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For: Hanna G, Kapral R. Quantum-classical Liouville dynamics of nonadiabatic proton transfer. J Chem Phys 2005;122:244505. [PMID: 16035780 DOI: 10.1063/1.1940051] [Citation(s) in RCA: 98] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]  Open
Number Cited by Other Article(s)
1
Limbu DK, Shakib FA. Real-Time Dynamics and Detailed Balance in Ring Polymer Surface Hopping: The Impact of Frustrated Hops. J Phys Chem Lett 2023;14:8658-8666. [PMID: 37732811 DOI: 10.1021/acs.jpclett.3c02085] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/22/2023]
2
DECIDE: A Deterministic Mixed Quantum-Classical Dynamics Approach. APPLIED SCIENCES-BASEL 2022. [DOI: 10.3390/app12147022] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
3
Mandal A, Li X, Huo P. Theory of vibrational polariton chemistry in the collective coupling regime. J Chem Phys 2022;156:014101. [PMID: 34998324 DOI: 10.1063/5.0074106] [Citation(s) in RCA: 25] [Impact Index Per Article: 12.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]  Open
4
Brown SE, Shakib FA. Recent progress in approximate quantum dynamics methods for the study of proton-coupled electron transfer reactions. Phys Chem Chem Phys 2021;23:2535-2556. [PMID: 33367437 DOI: 10.1039/d0cp05166g] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
5
Wang F, Makri N. Quantum-classical path integral with a harmonic treatment of the back-reaction. J Chem Phys 2019;150:184102. [DOI: 10.1063/1.5091725] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
6
Ikeda T, Tanimura Y. Phase-space wavepacket dynamics of internal conversion via conical intersection: Multi-state quantum Fokker-Planck equation approach. Chem Phys 2018. [DOI: 10.1016/j.chemphys.2018.07.013] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
7
Quasi-Lie Brackets and the Breaking of Time-Translation Symmetry for Quantum Systems Embedded in Classical Baths. Symmetry (Basel) 2018. [DOI: 10.3390/sym10100518] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]  Open
8
Liu J, Hanna G. Efficient and Deterministic Propagation of Mixed Quantum-Classical Liouville Dynamics. J Phys Chem Lett 2018;9:3928-3933. [PMID: 29947224 DOI: 10.1021/acs.jpclett.8b01619] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
9
Zauleck JPP, Peschel MT, Rott F, Thallmair S, de Vivie-Riedle R. Ultrafast Reactive Quantum Dynamics Coupled to Classical Solvent Dynamics Using an Ehrenfest Approach. J Phys Chem A 2018;122:2849-2857. [PMID: 29498853 DOI: 10.1021/acs.jpca.7b10372] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
10
Kananenka AA, Sun X, Schubert A, Dunietz BD, Geva E. A comparative study of different methods for calculating electronic transition rates. J Chem Phys 2018;148:102304. [DOI: 10.1063/1.4989509] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
11
Xu Y, Song K, Shi Q. Mixed quantum-classical simulation of the hydride transfer reaction catalyzed by dihydrofolate reductase based on a mapped system-harmonic bath model. J Chem Phys 2018;148:102322. [DOI: 10.1063/1.4990515] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
12
Dell’Angelo D, Hanna G. On the performance of multi-state transition filtering in mixed quantum-classical Liouville surface-hopping simulations: beyond two- and three-state quantum subsystems. Theor Chem Acc 2018. [DOI: 10.1007/s00214-017-2194-8] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
13
Importance of eigenvector sign consistency in computations of expectation values via mixed quantum-classical surface-hopping dynamics. Theor Chem Acc 2017. [DOI: 10.1007/s00214-017-2105-z] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
14
Kananenka AA, Hsieh CY, Cao J, Geva E. Accurate Long-Time Mixed Quantum-Classical Liouville Dynamics via the Transfer Tensor Method. J Phys Chem Lett 2016;7:4809-4814. [PMID: 27934045 DOI: 10.1021/acs.jpclett.6b02389] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
15
Kapral R. Surface hopping from the perspective of quantum–classical Liouville dynamics. Chem Phys 2016. [DOI: 10.1016/j.chemphys.2016.05.016] [Citation(s) in RCA: 42] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
16
Lu J, Zhou Z. Improved sampling and validation of frozen Gaussian approximation with surface hopping algorithm for nonadiabatic dynamics. J Chem Phys 2016;145:124109. [DOI: 10.1063/1.4963107] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
17
Freedman H, Hanna G. Mixed quantum–classical Liouville simulation of vibrational energy transfer in a model α-helix at 300 K. Chem Phys 2016. [DOI: 10.1016/j.chemphys.2016.08.015] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
18
