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Shao K, Logothetis NK, Besserve M. Information theoretic measures of causal influences during transient neural events. FRONTIERS IN NETWORK PHYSIOLOGY 2023; 3:1085347. [PMID: 37323237 PMCID: PMC10266490 DOI: 10.3389/fnetp.2023.1085347] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/31/2022] [Accepted: 05/11/2023] [Indexed: 06/17/2023]
Abstract
Introduction: Transient phenomena play a key role in coordinating brain activity at multiple scales, however their underlying mechanisms remain largely unknown. A key challenge for neural data science is thus to characterize the network interactions at play during these events. Methods: Using the formalism of Structural Causal Models and their graphical representation, we investigate the theoretical and empirical properties of Information Theory based causal strength measures in the context of recurring spontaneous transient events. Results: After showing the limitations of Transfer Entropy and Dynamic Causal Strength in this setting, we introduce a novel measure, relative Dynamic Causal Strength, and provide theoretical and empirical support for its benefits. Discussion: These methods are applied to simulated and experimentally recorded neural time series and provide results in agreement with our current understanding of the underlying brain circuits.
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Affiliation(s)
- Kaidi Shao
- International Center for Primate Brain Research (ICPBR), Center for Excellence in Brain Science and Intelligence Technology (CEBSIT), Chinese Academy of Sciences (CAS), Shanghai, China
- Department of Cognitive Neurophysiology, Max Planck Institute for Biological Cybernetics, Tübingen, Germany
- Graduate School of Neural and Behavioral Sciences, International Max Planck Research School, Eberhard-Karls University of Tübingen, Tübingen, Germany
| | - Nikos K. Logothetis
- International Center for Primate Brain Research (ICPBR), Center for Excellence in Brain Science and Intelligence Technology (CEBSIT), Chinese Academy of Sciences (CAS), Shanghai, China
- Department of Cognitive Neurophysiology, Max Planck Institute for Biological Cybernetics, Tübingen, Germany
- Centre for Imaging Sciences, Biomedical Imaging Institute, The University of Manchester, Manchester, United Kingdom
| | - Michel Besserve
- Department of Cognitive Neurophysiology, Max Planck Institute for Biological Cybernetics, Tübingen, Germany
- Department of Empirical Inference, Max Planck Institute for Intelligent Systems, Tübingen, Germany
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Liu W, Lei X, Chen J. Effects of periodically modulated coupling on amplitude death in nonidentical oscillators. ACTA ACUST UNITED AC 2019. [DOI: 10.1209/0295-5075/125/50004] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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Li S, Sun N, Chen L, Wang X. Network synchronization with periodic coupling. Phys Rev E 2018; 98:012304. [PMID: 30110862 DOI: 10.1103/physreve.98.012304] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2018] [Indexed: 06/08/2023]
Abstract
The synchronization behavior of networked chaotic oscillators with periodic coupling is investigated. It is observed in simulations that the network synchronizability could be significantly influenced by tuning the coupling frequency, even making the network alternating between the synchronous and nonsynchronous states. Using the master stability function method, we conduct a detailed analysis of the influence of coupling frequency on network synchronizability and find that the network synchronizability is maximized at some characteristic frequencies comparable to the intrinsic frequency of the local dynamics. Moreover, it is found that as the amplitude of the coupling increases, the characteristic frequencies are gradually decreased. Using the finite-time Lyapunov exponent technique, we investigate further the mechanism for the maximized synchronizability and find that at the characteristic frequencies the power spectrum of the finite-time Lyapunov exponent is abruptly changed from the localized to broad distributions. When this feature is absent or not prominent, the network synchronizability is less influenced by the periodic coupling. Our study shows the efficiency of finite-time Lyapunov exponent in exploring the synchronization behavior of temporally coupled oscillators and sheds lights on the interplay between the system dynamics and structure in general temporal networks.
