determined.
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Affiliation(s)
- Melanie Saes
- Institut de Physique de la Matière Condensée, Université de Lausanne, BSP, CH-1015 Lausanne, Switzerland
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