Sherman MC, Corcelli SA. Nonadiabatic transition path sampling. J Chem Phys 2016;145:034110. [DOI: 10.1063/1.4959038] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
19
Shakib F, Hanna G. Mixed Quantum-Classical Liouville Approach for Calculating Proton-Coupled Electron-Transfer Rate Constants. J Chem Theory Comput 2016;12:3020-9. [DOI: 10.1021/acs.jctc.6b00362] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
20
Xie W, Xu M, Bai S, Shi Q. Mixed Quantum-Classical Study of Nonadiabatic Curve Crossing in Condensed Phases. J Phys Chem A 2016;120:3225-32. [DOI: 10.1021/acs.jpca.5b11695] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
21
Martinez F, Hanna G. Mixed Quantum-Classical Simulations of Transient Absorption Pump–Probe Signals for a Photo-Induced Electron Transfer Reaction Coupled to an Inner-Sphere Vibrational Mode. J Phys Chem A 2016;120:3196-205. [DOI: 10.1021/acs.jpca.5b11727] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
22
Shakib FA, Hanna G. New insights into the nonadiabatic state population dynamics of model proton-coupled electron transfer reactions from the mixed quantum-classical Liouville approach. J Chem Phys 2016;144:024110. [DOI: 10.1063/1.4939586] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]  Open
23
Dell’Angelo D, Hanna G. Self-Consistent Filtering Scheme for Efficient Calculations of Observables via the Mixed Quantum-Classical Liouville Approach. J Chem Theory Comput 2016;12:477-85. [DOI: 10.1021/acs.jctc.5b00991] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
24
Kapral R. Quantum dynamics in open quantum-classical systems. JOURNAL OF PHYSICS. CONDENSED MATTER : AN INSTITUTE OF PHYSICS JOURNAL 2015;27:073201. [PMID: 25634784 DOI: 10.1088/0953-8984/27/7/073201] [Citation(s) in RCA: 49] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
25
Sherman MC, Corcelli SA. Thermal equilibrium properties of surface hopping with an implicit Langevin bath. J Chem Phys 2015;142:024110. [DOI: 10.1063/1.4905253] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]  Open
26
Shakib FA, Hanna G. An analysis of model proton-coupled electron transfer reactions via the mixed quantum-classical Liouville approach. J Chem Phys 2014;141:044122. [DOI: 10.1063/1.4890915] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]  Open
27
Subotnik JE, Ouyang W, Landry BR. Can we derive Tully's surface-hopping algorithm from the semiclassical quantum Liouville equation? Almost, but only with decoherence. J Chem Phys 2014;139:214107. [PMID: 24320364 DOI: 10.1063/1.4829856] [Citation(s) in RCA: 133] [Impact Index Per Article: 13.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
28
Martinez F, Hanna G. Assessment of approximate solutions of the quantum–classical Liouville equation for dynamics simulations of quantum subsystems embedded in classical environments. MOLECULAR SIMULATION 2014. [DOI: 10.1080/08927022.2014.923573] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
29
Ouyang W, Subotnik JE. Estimating the entropy and quantifying the impurity of a swarm of surface-hopping trajectories: A new perspective on decoherence. J Chem Phys 2014;140:204102. [DOI: 10.1063/1.4876491] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]  Open
30
Xie W, Xu Y, Zhu L, Shi Q. Mixed quantum classical calculation of proton transfer reaction rates: From deep tunneling to over the barrier regimes. J Chem Phys 2014;140:174105. [DOI: 10.1063/1.4873135] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
31
Schwerdtfeger CA, Soudackov AV, Hammes-Schiffer S. Nonadiabatic dynamics of electron transfer in solution: Explicit and implicit solvent treatments that include multiple relaxation time scales. J Chem Phys 2014;140:034113. [DOI: 10.1063/1.4855295] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]  Open
32
Correlation Functions in Open Quantum-Classical Systems. ENTROPY 2013. [DOI: 10.3390/e16010200] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
33
Kwac K, Geva E. A Mixed Quantum-Classical Molecular Dynamics Study of anti-Tetrol and syn-Tetrol Dissolved in Liquid Chloroform II: Infrared Emission Spectra, Vibrational Excited-State Lifetimes, and Nonequilibrium Hydrogen-Bond Dynamics. J Phys Chem B 2013;117:14457-67. [DOI: 10.1021/jp408580n] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
34
Tomkins J, Hanna G. Signatures of nanoconfinement on the linear and nonlinear vibrational spectroscopy of a model hydrogen-bonded complex dissolved in a polar solvent. J Phys Chem B 2013;117:13619-30. [PMID: 24079369 DOI: 10.1021/jp407469f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
35
Sow CS, Tomkins J, Hanna G. Computational study of the one- and two-dimensional infrared spectra of a proton-transfer mode in a hydrogen-bonded complex dissolved in a polar nanocluster. Chemphyschem 2013;14:3309-18. [PMID: 23946271 DOI: 10.1002/cphc.201300610] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2013] [Indexed: 11/07/2022]
