Self-consistent density matrix algorithm for electronic structure and excitations of molecules and aggregates

The configuration effect on the exciton dynamics of zinc chlorin aggregates

Excitonic energy transfer among the zinc chlorin molecules is significant for the photovoltaic process because of their high sensitivities to harvesting sunlight. Zinc chlorin monomers and dimers can be synthesized experimentally, and they can form various self-assembled structures. Using the realistic parameters of zinc chlorin molecules, we assume that 20 molecules with J-, H- or J-H aggregation are arranged in a line and we investigate their dipole configuration effect on exciton dynamics. The expectation value approximation of operators is applied to derive the equations of motion of multi-exciton states. The temporal evolution of multi-exciton states is analyzed in the scheme of density matrix theory. Our simulations show that the inter-molecular coupling results in an exciton band and the wave-packet progressing excited by the resonant laser pulse exhibits attractive or repulsive behavior at the exciton level due to the dipole configuration effect. In the defined J-H coupling, the coherent wave-packet cannot overcome the configuration barrier to the no-excited part. The exciton dynamics revealed here might be helpful to better understand the energy transfer process in organic photovoltaic devices.

One-particle density matrix polarization susceptibility tensors

The electric field-induced change in the one-electron density has been expressed as a series of the one-particle density matrix susceptibilities interacting with the spatial distribution of the electric field. The analytic approximate expressions are derived at the Hartree-Fock theory, which serves as a basis for the construction of the generalized model that is designed for an arbitrary form of wavefunction and any type of one-particle density matrix. It is shown that it is possible to accurately predict the changes in the one-electron ground-state density of water molecule in a spatially uniform electric field, as well as in spatially non-uniform electric field distribution generated by point charges. When both linear and quadratic terms with respect to the electric field are accounted for, the electric field-induced polarization energies, dipole moments, and quadrupole moments are quantitatively described by the present theory in electric fields ranging from weak to very strong (0.001-0.07 a.u.). It is believed that the proposed model could open new routes in quantum chemistry for fast and efficient calculations of molecular properties in condensed phases.

Multidimensional optical spectroscopy of a single molecule in a current-carrying state

The nonlinear optical signals from an open system consisting of a molecule connected to metallic leads, in response to a sequence of impulsive pulses, are calculated using a superoperator formalism. Two detection schemes are considered: coherent stimulated emission and incoherent fluorescence. The two provide similar but not identical information. The necessary superoperator correlation functions are evaluated either by converting them to ordinary (Hilbert space) operators which are then expanded in many-body states, or by using Wick's theorem for superoperators to factorize them into nonequilibrium two point Green's functions. As an example we discuss a stimulated Raman process that shows resonances involving two different charge states of the molecule in the same signal.

Vibrational-exciton couplings for the amide I, II, III, and A modes of peptides

The couplings between all amide fundamentals and their overtones and combination vibrational states are calculated. Combined with the level energies reported previously (Hayashi, T.; Zhuang, W.; Mukamel, S. J. Phys. Chem. A 2005, 109, 9747), we obtain a complete effective vibrational Hamiltonian for the entire amide system. Couplings between neighboring peptide units are obtained using the anharmonic vibrational Hamiltonian of glycine dipeptide (GLDP) at the BPW91/6-31G(d,p) level. Electrostatic couplings between non-neighboring units are calculated by the fourth rank transition multipole coupling (TMC) expansion, including 1/R3 (dipole-dipole), 1/R4 (quadrupole-dipole), and 1/R5 (quadrupole-quadrupole and octapole-dipole) interactions. Exciton delocalization length and its variation with frequency in the various amide bands are calculated. The simulated infrared amide I and II absorptions and CD spectra of 24 residue alpha-helical motifs (SPE3) are in good agreement with experiment.

2-Benzyl-2-methyl-2H-benzimidazole 1,3-dioxide derivatives: Spectroscopic and theoretical study

The spectroscopic behavior of 2-benzyl-2-methyl-2H-benzimidazole 1,3-dioxide derivatives in solution was studied in terms of electronic and nuclear magnetic resonance ((1)H and (13)C NMR) techniques. The experimental spectra were compared to the theoretical ones, obtained at DFT level, proving that the compounds adopt in solution a bird-like conformational distribution. Also, theoretically this conformational distribution resulted the most stable in gas phase. Infrared spectroscopy was used to study solid state behavior identifying experimentally the N-O stretching near to 1380, 1365 and 1225 cm(-1) and the vibrational benzimidazole skeleton near to 1610 and 1590 cm(-1). The vibrational spectrum was satisfactorily described by DFT calculations funding the N-O stretching as a coupled vibration near to 1470, 1350 and 1285 cm(-1). The fragmentation that takes place in mass spectrometry was assigned for all of the new derivatives.