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Affiliation(s)
- Sansan Li
- School of Physics and Information Technology, Shaanxi Normal University, Xi'an 710062, China
| | - Na Sun
- School of Physics and Information Technology, Shaanxi Normal University, Xi'an 710062, China
| | - Li Chen
- School of Physics and Information Technology, Shaanxi Normal University, Xi'an 710062, China
| | - Xingang Wang
- School of Physics and Information Technology, Shaanxi Normal University, Xi'an 710062, China
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Botha AE. Characteristic distribution of finite-time Lyapunov exponents for chimera states. Sci Rep 2016; 6:29213. [PMID: 27374473 PMCID: PMC4931592 DOI: 10.1038/srep29213] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2016] [Accepted: 06/13/2016] [Indexed: 11/30/2022] Open
Abstract
Our fascination with chimera states stems partially from the somewhat paradoxical, yet fundamental trait of identical, and identically coupled, oscillators to split into spatially separated, coherently and incoherently oscillating groups. While the list of systems for which various types of chimeras have already been detected continues to grow, there is a corresponding increase in the number of mathematical analyses aimed at elucidating the fundamental reasons for this surprising behaviour. Based on the model systems, there are strong indications that chimera states may generally be ubiquitous in naturally occurring systems containing large numbers of coupled oscillators - certain biological systems and high-Tc superconducting materials, for example. In this work we suggest a new way of detecting and characterising chimera states. Specifically, it is shown that the probability densities of finite-time Lyapunov exponents, corresponding to chimera states, have a definite characteristic shape. Such distributions could be used as signatures of chimera states, particularly in systems for which the phases of all the oscillators cannot be measured directly. For such cases, we suggest that chimera states could perhaps be detected by reconstructing the characteristic distribution via standard embedding techniques, thus making it possible to detect chimera states in systems where they could otherwise exist unnoticed.
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Affiliation(s)
- André E. Botha
- Department of Physics, University of South Africa, Science Campus, Private Bag X6, Florida 1710, South Africa
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Baptista MS, Szmoski RM, Pereira RF, Pinto SEDS. Chaotic, informational and synchronous behaviour of multiplex networks. Sci Rep 2016; 6:22617. [PMID: 26939580 PMCID: PMC4778120 DOI: 10.1038/srep22617] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/19/2015] [Accepted: 02/17/2016] [Indexed: 01/21/2023] Open
Abstract
The understanding of the relationship between topology and behaviour in interconnected networks would allow to charac- terise and predict behaviour in many real complex networks since both are usually not simultaneously known. Most previous studies have focused on the relationship between topology and synchronisation. In this work, we provide analytical formulas that shows how topology drives complex behaviour: chaos, information, and weak or strong synchronisation; in multiplex net- works with constant Jacobian. We also study this relationship numerically in multiplex networks of Hindmarsh-Rose neurons. Whereas behaviour in the analytically tractable network is a direct but not trivial consequence of the spectra of eigenvalues of the Laplacian matrix, where behaviour may strongly depend on the break of symmetry in the topology of interconnections, in Hindmarsh-Rose neural networks the nonlinear nature of the chemical synapses breaks the elegant mathematical connec- tion between the spectra of eigenvalues of the Laplacian matrix and the behaviour of the network, creating networks whose behaviour strongly depends on the nature (chemical or electrical) of the inter synapses.
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Affiliation(s)
- M. S. Baptista
- Institute for Complex Systems and Mathematical Biology, SUPA, University of Aberdeen, Aberdeen, United Kingdom
| | - R. M. Szmoski
- Department of Physics, Federal University of Technology - Paraná, 84016-210, Ponta Grossa, Paraná, Brazil
| | - R. F. Pereira
- Department of Mathematics, Federal University of Technology - Paraná, 84016-210, Ponta Grossa, Paraná, Brazil
| | - S. E. de Souza Pinto
- Departamento de Física, Universidade Estadual de Ponta Grossa, 84030-900, Paraná, Brazil
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Schmitzer B, Kinzel W, Kanter I. Pulses of chaos synchronization in coupled map chains with delayed transmission. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2009; 80:047203. [PMID: 19905486 DOI: 10.1103/physreve.80.047203] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/17/2009] [Indexed: 05/28/2023]
Abstract
Pulses of synchronization in chaotic coupled map lattices are discussed in the context of transmission of information. Synchronization and desynchronization propagate along the chain with different velocities which are calculated analytically from the spectrum of convective Lyapunov exponents. Since the front of synchronization travels slower than the front of desynchronization, the maximal possible chain length for which information can be transmitted by modulating the first unit of the chain is bounded.
