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Vogt E, Kjaergaard HG. Vibrational Spectroscopy of the Water Dimer at Jet-Cooled and Atmospheric Temperatures. Annu Rev Phys Chem 2022; 73:209-231. [PMID: 35044791 DOI: 10.1146/annurev-physchem-082720-104659] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
The vibrational spectroscopy of the water dimer provides an understanding of basic hydrogen bonding in water clusters, and with about one water dimer for every 1,000 water molecules, it plays a critical role in atmospheric science. Here, we review how the experimental and theoretical progress of the past decades has improved our understanding of water dimer vibrational spectroscopy under both cold and warm conditions. We focus on the intramolecular OH-stretching transitions of the donor unit, because these are the ones mostly affected by dimer formation and because their assignment has proven a challenge. We review cold experimental results from early matrix isolation to recent mass-selected jet expansion techniques and, in parallel, the improvements in the theoretical anharmonic models. We discuss and illustrate changes in the vibrational spectra of complexes upon increasing temperature, and the difficulties in recording and calculating these spectra. In the atmosphere, water dimer spectra at ambient temperature are crucial. Expected final online publication date for the Annual Review of Physical Chemistry, Volume 73 is April 2022. Please see http://www.annualreviews.org/page/journal/pubdates for revised estimates.
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Affiliation(s)
- Emil Vogt
- Department of Chemistry, University of Copenhagen, Copenhagen, Denmark;
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2
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Hydrogen Delocalization in an Asymmetric Biomolecule: The Curious Case of Alpha-Fenchol. MOLECULES (BASEL, SWITZERLAND) 2021; 27:molecules27010101. [PMID: 35011331 PMCID: PMC8746872 DOI: 10.3390/molecules27010101] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/10/2021] [Revised: 12/11/2021] [Accepted: 12/15/2021] [Indexed: 12/31/2022]
Abstract
Rotational microwave jet spectroscopy studies of the monoterpenol α-fenchol have so far failed to identify its second most stable torsional conformer, despite computational predictions that it is only very slightly higher in energy than the global minimum. Vibrational FTIR and Raman jet spectroscopy investigations reveal unusually complex OH and OD stretching spectra compared to other alcohols. Via modeling of the torsional states, observed spectral splittings are explained by delocalization of the hydroxy hydrogen atom through quantum tunneling between the two non-equivalent but accidentally near-degenerate conformers separated by a low and narrow barrier. The energy differences between the torsional states are determined to be only 16(1) and 7(1) cm-1hc for the protiated and deuterated alcohol, respectively, which further shrink to 9(1) and 3(1) cm-1hc upon OH or OD stretch excitation. Comparisons are made with the more strongly asymmetric monoterpenols borneol and isopinocampheol as well as with the symmetric, rapidly tunneling propargyl alcohol. In addition, the third-in contrast localized-torsional conformer and the most stable dimer are assigned for α-fenchol, as well as the two most stable dimers for propargyl alcohol.
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Hansen AS, Huchmala RM, Vogt E, Boyer MA, Bhagde T, Vansco MF, Jensen CV, Kjærsgaard A, Kjaergaard HG, McCoy AB, Lester MI. Coupling of torsion and OH-stretching in tert-butyl hydroperoxide. I. The cold and warm first OH-stretching overtone spectrum. J Chem Phys 2021; 154:164306. [DOI: 10.1063/5.0048020] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Anne S. Hansen
- Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104-6323, USA
| | - Rachel M. Huchmala
- Department of Chemistry, University of Washington, Seattle, Washington 98195-1700, USA
| | - Emil Vogt
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, DK-2100 Copenhagen, Denmark
| | - Mark A. Boyer
- Department of Chemistry, University of Washington, Seattle, Washington 98195-1700, USA
| | - Trisha Bhagde
- Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104-6323, USA
| | - Michael F. Vansco
- Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104-6323, USA
| | - Casper V. Jensen
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, DK-2100 Copenhagen, Denmark
| | - Alexander Kjærsgaard
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, DK-2100 Copenhagen, Denmark
| | - Henrik G. Kjaergaard
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, DK-2100 Copenhagen, Denmark
| | - Anne B. McCoy
- Department of Chemistry, University of Washington, Seattle, Washington 98195-1700, USA
| | - Marsha I. Lester
- Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104-6323, USA
