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For: Lu D, Liu Z, Wu J. Molecular dynamics for surfactant-assisted protein refolding. J Chem Phys 2007;126:064906. [PMID: 17313243 DOI: 10.1063/1.2409931] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
Number Cited by Other Article(s)
1
Poghosyan AH, Shahinyan AA, Kirakosyan GR, Ayvazyan NM, Mamasakhlisov YS, Papoian GA. A molecular dynamics study of protein denaturation induced by sulfonate-based surfactants. J Mol Model 2021;27:261. [PMID: 34432183 DOI: 10.1007/s00894-021-04882-2] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/25/2021] [Accepted: 08/18/2021] [Indexed: 10/20/2022]
2
Poghosyan AH, Schafer NP, Lyngsø J, Shahinyan AA, Pedersen JS, Otzen DE. Molecular dynamics study of ACBP denaturation in alkyl sulfates demonstrates possible pathways of unfolding through fused surfactant clusters. Protein Eng Des Sel 2019;32:175-190. [DOI: 10.1093/protein/gzz037] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2019] [Revised: 08/20/2019] [Accepted: 08/28/2019] [Indexed: 11/15/2022]  Open
3
Ahmed MF, Molla MR, Saha M, Shahriar I, Rahman MS, Halim MA, Rub MA, Hoque MA, Asiri AM. Aggregation behavior of cetyldimethylethylammonium bromide under the influence of bovine serum albumin in aqueous/electrolyte solutions at various temperatures and compositions: conductivity and molecular dynamics study. RSC Adv 2019;9:6556-6567. [PMID: 35518479 PMCID: PMC9060940 DOI: 10.1039/c9ra00070d] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2019] [Accepted: 02/15/2019] [Indexed: 11/21/2022]  Open
4
Nedergaard Pedersen J, Frederix PWJM, Skov Pedersen J, Marrink SJ, Otzen DE. Role of Charge and Hydrophobicity in Liprotide Formation: A Molecular Dynamics Study with Experimental Constraints. Chembiochem 2018;19:263-271. [PMID: 29156084 DOI: 10.1002/cbic.201700496] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2017] [Indexed: 12/15/2022]
5
Dominguez H. Interaction of the interleukin 8 protein with a sodium dodecyl sulfate micelle: A computer simulation study. J Mol Model 2017. [DOI: 10.1007/s00894-017-3386-9] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
6
Manjunath S, Satish Rao BS, Satyamoorthy K, Mahato KK. Laser induced autofluorescence in the monitoring of β-mercaptoethanol mediated photo induced proton coupled electron transfer in proteins. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2015;149:607-614. [PMID: 25985124 DOI: 10.1016/j.saa.2015.04.096] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/14/2014] [Revised: 03/18/2015] [Accepted: 04/22/2015] [Indexed: 06/04/2023]
7
Lu D, Yang C, Liu Z. How hydrophobicity and the glycosylation site of glycans affect protein folding and stability: a molecular dynamics simulation. J Phys Chem B 2011;116:390-400. [PMID: 22118044 DOI: 10.1021/jp203926r] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
8
Chen X, Dong W, Zhang X. Self-assembly of amphiphilic molecules: A review on the recent computer simulation results. Sci China Chem 2010. [DOI: 10.1007/s11426-010-4064-2] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
9
Kudou M, Yumioka R, Ejima D, Arakawa T, Tsumoto K. A novel protein refolding system using lauroyl-l-glutamate as a solubilizing detergent and arginine as a folding assisting agent. Protein Expr Purif 2010;75:46-54. [PMID: 20817098 DOI: 10.1016/j.pep.2010.08.011] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2010] [Revised: 08/23/2010] [Accepted: 08/26/2010] [Indexed: 11/26/2022]
10
Lu D, Wu J, Liu Z. Dynamic Control of Protein Folding Pathway with a Polymer of Tunable Hydrophobicity. J Phys Chem B 2007;111:12303-9. [PMID: 17914802 DOI: 10.1021/jp076043k] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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