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Affiliation(s)
- Bernhard Schmitzer
- Institute for Theoretical Physics, University of Würzburg, Würzburg, Germany
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Yang HL, Radons G. Lyapunov instabilities of Lennard-Jones fluids. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2005; 71:036211. [PMID: 15903550 DOI: 10.1103/physreve.71.036211] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/19/2004] [Revised: 11/16/2004] [Indexed: 05/02/2023]
Abstract
Recent work on many-particle systems reveals the existence of regular collective perturbations corresponding to the smallest positive Lyapunov exponents (LEs), called hydrodynamic Lyapunov modes. Until now, however, these modes have been found only for hard-core systems. Here we report results on Lyapunov spectra and Lyapunov vectors (LVs) for Lennard-Jones fluids. By considering the Fourier transform of the coordinate fluctuation density u((alpha)) (x,t) , it is found that the LVs with lambda approximately equal to 0 are highly dominated by a few components with low wave numbers. These numerical results provide strong evidence that hydrodynamic Lyapunov modes do exist in soft-potential systems, although the collective Lyapunov modes are more vague than in hard-core systems. In studying the density and temperature dependence of these modes, it is found that, when the value of the Lyapunov exponent lambda((alpha)) is plotted as function of the dominant wave number k(max) of the corresponding LV, all data from simulations with different densities and temperatures collapse onto a single curve. This shows that the dispersion relation lambda((alpha)) vs k(max) for hydrodynamical Lyapunov modes appears to be universal for the low-density cases studied here. Despite the wavelike character of the LVs, no steplike structure exists in the Lyapunov spectrum of the systems studied here, in contrast to the hard-core case. Further numerical simulations show that the finite-time LEs fluctuate strongly. We have also investigated localization features of LVs and propose a length scale to characterize the Hamiltonian spatiotemporal chaotic states.
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Affiliation(s)
- Hong-liu Yang
- Institute of Physics, Chemnitz University of Technology, D-09107 Chemnitz, Germany.
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Cencini M, Torcini A. Linear and nonlinear information flow in spatially extended systems. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2001; 63:056201. [PMID: 11414984 DOI: 10.1103/physreve.63.056201] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/23/2000] [Indexed: 05/23/2023]
Abstract
Infinitesimal and finite amplitude error propagation in spatially extended systems are numerically and theoretically investigated. The information transport in these systems can be characterized in terms of the propagation velocity of perturbations Vp. A linear stability analysis is sufficient to capture all the relevant aspects associated to propagation of infinitesimal disturbances. In particular, this analysis gives the propagation velocity VL of infinitesimal errors. If linear mechanisms prevail on the nonlinear ones Vp=VL. On the contrary, if nonlinear effects are predominant finite amplitude disturbances can eventually propagate faster than infinitesimal ones (i.e., Vp>VL). The finite size Lyapunov exponent can be successfully employed to discriminate the linear or nonlinear origin of information flow. A generalization of the finite size Lyapunov exponent to a comoving reference frame allows us to state a marginal stability criterion able to provide Vp both in the linear and in the nonlinear case. Strong analogies are found between information spreading and propagation of fronts connecting steady states in reaction-diffusion systems. The analysis of the common characteristics of these two phenomena leads to a better understanding of the role played by linear and nonlinear mechanisms for the flow of information in spatially extended systems.
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Affiliation(s)
- M Cencini
- Max-Planck-Institut für Physik Komplexer Systeme, Nöthnitzer Strasse 38, D-01187 Dresden, Germany
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Aurell E, Boffetta G, Crisanti A, Paladin G, Vulpiani A. Predictability in the large: an extension of the concept of Lyapunov exponent. ACTA ACUST UNITED AC 1999. [DOI: 10.1088/0305-4470/30/1/003] [Citation(s) in RCA: 231] [Impact Index Per Article: 9.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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Rudzick O, Pikovsky A. Unidirectionally coupled map lattice as a model for open flow systems. PHYSICAL REVIEW. E, STATISTICAL PHYSICS, PLASMAS, FLUIDS, AND RELATED INTERDISCIPLINARY TOPICS 1996; 54:5107-5115. [PMID: 9965690 DOI: 10.1103/physreve.54.5107] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
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Aurell E, Boffetta G, Crisanti A, Paladin G, Vulpiani A. Predictability in systems with many characteristic times: The case of turbulence. PHYSICAL REVIEW. E, STATISTICAL PHYSICS, PLASMAS, FLUIDS, AND RELATED INTERDISCIPLINARY TOPICS 1996; 53:2337-2349. [PMID: 9964518 DOI: 10.1103/physreve.53.2337] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
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Pikovsky AS, Kurths J. Roughening interfaces in the dynamics of perturbations of spatiotemporal chaos. PHYSICAL REVIEW. E, STATISTICAL PHYSICS, PLASMAS, FLUIDS, AND RELATED INTERDISCIPLINARY TOPICS 1994; 49:898-901. [PMID: 9961283 DOI: 10.1103/physreve.49.898] [Citation(s) in RCA: 31] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
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