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Vogt E, Huchmala RM, Jensen CV, Boyer MA, Wallberg J, Hansen AS, Kjærsgaard A, Lester MI, McCoy AB, Kjaergaard HG. Coupling of torsion and OH-stretching in tert-butyl hydroperoxide. II. The OH-stretching fundamental and overtone spectra. J Chem Phys 2021; 154:164307. [DOI: 10.1063/5.0048022] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Emil Vogt
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, DK-2100 Copenhagen, Denmark
| | - Rachel M. Huchmala
- Department of Chemistry, University of Washington, Seattle, Washington 98195-1700, USA
| | - Casper V. Jensen
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, DK-2100 Copenhagen, Denmark
| | - Mark A. Boyer
- Department of Chemistry, University of Washington, Seattle, Washington 98195-1700, USA
| | - Jens Wallberg
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, DK-2100 Copenhagen, Denmark
| | - Anne S. Hansen
- Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104-6323, USA
| | - Alexander Kjærsgaard
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, DK-2100 Copenhagen, Denmark
| | - Marsha I. Lester
- Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104-6323, USA
| | - Anne B. McCoy
- Department of Chemistry, University of Washington, Seattle, Washington 98195-1700, USA
| | - Henrik G. Kjaergaard
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, DK-2100 Copenhagen, Denmark
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Medel R, Suhm MA. Predicting OH stretching fundamental wavenumbers of alcohols for conformational assignment: different correction patterns for density functional and wave-function-based methods. Phys Chem Chem Phys 2021; 23:5629-5643. [PMID: 33656038 DOI: 10.1039/d1cp00342a] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A model is presented for the prediction of OH stretching fundamental wavenumbers of alcohol conformers in the gas phase by application of a small set of empirical anharmonicity corrections to calculations in the harmonic approximation. In contrast to the popular application of a uniform scaling factor, the local chemical structure of the alcohol is taken into account to greatly improve accuracy. Interestingly, different correction patterns emerge for results of hybrid density functional (B3LYP-D3 and PBE0-D3) and wave-function-based methods (SCS-LMP2, LCCSD(T*)-F12a and CCSD(T)-F12a 1D). This raises questions about electronic structure deficiencies in these methods and differences in anharmonicity between alcohols. After its initial construction on the basis of literature assignments the model is tested with Raman jet spectroscopy of propargyl alcohol, cyclohexanol, borneol, isopinocampheol and 2-methylbutan-2-ol. For propargyl alcohol a spectral splitting attributed to tunneling is resolved. PBE0-D3 is identified as a well performing and broadly affordable electronic structure method for this model. A mean absolute error of 1.3 cm-1 and a maximum absolute error of 3 cm-1 result for 46 conformers of 24 alcohols in a 60 cm-1 range, when a single parameter is adjusted separately for each alcohol substitution class (methanol, primary, secondary, tertiary).
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Affiliation(s)
- Robert Medel
- Institute of Physical Chemistry, University of Goettingen, Tammannstr. 6, 37077 Goettingen, Germany.
| | - Martin A Suhm
- Institute of Physical Chemistry, University of Goettingen, Tammannstr. 6, 37077 Goettingen, Germany.
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Dzugan LC, Matthews J, Sinha A, McCoy AB. Role of Torsion-Vibration Coupling in the Overtone Spectrum and Vibrationally Mediated Photochemistry of CH3OOH and HOOH. J Phys Chem A 2017; 121:9262-9274. [DOI: 10.1021/acs.jpca.7b09778] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Laura C. Dzugan
- Department
of Chemistry and Biochemistry, The Ohio State University, Columbus, Ohio 43210, United States
| | - Jamie Matthews
- Analyst Research Laboratories, Ilan Ramon St. 2, Ness Ziona 7403635, Israel
| | - Amitabha Sinha
- Department
of Chemistry and Biochemistry, University of California, 9500 Gilman
Drive, La Jolla, San Diego, California 92093, United States
| | - Anne B. McCoy
- Department
of Chemistry, University of Washington, Seattle, Washington 98195, United States
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7
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Intramolecular hydrogen-bonding effects on O H stretch overtone excitation for fluorinated hydroperoxides. Chem Phys 2017. [DOI: 10.1016/j.chemphys.2017.03.003] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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Dalbouha S, Senent ML, Komiha N. Theoretical spectroscopic characterization at low temperatures of methyl hydroperoxide and three S-analogs. J Chem Phys 2015; 142:074304. [DOI: 10.1063/1.4907941] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Affiliation(s)