36
Uken DA, Sergi A, Petruccione F. Filtering schemes in the quantum-classical Liouville approach to nonadiabatic dynamics. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2013;88:033301. [PMID: 24125379 DOI: 10.1103/physreve.88.033301] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/21/2013] [Indexed: 06/02/2023]
37
Kelly A, Markland TE. Efficient and accurate surface hopping for long time nonadiabatic quantum dynamics. J Chem Phys 2013;139:014104. [DOI: 10.1063/1.4812355] [Citation(s) in RCA: 79] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]  Open
38
Abedi A, Agostini F, Suzuki Y, Gross EKU. Dynamical steps that bridge piecewise adiabatic shapes in the exact time-dependent potential energy surface. PHYSICAL REVIEW LETTERS 2013;110:263001. [PMID: 23848868 DOI: 10.1103/physrevlett.110.263001] [Citation(s) in RCA: 62] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/05/2013] [Indexed: 06/02/2023]
39
Kwac K, Geva E. A Mixed Quantum-Classical Molecular Dynamics Study of the Hydroxyl Stretch in Methanol/Carbon Tetrachloride Mixtures III: Nonequilibrium Hydrogen-Bond Dynamics and Infrared Pump–Probe Spectra. J Phys Chem B 2013;117:7737-49. [DOI: 10.1021/jp403726t] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
40
Martinez F, Rekik N, Hanna G. Simulation of nonlinear optical signals via approximate solutions of the quantum–classical Liouville equation: Application to the pump–probe spectroscopy of a condensed phase electron transfer reaction. Chem Phys Lett 2013. [DOI: 10.1016/j.cplett.2013.04.018] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
41
Rekik N, Hsieh CY, Freedman H, Hanna G. A mixed quantum-classical Liouville study of the population dynamics in a model photo-induced condensed phase electron transfer reaction. J Chem Phys 2013;138:144106. [DOI: 10.1063/1.4799272] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
42
Hsieh CY, Kapral R. Analysis of the forward-backward trajectory solution for the mixed quantum-classical Liouville equation. J Chem Phys 2013;138:134110. [DOI: 10.1063/1.4798221] [Citation(s) in RCA: 61] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
43
Habershon S, Manolopoulos DE, Markland TE, Miller TF. Ring-Polymer Molecular Dynamics: Quantum Effects in Chemical Dynamics from Classical Trajectories in an Extended Phase Space. Annu Rev Phys Chem 2013;64:387-413. [DOI: 10.1146/annurev-physchem-040412-110122] [Citation(s) in RCA: 448] [Impact Index Per Article: 40.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
44
Kelly A, van Zon R, Schofield J, Kapral R. Mapping quantum-classical Liouville equation: Projectors and trajectories. J Chem Phys 2012;136:084101. [DOI: 10.1063/1.3685420] [Citation(s) in RCA: 82] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
45
Kwac K, Geva E. Mixed quantum-classical molecular dynamics study of the hydroxyl stretch in methanol/carbon-tetrachloride mixtures II: excited state hydrogen bonding structure and dynamics, infrared emission spectrum, and excited state lifetime. J Phys Chem B 2012;116:2856-66. [PMID: 22283660 DOI: 10.1021/jp211792j] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
46
Ka BJ, Thompson WH. Sampling the Proton Transfer Reaction Coordinate in Mixed Quantum-Classical Molecular Dynamics Simulations. J Phys Chem A 2012;116:832-8. [DOI: 10.1021/jp206772e] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
47
ARTECA GUSTAVOA, RANK JEANPIERRE, TAPIA O. TOPOLOGICAL STUDY OF REACTIVE POTENTIAL-ENERGY SURFACES FROM MODEL DIABATIC STATES COUPLED TO SURROUNDING MEDIA. JOURNAL OF THEORETICAL & COMPUTATIONAL CHEMISTRY 2011. [DOI: 10.1142/s0219633607003350] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
48
Gelman D, Schwartz SD. Finite temperature application of the corrected propagator method to reactive dynamics in a condensed-phase environment. J Chem Phys 2011;134:034109. [PMID: 21261332 PMCID: PMC3041154 DOI: 10.1063/1.3545978] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2010] [Accepted: 01/04/2011] [Indexed: 12/14/2022]  Open
49
Nassimi A, Bonella S, Kapral R. Analysis of the quantum-classical Liouville equation in the mapping basis. J Chem Phys 2010;133:134115. [DOI: 10.1063/1.3480018] [Citation(s) in RCA: 54] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]  Open
50
Hanna G, Geva E. Signature of Nonadiabatic Transitions on the Pump−Probe Infrared Spectra of a Hydrogen-Bonded Complex Dissolved in a Polar Solvent: A Computational Study. J Phys Chem B 2010;115:5191-200. [DOI: 10.1021/jp1061495] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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