- S. Dalbouha
- Departamento de Química y Física Teóricas, Instituto de Estructura de la Materia, IEM-C.S.I.C., Serrano 121, Madrid 28006, Spain
| | - M. L. Senent
- Departamento de Química y Física Teóricas, Instituto de Estructura de la Materia, IEM-C.S.I.C., Serrano 121, Madrid 28006, Spain
| | - N. Komiha
- LS3ME-Équipe de Chimie Théorique et Modélisation, Faculté des Sciences, Université Mohamed V—Agdal, Rabat, Morocco
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Vaida V, Donaldson DJ. Red-light initiated atmospheric reactions of vibrationally excited molecules. Phys Chem Chem Phys 2014; 16:827-36. [DOI: 10.1039/c3cp53543f] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Hsieh S, Vushe R, Tun YT, Vallejo JL. Trends in organic hydroperoxide photodissociation and absorption cross sections between 266 and 377 nm. Chem Phys Lett 2014. [DOI: 10.1016/j.cplett.2013.11.008] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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11
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Hazra MK, Kuang X, Sinha A. Influence of Intramolecular Hydrogen Bonding on OH-Stretching Overtone Intensities and Band Positions in Peroxyacetic Acid. J Phys Chem A 2011; 116:5784-95. [DOI: 10.1021/jp206637t] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Affiliation(s)
- Montu K. Hazra
- Department of Chemistry and Biochemistry, University of California, San Diego La Jolla, California 92093-0314, United States
| | | | - Amitabha Sinha
- Department of Chemistry and Biochemistry, University of California, San Diego La Jolla, California 92093-0314, United States
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12
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Influence of initial parent vibrational excitation in promoting two-photon absorption in HOOH and CH3OOH. Chem Phys Lett 2011. [DOI: 10.1016/j.cplett.2011.06.089] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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13
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Hazra MK, Sinha A. Spectra and Integrated Band Intensities of the Low Order OH Stretching Overtones in Peroxyformic Acid: An Atmospheric Molecule with Prototypical Intramolecular Hydrogen Bonding. J Phys Chem A 2011; 115:5294-306. [DOI: 10.1021/jp112028c] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
Affiliation(s)
- Montu K. Hazra
- Department of Chemistry and Biochemistry, University of California, San Diego, La Jolla, California 92093-0314, United States
| | - Amitabha Sinha
- Department of Chemistry and Biochemistry, University of California, San Diego, La Jolla, California 92093-0314, United States
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Drozd GT, Melnichuk A, Donahue NM. The HOOH UV spectrum: importance of the transition dipole moment and torsional motion from semiclassical calculations on an ab initio potential energy surface. J Chem Phys 2010; 132:084304. [PMID: 20192299 DOI: 10.1063/1.3317438] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
The absorption cross section of HOOH, a starting point for larger ROOH, was calculated using the "Wigner method." Calculations use the Wigner transform of ground state wave functions and classical approximations for excited state wave functions. Potential energy and transition dipole moment surfaces were calculated using the equation-of-motion coupled-cluster singles and doubles method over an extended Franck-Condon region. The first two O-O stretches and the first five HOOH torsional levels are included. This study also addresses two fundamental questions about ROOH photodissociation. The long wavelength A(1)A:B(1)B excited state preference has been measured from dynamics experiments, but a Franck-Condon overlap explanation has not been directly verified. A moderate barrier to HOOH torsional motion and excited state dynamics affect the temperature dependence in the UV spectrum. Based on these initial findings for HOOH, photodissociation of large ROOH cannot be eliminated as an important factor for ozone and particulate matter production seen in both ambient and laboratory studies.
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Affiliation(s)
- Greg T Drozd
- Carnegie Mellon University, Pittsburgh, Pennsylvania 15213, USA
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Matthews J, Sinha A. Rotational Contour Analysis of Jet-Cooled Methyl Hydroperoxide Action Spectra in the Region of the 2νOH and 3νOH Bands. J Phys Chem A 2009; 113:13100-12. [DOI: 10.1021/jp902146z] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Jamie Matthews
- Department of Chemistry and Biochemistry, University of California—San Diego, 9500 Gilman Drive, La Jolla, California 92093-0314
| | - Amitabha Sinha
- Department of Chemistry and Biochemistry, University of California—San Diego, 9500 Gilman Drive, La Jolla, California 92093-0314
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